• 제목/요약/키워드: effector analysis

검색결과 151건 처리시간 0.027초

Mini-review: oomycete RXLR genes as effector-triggered immunity

  • Arif, Saima;Jang, Hyun A;Kim, Mi-Reu;Oh, Sang-Keun
    • 농업과학연구
    • /
    • 제45권4호
    • /
    • pp.561-573
    • /
    • 2018
  • Oomycetes are known to secrete a vast arsenal of effectors that modulate the host defense system as well as facilitate establishing a parasitic infection in plants. In recent years, tremendous progress has been made in the field of effectromics based on studies of oomycetes, especially the cytoplasmic family of RXLR effectors. Yet, the biology of the RXLR effector family is still poorly understood. There has been a consensus regarding the structure of the RXLR motif in the mycologist community. However, the function of the RXLR motif is still unclear. First, different models have suggested that the role of the RXLR motif is either in translocation to a target destination inside a host cell or in the cleavage of itself followed by secretion. Second, recent studies have suggested different functional models for the RXLR motif. According to a widely accepted model, the RXLR motif is directly involved in the translocation of effectors to target sites. In contrast, a new study has proposed that the RXLR motif is involved in secretion rather than translocation. Thus, this review is an attempt to summarize the recent advances made in the functional analysis of the N-terminal domain of RXLR effectors.

PHC 파일 두부정리 자동화 장비의 말단장치 개발 (Development of the End-effector for Developing a PHC Pile Cutting and Crushing Machine)

  • 이정호;김영석;조문영;김성근;성낙원
    • 한국건설관리학회:학술대회논문집
    • /
    • 한국건설관리학회 2004년도 제5회 정기학술발표대회 논문집
    • /
    • pp.531-534
    • /
    • 2004
  • 재래식 두부정리 작업은 노동 집약적이며 노무자간의 숙련도 차이에 의해 품질 및 작업 생산성이 크게 영향을 받고 있다. 국내 $\cdot$ 외에서는 두부정리 작업의 생산성 및 안전성, 품질을 향상시키기 위해 자동화 장비를 개발 중에 있으나 기존에 개발된 두부정리 자동화 장비는 파일 파쇄 작업만을 자동화 대상으로 하고 있고, PHC 파일에 종방향 균열을 발생시켜 두부정리 작업의 품질을 크게 저하시키고 있는 실정이었다. 기존 두부정리 자동화 장비가 PHC 파일에 종방향 균열을 발생시키는 원인은 PHC 파일의 물리적 특성을 고려한 자동화 장비 말단장치의 설계 및 제작, 배치가 제대로 이루어지지 못한 것으로 분석되었다. 따라서, 본 연구에서는 기존에 개발된 두부정리 자동화 장비 및 본 연구를 통해 현재까지 개발된 두부정리 자동화 장비 파일롯타입의 실험결과를 토대로 PHC 파일을 종방향 균열 없이 효과적으로 파쇄할 수 있는 두부정리 자동화 장비 프로토타입의 말단장치를 개발하고자 한다.

  • PDF

2 자유도 병렬형 매니퓰레이터의 지역 성능지수에 관한 연구 (Study of Local Performance Index of 2-DOF Parallel Manipulator)

  • 이종규;양승한;이상룡;이춘영
    • 대한기계학회논문집A
    • /
    • 제37권1호
    • /
    • pp.89-95
    • /
    • 2013
  • 본 연구에서 병렬형 매니퓰레이터는 두 개의 평행판 위를 움직이는 슬라이더와 말단장치가 임의로 조정될 수 있는 링크를 가지고 있고, 두 개의 슬라이더에 각각 연결된 링크는 커플링운동을 한다. 매니퓰레이터의 정기구학 및 역기구학 해석을 통하여 슬라이더의 위치 및 말단장치의 위치 사이의 관계식을 나타내는 변위방정식을 유도하고, 유도된 방정식으로부터 정기구학 및 역기구학의 자코비안 행렬들을 구한다. 이러한 행렬들을 이용하여 매니퓰레이터의 지역 성능지수를 제안한다. 성능지수의 시뮬레이션 결과로부터, 매니퓰레이터는 한 사분면에서만 원활한 운동을 할 수 있고, 링크 길이 비와 말단장치의 자세가 최대 성능지수가 분포하는 영역의 변화에 중대한 영향을 미친다.

The change of Phytophthora infestans Populations in South Korea using Traditional Markers and Genome Analyses

  • Do Hee Kwon;Jin Hee Seo;Yong Ik Jin;Gun Ho Jung;Jang Gyu Choi;Gyu Bin Lee;Kwang Ryong Jo;Jaeyoun Yi;Hwang Bae Sohn;Young Eun Park
    • 한국작물학회:학술대회논문집
    • /
    • 한국작물학회 2022년도 추계학술대회
    • /
    • pp.257-257
    • /
    • 2022
  • Late blight, caused by the hemibiotrophic oomycete pathogen Phytophthora infestans, has been the most important disease limiting potato production worldwide. P. infestans undergo major population shifts in agricultural systems via the successive emergence and migration of asexual lineages. The phenotypic and genotypic bases of these selective sweeps are largely unknown but management strategies need to adapt to reflect the changing pathogen population. Here, we used molecular markers to divide the 86 South Korea isolates into six clonal lineages: KR_1_A1, KR_2_A2, SIB-1, US-11, SIB-1 like, and KR-2 like. We documented the emergence of a new lineage, termed SIB-1 like, and KR-2 like, and their rapid replacement of other lineages to exceed 35% of the pathogen population across South Korea. Genome analyses of the Korean P. infestans populations revealed extensive genetic polymorphism, particularly in effector genes. Importantly, SIB-1 like isolates carry an intact Avr8 effector gene that triggers resistance in potato carrying the corresponding R immune receptor gene R8 cloned from Solarium demissum. These findings point toward a strategy for deploying genetic resistance to mitigate the impact of the SIB-1 like lineage and illustrate how pathogen population monitoring, combined with genome analysis, informs the management of devastating disease epidemics. Further study is being done on pathogenicity of the SIB-1 like isolates on cultivated potatoes and changes in expression patterns of disease effector genes within the SIB-1 like isolates

  • PDF

DNA Microarray Analysis of Immediate Response to EGF Treatment in Rat Schwannoma Cells

  • OH, Min-Kyu;Scoles, Daniel R.;Pulst, Stefan-M.
    • Biotechnology and Bioprocess Engineering:BBE
    • /
    • 제10권5호
    • /
    • pp.444-450
    • /
    • 2005
  • Epidermal growth factor (EGF) activates many intracellular effector molecules, which subsequently influence the expression levels of many genes involved in cell growth, apoptosis and signal transduction, etc. In this study, the early response of gene expressions due to EGF treatment was monitored using oligonucleotide DNA microarrays in rat schwannoma cell lines. An immunoblotting experiment showed the successful activation of EGF receptors and an effector protein, STAT5, due to EGF treatment. The microarray study showed that 35 genes were significantly induced and 2 were repressed within 60 min after the treatment. The list of induced genes included early growth response 1, suppressor of cytokine signaling 3, c-fos, interferon regulatory factor 1 and early growth response 2, etc. According to the microarray data, six of these were induced by more than 10-fold, and showed at least two different induction patterns, indicating complicated regulatory mechanisms in the EGF signal transduction.

Trajectory Tracking Performance Analysis of Underwater Manipulator for Autonomous Manipulation

  • Chae, Junbo;Yeu, Taekyeong;Lee, Yeongjun;Lee, Yoongeon;Yoon, Suk-Min
    • 한국해양공학회지
    • /
    • 제34권3호
    • /
    • pp.180-193
    • /
    • 2020
  • In this study, the end-effector tracking performance of a manipulator installed on a remotely operated vehicle (ROV) for autonomous underwater intervention is verified. The underwater manipulator is an ARM 7E MINI model produced by the ECA group, which consists of six joints and one gripper. Of the six joints of the manipulator, two are revolute joints and the other four are prismatic joints. Velocity control is used to control the manipulator with forward and inverse kinematics. When the manipulator approaches a target object, it is difficult for the ROV to maintain its position and posture, owing to various disturbances, such as the variation in both the center of mass and the reaction force resulting from the manipulator motion. Therefore, it is necessary to compensate for the influences and ensure the relative distance to the object. Simulations and experiments are performed to track the trajectory of a virtual object, and the tracking performance is verified from the results.

Sucrose Regulates Growth and Activation of Rubisco in Tobacco Leaves In Vitro

  • Roh, Kwang-Soo;Park, Bok-Youl
    • Biotechnology and Bioprocess Engineering:BBE
    • /
    • 제9권3호
    • /
    • pp.229-235
    • /
    • 2004
  • The influence of sucrose on in vitro growth, chlorophyll content, and rubisco/rubisco activase were studied in tobacco leaves. The most pronounced effect on in vitro growth and the chlorophyll content was found at 4% sucrose. The rubisco content increased with increasing concentrations of sucrose, but a point was reached beyond which the increasing concentrations of sucrose caused an inhibition of this enzyme. The rubisco activity showed patterns of change similar to the rubisco content. These data suggest that sucrose may have an affect on the activation and induction of rubisco and that sucrose can be both a positive effector and negative effector depend on its concentration. The degree of intensity of 55 and 15 kD polypeptides, which were identified as the large and small subunit of rubisco, respectively, by SDS-PAGE analysis at 4% sucrose was significantly higher than that of other treatments, indicating that sucrose had an effect on both subunits. We subsequently examined whether the rubisco content and activity of being induced by sucrose is associated with rubisco activase. The rubisco activase content at 4% sucrose was higher than that of other treatments. A similar change pattern was also observed in the activity of rubisco activase. The intensity of two 52 and 51 kD polypeptide bands at 4% sucrose was higher than that of corresponding bands of other treatments. The stimulatory and inhibitory effects of rubisco by sucrose seemed to be caused by rubisco activase.

산업용 FANUC robot의 빠른 역기구학에 관한 연구 (A fast inverse kinematic analysis of industrial FANUC robot)

  • 박형준;전종욱;이쾌희
    • 제어로봇시스템학회:학술대회논문집
    • /
    • 제어로봇시스템학회 1992년도 한국자동제어학술회의논문집(국내학술편); KOEX, Seoul; 19-21 Oct. 1992
    • /
    • pp.953-958
    • /
    • 1992
  • This paper deals with the solution of inverse kinematics of the industrial FANUC robot with IBM PC386. The inverse kinematics of FANUC robot cannot be solved by the algebraical method, because arm matirix T$_{6}$ is very complex and 6-joint angles are associated with the position and the approach of end-effector. Instead we fuund otehr 5-joint angle by and algebraical method after finding .THETA.$_{1}$ value by a numerical method.d.

  • PDF

인체유암세포주 MCF-7의 형태변화와 증식에 영향을 주는 항암활성물질, MCS-202 (Antitumoral Compound, MCS-202, an Effector on Proliferation and Morphology of Human Breast Tumor Cell Line, MCF-7)

  • 이성우;김세은;김항섭;김환묵;이정준;김영호
    • 한국미생물·생명공학회지
    • /
    • 제21권6호
    • /
    • pp.594-599
    • /
    • 1993
  • In the course of screening for microbial metabolites employing human cancer cell line, we identified a mycelial extract of Streptomyces sp. 1365, which are effective on growth inhibition and morphological change of MCF-7, human breasr cancer cell line. By repeased column chromatography and recrystallization process, yellow needle crystals were obtained as an active compound and identified as resistomycin by spectral analysis.

  • PDF

Allicin-induced apoptosis of gastric epithelial cells is associated with changes of caspase-independent effector and involvement of PKA

  • Baeg, Hye-Kyoung;Rhee, Dong-Kwon;Pho, Suhk-Neung
    • 대한약학회:학술대회논문집
    • /
    • 대한약학회 2003년도 Proceedings of the Convention of the Pharmaceutical Society of Korea Vol.2-2
    • /
    • pp.166.2-166.2
    • /
    • 2003
  • Garlic (Allium sativum) has been used as a general food and a remedy in Oriental for a long time. Since garlic compounds have been also shown to inhibit growth of tumors and to modulate the activity of carcinogenesis, the effects of allicin on growth and survival in human gastric epithelial cells were evaluated by cell viability, cell cycle analysis and DNA fragmentation. Protein levels of cytochrome C, Bcl-xL, Bax and AIF were detected by Western blotting. Effects of recombinant VacA on caspase proteases activity were also determined. (omitted)

  • PDF