• 제목/요약/키워드: crystal gene

검색결과 105건 처리시간 0.026초

Identification and Molecular Characterization of Insecticidal cryl-type Genes from Bacillus thuringiensis 2385-1

  • Li, Ming-Shun;Park, Jae-Young;Roh, Jong-Yul;Shim, Hee-Jin;Boo, Kyung-Saeng;Je, Yeon-Ho
    • 한국잠사학회:학술대회논문집
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    • 한국잠사학회 2003년도 International Symposium of Silkworm/Insect Biotechnology and Annual Meeting of Korea Society of Sericultural Science
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    • pp.114-115
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    • 2003
  • A Bacillus thuringiensis isolate, Bt 2385-1, which showed toxicity to lepidopteran, was isolated from Korean soil sample and characterized. PCR-RFLP showed that this isolate contains two novel cryl-type crystal protein genes. In this study, we designed cryl-type specific primer set (ATG1-F and N400-R) to clone the toxic domain of the all cryl-type genes. The two novel rlyl-type toxin genes in addition to crylJal gene were cloned and sequenced. (omitted)

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Detection of cryIB Genes in Bacillus thuringiensis subsp. entomocidus and subsp. subtoxicus

  • CHOI, SOO KEUN;BYUNG SIK SHIN;BON TAG KOO;SEUNG HWAN PARK;AND JEONG IL KIM
    • Journal of Microbiology and Biotechnology
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    • 제4권3호
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    • pp.171-175
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    • 1994
  • To find new crystal protein genes, we screened 42 Bacillus thuringiensis strains of serovar standards by Southern hybridization with a cryI-specific probe which was amplified from B. thuringiensis subsp. kurstaki HDl by polymerase chain reaction (PCR). Two strains, B. thuringiensis subsp. entomocidus HD9 and subsp. subtoxicus HD109, generated weak signals under the low-stringency hybridization conditions. Further analysis with Southern hybridization revealed that the two strains contained cryIB genes which are slightly different from those of B. thuringiensis subsp. thuringiensis HD2. These results were confirmed by PCR with cryIB-specific primers followed by the restriction analysis of PCR products.

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Histone Deactylase Inhibitors as Novel Target for Cancer, Diabetes, and Inflammation

  • Singh, Parul;Madhavan, Thirumurthy
    • 통합자연과학논문집
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    • 제6권1호
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    • pp.57-63
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    • 2013
  • Histone deacetylase (HDACs) is an enzyme family that deacetylates histones and non-histones protein. Availability of crystal structure of HDAC8 has been a boosting factor to generate target based inhibitors. Hydroxamic class is the most studied one to generate potent inhibitors. HDAC class I and class II enzymes are emerging as a therapeutic target for cancer, diabetes, inflammation and other diseases. DNA methylation and histone modification are epigenetic mechanism, is important for the regulation of cellular functions. HDACs enzymes play essential role in gene transcription to regulate cell proliferation, migration and death. The aim of this article is to provide a comprehensive overview about structure and function of HDACs enzymes, histone deacetylase inhibitors (HDACi) and HDACs enzymes as a therapeutic target for cancer, inflammation and diabetes.

Synthesis and Characterization of Polygamies and Their Metal Complexes

  • Jang, Gyu-Hwan;Kim, Yang;Lee, Man-Kil
    • 대한약학회:학술대회논문집
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    • 대한약학회 2002년도 Proceedings of the Convention of the Pharmaceutical Society of Korea Vol.2
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    • pp.346.3-346.3
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    • 2002
  • The polyamine pathway represents a logical target for chemotherapeutic intervention, since depletion of polyamines results in the disruption of a variety of cellular functions, and may in specific cases result in cytotoxicity. Polyamine interaction with DNA has also long been thought to be an important function of the natural polyamines and as more is learned about the specific interactions and the resultant conformational changes which can be influenced by the polyamine binding to DNA the potential for regional and gene-specific changes are becoming more evident. We have prepraed the elaborate polyamines by the reaction of simpler polyamines with polyalkyating agents. Synthesized polyamines were separated and purified by metal complex formation and ion-exchange chromatography. They were characterized by X-ray crystal structure determinations of their metal complexes.

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Optimization of Dual Layer Phoswich Detector for Small Animal PET using Monte Carlo Simulation

  • Y.H. Chung;Park, Y.;G. Cho;Y.S. Choe;Lee, K.H.;Kim, S.E.;Kim, B.T.
    • 한국의학물리학회:학술대회논문집
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    • 한국의학물리학회 2003년도 제27회 추계학술대회
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    • pp.44-44
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    • 2003
  • As a basic measurement tool in the areas of animal models of human disease, gene expression and therapy, and drug discovery and development, small animal PET imaging is being used increasingly. An ideal small animal PET should have high sensitivity and high and uniform resolution across the field of view to achieve high image quality. However, the combination of long narrow pixellated crystal array and small ring diameter of small animal PET leads to the degradation of spatial resolution for the source located at off center. This degradation of resolution can be improved by determining the depth of interaction (DOI) in the crystal and by taking into account the information in sorting the coincident events. Among a number of 001 identification schemes, dual layer phsowich detector has been widely investigated by many research groups due to its practicability and effectiveness on extracting DOI information. However, the effects of each crystal length composing dual layer phoswich detector on DOI measurements and image qualities were not fully characterized. In order to minimize the DOI effect, the length of each layer of phoswich detector should be optimized. The aim of this study was to perform simulations using a simulation tool, GATE to design the optimum lengths of crystals composing a dual layer phoswich detector. The simulated small PET system employed LSO front layer LuYAP back layer phoswich detector modules and the module consisted of 8${\times}$8 arrays of dual layer crystals with 2 mm ${\times}$ 2 mm sensitive area coupled to a Hamamatsu R7600 00 M64 PSPMT. Sensitivities and variation of radial resolutions were simulated by varying the length of LSO front layer from 0 to 10 mm while the total length (LSO + LuYAP) was fixed to 20 mm for 10 cm diameter ring scanner. The radial resolution uniformity was markedly improved by using DOI information. There existed the optimal lengths of crystal layers to minimize the variation of radial resolutions. In 10 cm ring scanner configuration, the radial resolution was kept below 3.4 mm over 8 cm FOV while the sensitivity was higher than 7.4% for LSO 5 mm : LuYAP 15 mm phoswich detector. In this study, the optimal length of dual layer phoswich detector was derived to achieve high and uniform radial resolution.

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Isolation and Characterization of Two Mosquitocidal Bacillus thuringien- sis Strains Belonging to subsp. kurstaki and subsp. aizawai

  • Roh, Jong-Yul;Li, Ming-Shun;Chang, Jin-Hee;Shim, Hee-Jin;Jin, Byung-Rae;Je, Yeon-Ho
    • International Journal of Industrial Entomology and Biomaterials
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    • 제3권1호
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    • pp.19-23
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    • 2001
  • Two B. thuringiensis strains, which possess mosquitocidal activities, were isolated from Korean soil samples and named K-1205-1 and K-1381-1. Serological studies indicated that K-1205-1 and K-1381-1 belonged to B. thuringiensis subsp. kurstaki (H3a3b3c) and subsp. aizawai (H7), respectively. K-1205-1 produced typical bipyramidal parasporal inclusions, but K-1381-1 produced irregular bipyramidal shape. Total plasmid DNA patterns analysis shewed that K-1205-1 and K- 1381-1 were different from their reference strains, subsp. kurstaki and subsp. aizawai, respectively, in high molecules, whereas their crystal protein patterns showed no difference. The cry gene contents of K-1205-1 and K-1381-1 were identical with those of the reference strains. Mosquitocidal activities of crystal proteins produced by K-1205-1 and K-1381-1 were significantly high by about 40-50 folds at $LC_50$ when compared to those of subsp. kurstaki and subsp. aizawai. Finally, in southern blot analysis using cry1A-type specific probe, K-1205-1 and K-1381-1 had different bands from subsp. kurstaki and subsp. aizawai, respectively. In conclusion, our results suggest that K-1205-1 and K-1381-1 appear to be new moquitocidal B. thuringiensis strains isolated from Korean soil.

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새로운 곤충병원성 Bacillus thuringiensis subsp. aizawai 균주의 유전학적 특성 (Genetic characteristics of the novel insect pathogenic Bacillus thuringiensis subsp. aizawai strain)

  • 서미자;윤영남;유용만;김기수
    • 농업과학연구
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    • 제41권4호
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    • pp.351-359
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    • 2014
  • For identifying the plasmid DNA coding cry gene of Bacillus thuringiensis subsp. aizawai KB098 with high insecticidal activity against Spodoptera exigua, mutant isolates with no crystal protein were produced by $42^{\circ}C$ incubation condition and then mutant plasmid DNA band patterns were compared with those of KB098. KB098 isolates had 4 cry genes, cry1Aa, cry1Ab, cry1C, cry1D, and also had been found seven plasmid DNA. Though the SDS-PAGE experiment, it was confirmed that mutant didn't produce 130~145kDa protein band involved in bipyramidal shape crystal. Also, five mutant isolates had no cry genes coding plasmid DNA in PCR. In result of comparison the plasmid DNA of KB098 and 5 mutant isolates, only 1 plasmid DNA band was left out in mutant plasmid DNA pattern, so that the missing band was extracted from the gel. The missing(disappeared) plasmid DNA was the largest molecular size among the 7 plasmid DNA of KB098 and it was also confirmed this plasmid DNA had all 4 cry genes through PCR.

Presence of Transgenic Genes and Proteins in Commercial Soybean Foods from Mexican Grocery Stores

  • Cruz-Flores, Yendi Arely;Rodriguez-Herrera, Raul;Aguilar-Gonzalez, Cristobal Noe;Contreras-Esquivel, Juan Carlos;Reyes-Vega, Maria de la Luz
    • Food Science and Biotechnology
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    • 제17권5호
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    • pp.1092-1096
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    • 2008
  • Commercial food products from major cities of Coahuila, Mexico were screened to identify residues of transgenic deoxyribonucleic acid (DNA) and/or proteins. After performed, an inventory on all products that contained a soybean-based ingredient in a commercial grocery store in the city of Saltillo, Coahuila, Mexico, 245 food products were identified and grouped in 15 classes according to the soybean ingredient as well as the manufacturing process used for their elaboration. Similar sampling was made for the different food classes in the cities of Monclova, Piedras Negras, and Torreon. A total of 88 samples were analyzed and DNA was extracted by the hexadecyltrimethyl-ammonium bromide (CTAB) technique with slight modification to obtain better DNA quality (1). In addition, segments of the transgenic genes one that codifies for 5-enolpyruvylshikimate-3-phosphate synthase (epsps), cry 1A, and the cauliflower mosaic virus (CaMV) promoter were amplified using polymerase chain reaction (PCR). The transgenic proteins 5-enolpyruvylshikimate-3-phosphate synthase (CP4 EPSPS) and insecticidal crystal protein (Cry 1Ab/Ac) were identified using double antibody sandwich-enzymatic linked immunoassay analysis (DAS-ELISA). Presence of transgenic genes and/or proteins was identified in 35.3% of the commercial products samples.

Z-3-파라-톨릴치오-4-니트로-3-헥센의 결정 및 분자구조 (The Crystal and Molecular Structure of Z-3-P-Tolylthio-4-Nitro-3-Hexene)

  • 안중태
    • 대한화학회지
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    • 제34권2호
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    • pp.130-135
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    • 1990
  • Z-3-파라-톨리치오-4-니트로-3-헥센의 결정은 단사정계에 속하며 a = 13.756 (3), b = 9.310(4), c = 21.305(3) $\AA$, $\beta = 95.0_{\circ}$이며 단위세포안에 8개의 분자가 있으며 2.0$\sigma$(I) 보다 큰 강도를 가진 2935개의 회절반점에 대하여 계단식 대각 최서자승법에 의하여 정밀화된 최종 R값은 0.085이다. 직접법에 의하여 구조를 풀었으며 C-H결합길이와 메칠기는 길이를 고정시켜 이상적인 기하학적구조에 맞도록 하여 계산을 정밀화하였다. 두 분자 A와 B는 끝의 두 에칠기를 제외하고는 거의 유사한 구조를 갖고 있다. 니트로기를 포함한 에틸렌 모양의 골격은 메칠벤젠기에 거의 수직으로 되어 있으며 두 에틸기는 시스-형 구조를 가지고 있으나 끝부분의 메칠기는 A분자에서는 그의 골격에 대해 서로 반대방향으로 향하고 있고 B분자는 같은 방향으로 향하고 있다. 결정내 분자들은 비결합성 van der Waals힘으로 쌓여져 있다.

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Bacillus thuringiensis var kurstaki HD-1의 내독소 단백질 유전에 관여하는 plasmid의 결정 (Determination of Plasmids Encoding Crystal Toxic Protein Gene in Bacillus thuringiensis var kurstaki HD-1)

  • 김철영;김상현
    • 한국잠사곤충학회지
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    • 제35권2호
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    • pp.120-128
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    • 1993
  • B. t k HD-1 균주에 0.002% SDS와 0.5$\mu$g/ml EtBr을 처리한 결과, 9개의 cry- 변이균주를 분리하였으며 또한 B. t k HD-1균주와 B. cereus 569균주를 혼합배양하는 방법으로 mating 실험을 수행하여 B. t k HD-1으로부터 일부 plasmid가 전이된 11개의 cry+ B. cereus와 2개의 cry=B. cereus를 분리하고 plasmid수와 분자량을 조사하였다. B. t k HD-1의 경우 9개의 plasmid가 존재하였고 일부 plasmid가 curing된 B. t k HD-1변이균주의 경우 29Md plasmid나 44Md plasmid가 반드시 존재하였으나, cry- 변이균주에는 29Md 이상의 모든 plasmid가 소실되어 내독소 단백질 합성에 관여하는 유전자가 기억된 plamid를 결정하였다.

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