• 제목/요약/키워드: fundamental sequence

검색결과 191건 처리시간 0.02초

Maximum damage prediction for regular reinforced concrete frames under consecutive earthquakes

  • Amiri, Gholamreza Ghodrati;Rajabi, Elham
    • Earthquakes and Structures
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    • 제14권2호
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    • pp.129-142
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    • 2018
  • The current paper introduces a new approach for development of damage index to obtain the maximum damage in the reinforced concrete frames caused by as-recorded single and consecutive earthquakes. To do so, two sets of strong ground motions are selected based on maximum and approximately maximum peak ground acceleration (PGA) from "PEER" and "USGS" centers. Consecutive earthquakes in the first and second groups, not only occurred in similar directions and same stations, but also their real time gaps between successive shocks are less than 10 minutes and 10 days, respectively. In the following, a suite of six concrete moment resisting frames, including 3, 5, 7, 10, 12 and 15 stories, are designed in OpenSees software and analyzed for more than 850 times under two groups of as-recorded strong ground motion records with/without seismic sequences phenomena. The idealized multilayer artificial neural networks, with the least value of Mean Square Error (MSE) and maximum value of regression (R) between outputs and targets were then employed to generate the empirical charts and several correction equations for design utilization. To investigate the effectiveness of the proposed damage index, calibration of the new approach to existing real data (the result of Park-Ang damage index 1985), were conducted. The obtained results show good precision of the developed ANNs-based model in predicting the maximum damage of regular reinforced concrete frames.

太白山地區 망간鑛床에 있어서 酸化망간鑛物의 生成機構 (Mechanisms of Formation of Manganese Oxide Minerals in the Manganese Deposits of the Taebaeg Mt. Region, Korea)

  • 김수진;조현구;최헌수
    • 한국광물학회지
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    • 제5권1호
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    • pp.1-5
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    • 1992
  • 太白山地區의 主要 망간鑛床에서 産出하는 酸化망간 鑛物들은 一次的으로 생성된 炭酸망간 또는 珪酸망간의 表成風化作用에 依하여 生成되었다. 이들 酸化망간 鑛石의 生成에 관여된 地質作用에는 溶解作用, 酸化作用, 運搬作用, 沈澱作用, 晶出作用 및 再結晶作用 等이 있다. 그러나 箇箇의 酸化망간 鑛物 生成은 交代作用, 溶液으로부터의 晶出作用 및 固體狀態에서의 晶出, 및 再結晶作用 等에 依하여 이루어졌다. 이들 鑛物生成作用에 依하여 多樣한 名種 鑛石의 組職이 形成되었으며, 母鑛石의 鑛物組成과 風化環境에 따라 特徵的인 鑛物 및 鑛物共生關係가 形成되었다. 그러나 一般的으로 風化殘留鑛床 중의 酸化망간 鑛物들은 $Mn^{2+}{\to}Mn^{3+}{\to}Mn^{4+}$의 方向으로 生成되었다.

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An EST survey of genes expressed in liver of rock bream(Oplegnathus fasciatus) with particular interests on the stress-responsive and immune-related genes

  • Park, Byul-Nim;Park, Ji-Eun;Kim, Ki-Hong;Kim, Dong-Soo;Nam, Yoon-Kwon
    • 한국양식학회:학술대회논문집
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    • 한국양식학회 2003년도 추계학술발표대회 논문요약집
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    • pp.43-43
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    • 2003
  • EST analysis was performed to identify stress-responsive and immune-related genes from rock bream (Oplegnathus fasciatus). cDNA libraries were constructed with liver and randomly chosen 624 clones were subjected to automated sequence analysis. Of 624 clones sequenced in total, approximately 15% of ESTs was novel sequences (no match to GenBank) or sequences with high homology to hypothetical/unknown genes. The bioinforamtic sequence analysis including functional clustering, homology grouping, contig assembly with electronic northern and organism matches were carried out. Several potential stress-responsive biomarker and/or immune-related genes were identified in all the tissues examined. It included lectins, ferritins, CP450, proteinase, proteinase inhibitors, anti-oxidant enzymes, various heat-shock proteins, warm temperature acclimation protein, complements, methyltransferase, zinc finger proteins, lysozymes, macrophage maturation associated protein, and others. This information will offer new possibilities as fundamental baseline data for understanding and addressing their molecular mechanism involved in host defense and immune systems of this species.

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두툽상어에서 tissue inhibitor of matrix metalloproteinase-1 (TIMP-1) 유전자의 클로닝 (Cloning of a Tissue Inhibitor of Matrix Metalloproteinase-1 (TIMP-1) from a Scylliorhinus torazame)

  • 김차순;배수경;김규원;김영진
    • 생명과학회지
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    • 제6권4호
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    • pp.286-292
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    • 1996
  • Angiogenesis is a fundamental process by which new blood vessels are formed. It is essential in embryo development, and wound healing. Furthermore, malignant tumor growth and metastasis are also angiogenesis-dependent. In the catilage tissue, normal angiogenesis process is suppressed. In fact, it was reported that angiogenesis-inhibitory substances were isolated from the extracts of cow and shark catilage tissue. In order to isolate genes involved in the regulation of angiogenesis from a catilage fish, we constructed a shark cDNA library from Scylliohinus torazame. We then screened the library using hyman tissue inhibitor of matrix metalloproteinase-1 (TIMP-1) gene as a probe. Among the 4 X 10$^{4}$ plaques screened, we isolated 2 positive clones (T-1, T-2). Restriction enzyme analysis revealed that the T-1 clone contains 0.8 kb cDNA insert, and the T-2 clone contains 1.2 kb and 2.2 kb inserts, respectively. Further DNA sequence analysis shows that the DNA sequence of the T-1 clone is 53% homologous to that of the human TIMP-1 gene.

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Differently expressed genes of soybean by ambient heat stress

  • Jung, Inuk;Kim, Jin Hyeon;Jung, Woosuk
    • 한국작물학회:학술대회논문집
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    • 한국작물학회 2017년도 9th Asian Crop Science Association conference
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    • pp.156-156
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    • 2017
  • Plants are grown under constitutive changing of environmental conditions and response to external conditions at both protein and transcription level. The effects of heat on plant growth are broad and influence the yield directly. Heat stresses could be classified depend on intensity and duration. Fundamental changes of growth condition by climate change maybe or maybe not classified as a stress on plant growth. The effects of a short and unanticipated impact of elevated heat on plant could be different with those of under longer extension of ambient heat. To examine differently expressed gene sets by ambient heat stress of soybean, we grow the soybean in normal condition for three weeks. After that, soybean plants move to growth chamber. The temperature of growth chamber increase up to $9^{\circ}C$ for four days. We have extracted mRNA and micro RNA every 24 hours and carried RNA sequence analysis. We found major metabolic pathways affected by ambient heat stress. Mainly carbon metabolism, translation machinery and amino acid synthesis are affected. We discussed the expression patterns of genes of heat sensing and hormone responses.

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Development of EST-SSR markers for the Korean endemic species Chrysosplenium aureobracteatum (Saxifragaceae)

  • SHIN, Jae-Seo;KIM, Bo-Yun;KIM, Yong-In;LEE, Jung-Hoon;KIM, Young-Dong
    • 식물분류학회지
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    • 제50권1호
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    • pp.22-26
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    • 2020
  • Chrysosplenium aureobracteatum Y. I. Kim & Y. D. Kim (Saxifragaceae) is a recently described endemic species growing in the central part of the Korean peninsula. It requires constant monitoring for conservation due to its limited distributions. There is also a need for molecular markers for proper assessments of the genetic differentiation of C. aureobracteatum from species morphologically similar to it. In this study, we developed microsatellite markers that can be used to evaluate the genetic diversity of this species, representing fundamental data with which to conserve the natural populations of the species. A total of 17 expressed sequence tag-simple sequence repeat (EST-SSR) markers were developed by the Illumina pair-end sequencing of the transcriptomes of C. aureobracteatum. These markers were successfully applied to populations of C. aureobracteatum and to its most closely related species, C. barbatum, revealing high polymorphism in both species. The EST-SSR markers developed in this study were proven to be useful not only to monitor the population genetic structure of C. aureobracteatum for conservation purposes but also to study the genetic delimitation of the species from species closely related to it.

식용곤충 갈색거저리에서 분리한 카로테노이드 생성균주인 Pantoea intestinalis SRCM103226 균주의 유전체 해독 (Complete genome sequence of Pantoea intestinalis SRCM103226, a microbial C40 carotenoid zeaxanthin producer)

  • 김진원;하광수;정성엽;정도연
    • 미생물학회지
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    • 제55권2호
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    • pp.167-170
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    • 2019
  • Pantoea intestinalis SRCM103226은 식용곤충 밀웜으로부터 분리하였으며, zeaxanthin을 메인으로 생산하였다. P. intestinalis SRCM103226의 유전체 분석을 실시하여 4,784,919 bp 크기의 염기서열, GC 비율은 53.41%로 나타났으며, 플라스미드는 존재하지 않는다. RAST server를 이용하여 annotation한 결과 4,332개의 코딩유전자, 22개의 rRNA, 85개의 tRNA 유전자가 확인되었다 지놈분석결과 zeaxanthin 생합성회로 5개 유전자를 가지고 있다. 이러한 유전체 정보는 zeaxanthin 생합성 경로의 분자 진화의 비교 유전체학 연구에 대한 기초 정보를 제공한다.

SOME RESULTS OF MONOMIAL IDEALS ON REGULAR SEQUENCES

  • Naghipour, Reza;Vosughian, Somayeh
    • 대한수학회보
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    • 제58권3호
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    • pp.711-720
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    • 2021
  • Let R denote a commutative noetherian ring, and let 𝐱 := x1, …, xd be an R-regular sequence. Suppose that 𝖆 denotes a monomial ideal with respect to 𝐱. The first purpose of this article is to show that 𝖆 is irreducible if and only if 𝖆 is a generalized-parametric ideal. Next, it is shown that, for any integer n ≥ 1, (x1, …, xd)n = ⋂P(f), where the intersection (irredundant) is taken over all monomials f = xe11 ⋯ xedd such that deg(f) = n - 1 and P(f) := (xe1+11, ⋯, xed+1d). The second main result of this paper shows that if 𝖖 := (𝐱) is a prime ideal of R which is contained in the Jacobson radical of R and R is 𝖖-adically complete, then 𝖆 is a parameter ideal if and only if 𝖆 is a monomial irreducible ideal and Rad(𝖆) = 𝖖. In addition, if a is generated by monomials m1, …, mr, then Rad(𝖆), the radical of a, is also monomial and Rad(𝖆) = (ω1, …, ωr), where ωi = rad(mi) for all i = 1, …, r.

A Study on the Fundamental Cause of Stall Stagnation Phenomena in Surges in Compressor Systems

  • Yamaguchi, Nobuyuki
    • International Journal of Fluid Machinery and Systems
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    • 제10권2호
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    • pp.119-137
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    • 2017
  • Although the stall stagnation phenomena have often been experienced in site and also analytically in numerical experiments in surges in systems of compressors and flow paths, the fundamental causes have not been identified yet. In order to clarify the situations, behaviours of infinitesimal disturbance waves superposed on a main flow were studied in a simplified one-dimensional flow model. A ratio of the amplifying rate of the system instability to the characteristic slope of the compressor element was surveyed as the instability enhancement factor. Numerical calculations have shown the following tendency of the factor. In the situation where both the sectional area ratio and the length ratio of the delivery flow-path to the suction duct are sufficiently large, the enhancement factors are greater in magnitude, which means occurrence of ordinary deep surges. However, in the situation where the area ratio and/or the length ratio is relatively smaller, the enhancement factor tends to lessen significantly, which situation tends to suppress deep surges for the same value of the characteristic slope. It could result in the stall stagnation condition. In the domain of area ratio vs. length ratio of the delivery duct to the suction duct, contour-lines of the enhancement factor behave qualitatively similar to those of the stall stagnation boundaries of a fan analytically obtained, suggesting that a certain range of the enhancement factor values could specify the stagnation occurrence. The significant decreases in the factors are observed to accompany appearances of phase lags and travelling waves in the wave motions, which macroscopically suggests breaking down of the complete surge actions of filling and emptying of the air in the delivery duct. The strength of the action is deeply related with acoustic interferences and is evaluated in terms of the volume-modified reduced resonance frequency proposed by the author. These observations have shown the fundamental cause and the sequence of the stall stagnation in principle.

Multi-locus sequence typing을 이용한 한국에서 분리한 Candida glabrata 임상균주의 유전자 유형 분석 (Genetic Variations of Candida glabrata Clinical Isolates from Korea using Multi-locus Sequence Typing)

  • 강민지;이경은;진현우
    • 생명과학회지
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    • 제30권2호
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    • pp.122-128
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    • 2020
  • Candida albicans가 칸디다 혈증의 주요 원인 균으로 알려져 있지만, 최근에는 non-albicans Candida (NAC)에 의한 심각한 감염이 증가하고 있다. NAC 중에서 C. glabrata는 두 번째로 병원성을 나타내는 원인 균이지만 C. glabrata의 구조, 역학 등의 기본적인 연구는 거의 없는 실정이다. 따라서 본 연구에서는 다양한 유형의 임상 표본으로부터 분리된 총 102개의 C. glabrata균주로 multi-locus sequence typing (MLST)을 수행하였다. FKS, LEU2, NMT1, TRP1, UGP1 및 URA3을 포함한 6개의 하우스키핑 유전자를 증폭하여 염기서열을 분석하였다. 총 3,345개의 DNA 염기서열 중 49개의 가변 염기서열 부위가 발견되었으며, 그 결과 102개의 균주에서 총 12개의 상이한 서열 유형을 확인하였고, 알려지지 않은 서열 유형(USTs) 중 UST1이 가장 많이 나타났다. 이 연구의 결과는 국내 C. glabrata 항생제 처방에 도움이 될 것으로 사료되며, 한국에서 유행하는 C. glabrata에 대한 추가 연구를 위한 기본 역학자료로 사용될 것으로 기대한다.