• Title/Summary/Keyword: crop discrimination

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Applications of molecular markers in the discrimination of Panax species and Korean ginseng cultivars (Panax ginseng)

  • Jo, Ick Hyun;Kim, Young Chang;Kim, Dong Hwi;Kim, Kee Hong;Hyun, Tae Kyung;Ryu, Hojin;Bang, Kyong Hwan
    • Journal of Ginseng Research
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    • v.41 no.4
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    • pp.444-449
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    • 2017
  • The development of molecular markers is one of the most useful methods for molecular breeding and marker-based molecular associated selections. Even though there is less information on the reference genome, molecular markers are indispensable tools for determination of genetic variation and identification of species with high levels of accuracy and reproducibility. The demand for molecular approaches for marker-based breeding and genetic discriminations in Panax species has greatly increased in recent times and has been successfully applied for various purposes. However, owing to the existence of diverse molecular techniques and differences in their principles and applications, there should be careful consideration while selecting appropriate marker types. In this review, we outline the recent status of different molecular marker applications in ginseng research and industrial fields. In addition, we discuss the basic principles, requirements, and advantages and disadvantages of the most widely used molecular markers, including restriction fragment length polymorphism, random amplified polymorphic DNA, sequence tag sites, simple sequence repeats, and single nucleotide polymorphisms.

Use of OSMI(Ocean Scanning Multi-spectral Imager) Wave Bands for Agricultural Applications

  • Hong, Suk-Young;Rim, Sang-Kyu;Jung, Won-Kyo
    • Proceedings of the KSRS Conference
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    • 1999.11a
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    • pp.396-402
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    • 1999
  • The aim of this study is to assess the OSMI (Ocean Scanning Multi-spectral Imager), whose central bands are 443nm, 490nm, 510nm, 555nm, 670nm, and 865nm, for agricultural applications. Radiance measurements, used to determine per cent reflectance of canopies and soils, were acquired with spectro-radiometers (Li-1800;330~1,100nm, GER-SFOV;350 ~2,500nm, and MSR-7000; 300~2,500nm) in situ for crops and indoors for soils. OSMI equivalent bands and their ratio values were prepared(20nm interval for bands 1~5; 4nm interval for band 6) by averaging spectral reflectance values to the real OSMI bands and analyzed as to crop growth parameters, leaf area index (LAI), total dry matter, and growth index in crops and physiochemical properties in soils. Spectral variations for each growth stage in rice and for crop discrimination in upland crops were significant statistically. In soils, clay and water content, CEC (Cation Exchange Capacity), free iron oxide, and some cation content were correlated with the OSMI equivalent bands. The result of this study shows OSMI wave bands would be promising for agricultural application in terms of spectral information and resolution.

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A Field Experiment Study on the Use of OSMI Wave Bands for Agricultural Applications

  • Hong, Suk-Young;Rim, Sang-Kyu;Jung, Won-Kyo
    • Korean Journal of Remote Sensing
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    • v.15 no.4
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    • pp.307-319
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    • 1999
  • The aim of this study is to assess the OSMI (Ocean Scanning Multi-spectral Imager), whose central bands are 443nm, 490nm, 510nm, 555nm, 670nm, and 865nm, for agricultural applications. Radiance measurements, used to determine per cent reflectance of canopies and soils, were acquired with spectro-radiometers (Li-1800;330∼1,100nm, GER-SFOV;350∼2,500nm, and MSR-7000; 300∼2,500nm) in situ for crops and indoors for soils. OSMI equivalent bands and their ratio values were prepared(20nm interval for bands 1∼5; 40nm interval for band 6) by averaging spectral reflectance values to the real OSMI bands and analyzed as to crop growth parameters, leaf area index (LAI), total dry matter, and growth index in crops and physiochemical properties in soils. Spectral variations for each growth stage in rice and for crop discrimination in upland crops were significant statistically. In soils, clay and water content, CEC (Cation Exchange Capacity), free iron oxide, and some cation content were correlated with the OSMI equivalent bands. The result of this study shows OSMI wave bands would be promising for agricultural application in terms of spectral information and resolution.

Distinguishing the Korean Silage Corn Varieties through Development of PCR-Based SNP Marker (SNP마커 개발을 통한 사료용 옥수수 품종판별)

  • Kim, Sang Gon;Lee, Jin-Seok;Bae, Hwan Hee;Kim, Jung-Tae;Son, Beom-Young;Baek, Seong-Bum
    • Journal of The Korean Society of Grassland and Forage Science
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    • v.37 no.2
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    • pp.168-175
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    • 2017
  • Single nucleotide polymorphisms (SNP) markers allow rapid screening of crop varieties in early growth stages. We developed a modified SNP PCR procedure for assaying SNPs in maize. For SNP marker development, we chosen 200 SNP sites from MaizeGDB database, and designed two base pair mismatch primers based on putative SNP site of B73 genome sequence. PCR products size was from 200 to 500 bp or was not shown in the case of SNP site existing in Korean silage corns. Using previously discovered 16 primer sets, we investigated distinctness of 50 silage F1 hybrid corns including 10 Korean silage corns developed by RDA such as Gangdaok, Kwangpyeongok, Dapyeongok, Andaok, Yanganok, Singwangok, Jangdaok, Cheongdaok, Pyeonggangok, and Pyeonganok as well as 40 foreign commercial silage corns. From cluster analysis, we confirmed that 10 Korean silage F1 hybrid corns were clearly distinguished except for Singwangok, P1395, and several foreign commercial corns, and selected minimum SNP primer combination for Gangdaok, Jangdaok, Pyeonggangok, and Pyeonganok. Therefore, development of SNP marker sets might be faster, cheaper, and feasible breed discrimination method through simple PCR and agarose gel electrophoresis.

Discrimination and Hordein Polypeptide Patterns of Malting Barley Varieties Using UPLC (UPLC 분석을 이용한 맥주보리 품종의 호데인 단백질 분석 및 품종 판별)

  • Yoon, Young-Mi;Kim, Yang-Kil;Kang, Chon-Sik;Park, Jin-Cheon;Park, Tae-Il
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.66 no.4
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    • pp.326-338
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    • 2021
  • Ultra-performance liquid chromatography (UPLC) was used to assess the hordein protein fraction of malting barley. C-hordeins (barley prolamins) were extracted with 70% ethanol (EtOH) and 55% isopropyl alcohol (IPA, 2-propanol), and B-hordeins were extracted with the same alcohols in 1.0% dithiothreitol (DTT). High molecular weight (HMW) prolamins (D-hordeins) were extracted with 50% IPA with 1M Tris-HCl (pH 8.0). The same protein patterns were observed in both the experimental extraction solutions (EtOH and IPA). However, the patterns of hordein, extracted with EtOH and IPA containing 1.0% DTT, differed slightly. C- and B-hordeins extracted from those solutions were analyzed. Twenty-six malting barley varieties developed in Korea were analyzed using UPLC. The varieties were divided into seven groups according to hordein patterns of retention time 16 min to 18 min, and 20 varieties showed unique patterns.

Fake Iris Image Detection based on Watermark

  • Kim, Man-Ki;Lee, Samuel;Kim, Gye-Young
    • Journal of the Korea Society of Computer and Information
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    • v.23 no.4
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    • pp.33-39
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    • 2018
  • In this paper, we propose a describes how to detect a false iris image by inserting watermark into a iris image. The existing method, which inserts the watermark into the entire iris image to detect a fake iris, has a problem that can evade it by segmenting iris region of an iris image. The purpose of overcoming the problem, this paper proposes a new fake iris detection technique based on digital watermark. It first searches a central point of an iris image, divide the image into blocks with respect to the point. executes Discrete Cosine Transform, inserts watermark into the blocks, and then verifies an iris image using NC(Normalized Correlation). In the experiments, we confirm the robustness for attacks - crop and JPEG.

Interactions among Carbon Isotope Discrimination, Water Use Efficiency and Nitrogen Nutrition in Wheat and Barley (밀과 보리에 있어서 탄소동위원소차별, 수분이용효율, 질소영양간의 상호작용)

  • Young Kil, Kang;Richard A., Richards;Anthony G., Condon
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.41 no.3
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    • pp.318-331
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    • 1996
  • Large and small seeds (44 and 22 mg per caryopsis) of a spring wheat (cv. Kulin) and a spring barley (cv. Skiff) were sown at two nitrogen rates (equivalent to 10 and 32 g m$^{-2}$ ) in well-watered pots under outdoor conditions to determine the effects of seed size and nitrogen (N) nutrition on water use efficiency (WUE) and carbon isotope discrimination ($\Delta$) and to evaluate interaction among $\Delta$, WUE and N nutrition in wheat and barley. Barley produced, on average, 105% more biomass (root+shoot dry weight) than wheat at stem elongation because of early vigor. By anthesis this difference had disappeared as wheat had 16% more biomass than barley which headed 3 days earlier. Compared to plants grown from small seed, plants grown from large seed had much greater biomass in wheat than in barley at stem elongation and anthesis. Higher N nutrition increased average biomass of wheat and barley by 40 and 31%, respectively, at anthesis. Barley had 35 and 20% greater WUE (biomass gained/transpiration) than wheat at stem elongation and anthesis, respectively, and 2.0 to 3.6% lower $\Delta$ in aboveground shoots depending on growth stages and plant parts than wheat which had a greater stomatal conductance than barley. Seed size had a variable effect on WUE and did not affected $\Delta$ values. Water use efficiency was not affected by N rate at stem elongation in wheat and barley whereas WUE was increased 2 and 7%, respectively, in wheat and barley at anthesis with increasing N from 10 to 32 g m$^{-2}$ . High N plants had about 2.5% lower $\Delta$ values regardless of growth stages than low N plants across species and seed sizes. Carbon isotope discrimination was negatively correlated with WUE at anthesis but not at stem elongation.

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