• Title/Summary/Keyword: compositional data

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Current status of comparative compositional analysis for GM crop biosafety assessment (유전자변형작물 안전성평가를 위한 영양성분 비교연구 동향)

  • Kim, Eun-Ha;Oh, Seon-Woo;Lee, Sang-Gu;Lee, Sung-Kon;Ryu, Tae-Hun
    • Journal of Plant Biotechnology
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    • v.47 no.4
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    • pp.261-272
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    • 2020
  • Approvals for cultivation and import of genetically modified (GM) crops have dramatically increased around the world. Comparative compositional studies are an important aspect of safety assessments of products from GM crops and are based on substantial equivalence. Compositional analyses focus on determining similarities and differences between the compositions of the GM crops and their conventional counterparts, and thereby assessing the compositional equivalence of GM crops and their conventional comparators. The analytes, such as major constituents, key nutrients, and antinutrients, are generally determined on a crop-specific basis according to the OECD consensus document. The use of standard methods throughout the processes, such as selection of comparators, field trials, analytical methods, and statistical data analysis, is crucial. In this study, we showed the general framework of compositional studies. Literature for compositional studies of GM crops conducted abroad and in Korea was reviewed to obtain information about analytes, conventional counterparts, cultivation year, location, and statistical methods. The studies conducted abroad assessed for commercial release of GM crops such as soybean, maize, and cotton, while domestic studies were mainly performed for research in rice. In addition, we suggested a guidance for conventional comparators and field trials applicable to the domestic situation.

Regional Contextual Factors and Self-Rated Health: a Multilevel Study of Korean Adults

  • Lee Sang Gyu
    • Korean Journal of Health Education and Promotion
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    • v.21 no.4
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    • pp.75-97
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    • 2004
  • Objectives: To examine whether the socioeconomic characteristics of communities (contextual effects) are related to the self-rated health of community residents after controlling individual characteristics (compositional effects). Methods: A linked data set including information on individuals from raw data of 1998 Korean National Health and Nutrition Survey(KNHNS) and information on the regions where the individuals lived from the socioeconomic statistical indices of Si-Gun-Gu (city-county-ward) in 1998 was established. The contextual factors of communities were generated from these socioeconomic indices through factor analysis. The contextual effects of community over and above the individual characteristics on the self-rated health were investigated using multilevel analysis. Results: The contextual factors of the community expressed as the factor scores have influence on the self-rated health of their residents above the compositional factors. When the communities were categorized into 5 groups (highest, high, middle, low, lowest) according to each of their factor scores, for factor 1 reflecting urbanization reversely, the residents of the communities that had the high, middle, and low factor scores showed significantly poor subjective health status than the residents of the lowest (most urbanized) group. For factor 2 reflecting community services and health resources, the subjective health status of the residents gradually became poorer when the group went from the highest to the lowest, and the low and lowest groups showed a significant difference. For factor 3 reflecting the manufacturing industry, as compared with the communities that have the highest factor scores, the other 4 groups showed significantly poorer subjective health status. And for factor 4 reflecting the scale of the regional government, as compared with the middle group, the rest of the 4 groups showed significantly better self-rated health. Conclusions: There existed regional contextual effects on their residents' health in Korean adults. To make policies tackling these contextual effects possible, more elaborate researches to find more specific factors and to explain the mechanisms of how health is influenced by the contextual factors are needed.

Multilevel analysis and regional variation of physical activities in Korean adults based on the 4th Korea National Health and Nutrition Examination Survey

  • Jang, Min-Young;Lee, Moo-Sik;Hong, Jee-Young;Kim, Hyunsoo;Kim, Kwang-Hwan;Bae, Seok-Hwan
    • Korean Journal of Health Education and Promotion
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    • v.33 no.3
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    • pp.95-107
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    • 2016
  • Objectives: Physical activity is well known as one of the most effective health behaviors for maintaining and promoting health. The purpose of this study was to investigate the regional variation, compositional and contextual factors on physical activities in Korea. Methods: This study analyzed data of 6,353 adults in 4th-1, 2 Korea National Health and Nutrition Examination Survey (KNHANES). Independent variables were compositional factors that included general characteristics, health behaviors, health status, and contextual factors that included physical environment, political environment, and social safety net. Dependent variables were vigorous physical activity, moderate physical activity, and walking activity. Multilevel analysis were used to determine a variation of physical activity between levels of compositional factors and contextual factors. Results: Physical activities of the Korean people were affected by the regional variables. Financial independence and population density were related with moderate physical activity significantly. Population density, school sport or rally spaces, cultural facilities, and social safety concerns were related with walking activity significantly. These variables impacted on physical activities along with variables at the individual level. Variance Partition Coefficient were 9.94% at moderate physical activity and 2.91% at walking activities, respectively. Conclusions: The results suggest that the regional variables should be considered when planning public intervention to promoting physical activities in Korean adults.

Development of a Simplified Version of SC-IQ in Korea (SC-IQ의 간이 측정방법 개발)

  • Kim, Eun-Mi;Bae, Sang-Soo
    • Korean Journal of Health Education and Promotion
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    • v.29 no.1
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    • pp.73-87
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    • 2012
  • Objectives: The purpose of this study was to examine the compositional fitness and independence of the original six dimensions and the newly-designed six dimensions of Integrated Questionnaire for the Measurement of Social Capital[SC-IQ], and to explore the more simplified version for convenient use in public health-related social capital studies. Methods: This study reanalyzed social capital items included in a 2004 community health survey of K-city conducted by Hallym Health Services Research Center. Data was collected from 1,000 adults using core questions of SC-IQ. Explanatory factor analyses to all questions were done, and the new six dimensions were established. Confirmatory factor analyses[CFA] were done on the original and new six dimensions. And then reliability and validity test were done. SPSS 15.0 and AMOS 7.0 were used. Results: The final CFA module to the new SC-IQ exhibited Root Mean Square Error of Approximation[RMSEA] 0.028 and only compositional fitness and independence, and was composed of four dimensions and eight questions, and covers all elements of social capital including structural, cognitive, operational, outcome, bonding and bridging elements. Conclusion: This study demonstrates the utility of a new, simplified version of SC-IQ as well as its convenience.

Spatializing beta-diversity of vascular plants - Application of Generalized Dissimilarity Model in the Republic of Korea - (식생 베타 다양성의 공간화 기법 연구 - Generalized Dissimilarity Model의 국내적용 및 활용 -)

  • Choi, Yu-Young
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.25 no.3
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    • pp.29-45
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    • 2022
  • For biodiversity conservation, the importance of beta-diversity which is changes in the composition of species according to environmental changes has become emphasized. However, given the systematic investigation of species distribution and the accumulation of large amounts of data in the Republic of Korea(ROK), research on the spatialization of beta-diversity using them is insufficient. Accordingly, this research investigated the applicability of the Generalized Dissimilarity Modeling(GDM) to ROK, which can predict and map the similarity of compositional turnover (beta-diversity) based on environmental variables. A brief overview of the statistical description on using GDM was presented, and a model was fitted using the flora distribution data(410,621points) from the National Ecosystem Survey and various environmental spatial data including climate, soil, topography, and land cover. Procedures and appropriated spatial units required to improve the explanatory power of the model were presented. As a result, it was found that geographical distance, temperature annual range, summer temperature, winter precipitation, and soil factors affect the dissimilarity of the vegetation community composition. In addition, as a result of predicting the similarity of vegetation composition across the nation, and classifying them into 20 and 100 zones, the similarity was high mainly in the central inland area, and tends to decrease toward the mountainous areas, southern coastal regions, and island including Jeju island, which means the composition of the vegetation community is unique and beta diversity is high. In addition, it was identified that the number of common species between zones decreased as the geographic distance between zones increased. It classified the spatial distribution of plant community composition in a quantitative and objective way, but additional research and verification are needed for practical application. It is expected that research on community-level biodiversity modeling in the ROK will be conducted more actively based on this study.

Nonparametric compositional data analysis for tourism industry in Gangwon area (강원도 관광산업에 대한 비모수적 구성비 자료 분석)

  • Seongeun Park;Jeong Min Jeon;Young Kyung Lee
    • The Korean Journal of Applied Statistics
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    • v.36 no.5
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    • pp.473-488
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    • 2023
  • Gangwon-do is one of Korea's most popular tourist destinations, with varying tourism demands and trends across its subregions. It is crucial to identify the characteristics of tourism in each area and compare the tourism patterns over time to devise policies that revitalize tourism in each local government and promote balanced development across regions. In this paper, we classify the regions in Gangwon-do based on tourism data from the last four years and analyze the tourism pattern of each region using the non-Euclidean additive model proposed by Jeon et al. (2021). The model incorporates the proportions of visitors by age groups and the proportions of navigation searches by destination types as two covariates, and the proportions of tourism expenditure types as a response variable. We estimate the model using the smooth-backfitting method and coordinate-wise bandwidth selection. The results are visualized in ternary plots, and changes in tourism patterns over time are analyzed by comparing the ratios of prediction errors to fitting errors.

Magmatic evolution of igneous rocks related with the Samrangjin caldera, southeastern Korea (삼랑진 칼데라에 관련된 화성암류의 마그마 진화)

  • 황상구;정창식
    • The Journal of the Petrological Society of Korea
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    • v.7 no.3
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    • pp.161-176
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    • 1998
  • There are exposed Samrangjin Tuff and intracaldera intrusions, of which rhyolitic rocks emplaced as postcollapsed central and ring intrusions within the Samrangjin caldera, and fine-grained granodiorite and biotite granite as regional tectonic intrusions nearby. The Samrangjin Tuff and the rhyolitic rocks are of a single Samrangjin magmatic system. Flow-banded rhyolite among rhyolitic rocks was emplaced in the outer part of the ring intrusions, rhyodacite in the inner part of the eastern ring, and porphyritic dacite and dacite porphyry in the inner part of the northwestern ring. Totally the Samrangjin Tuff and the rhyolitic rocks range from rhyolite to dacite in chemical composition. The Rb-Sr isotopic data of the Samrangjin Tuff and the rhyolitic rocks yield an age of $80.8{\pm}1.5(2{\sigma})$ Ma with the initial $^{87}Sr/^{86}Sr$ ratio of $0.70521{\pm}0.00010(2{\sigma})$. The continuous compositional zonations generally define a large stratified magma system in the postcollapse magma chamber. The Sr isotopic data suggest that the compositional zonations might have resulted from the fractional crystallization of a parental dacitic magma.

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SIZE AND ALBEDO PROPERTIES OF MAIN BELT ASTEROIDS BASED ON THE COMPARATIVE STUDY OF INFRARED ASTEROID SURVEYS: IRAS, AKARI, AND WISE

  • Usui, Fumihiko;Hasegawa, Sunao;Ishiguro, Masateru;Muller, Thomas G.;Ootsubo, Takafumi
    • Publications of The Korean Astronomical Society
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    • v.32 no.1
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    • pp.55-57
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    • 2017
  • Presently, the number of known asteroids is more than 710,000. Knowledge of size and albedo is essential in many aspects of asteroid research, such as the chemical composition and mineralogy, the size-frequency distribution of dynamical families, and the relationship between small bodies in the outer solar system or comets. Recently, based on the infrared all-sky survey data obtained by IRAS, AKARI, and WISE, the large asteroid catalogs containing size and albedo data have been constructed. In this paper, we discuss the compositional distribution in the main belt regions based on the compiled data on size, albedo, and separately obtained taxonomic type information.

Principal component analysis for Hilbertian functional data

  • Kim, Dongwoo;Lee, Young Kyung;Park, Byeong U.
    • Communications for Statistical Applications and Methods
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    • v.27 no.1
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    • pp.149-161
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    • 2020
  • In this paper we extend the functional principal component analysis for real-valued random functions to the case of Hilbert-space-valued functional random objects. For this, we introduce an autocovariance operator acting on the space of real-valued functions. We establish an eigendecomposition of the autocovariance operator and a Karuhnen-Loève expansion. We propose the estimators of the eigenfunctions and the functional principal component scores, and investigate the rates of convergence of the estimators to their targets. We detail the implementation of the methodology for the cases of compositional vectors and density functions, and illustrate the method by analyzing time-varying population composition data. We also discuss an extension of the methodology to multivariate cases and develop the corresponding theory.

Development of the conventional crop composition database for new genetically engineered crop safety assessment (새로운 생명공학작물 안전성 평가를 위한 작물 성분 DB 구축)

  • Kim, Eun-Ha;Lee, Seong-Kon;Park, Soo-Yun;Lee, Sang-Gu;Oh, Seon-Woo
    • Journal of Plant Biotechnology
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    • v.45 no.4
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    • pp.289-298
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    • 2018
  • The Biosafety Division of the National Academy of Agricultural Science has developed a 'Crop Composition DB' that provides analytical data on commercialized crops. It can be used as a reference in the 'Comparative Evaluation by Compositional Analysis' for the safety assessment of genetically modified (GM) crops. This database provides the composition of crops cultivated in Korea, and thus upgrades the data to check the extent of changes in the compositional content depending on the cultivated area, varieties and year. The database is a compilation of data on the antioxidant, nutrient and secondary metabolite compositions of rice and capsicum grown in two or more cultivation areas for a period of more than two years. Data analysis was conducted under the guidelines of the Association of Official Analytical Chemists or methods previously reported on papers. The data was provided as average, minimum and maximum values to assess whether the statistical differences between the GM crops and comparative non-GM crops fall within the biological differences or tolerances of the existing commercial crops. The Crop Composition DB is an open-access source and is easy to access based on the query selected by the user. Moreover, functional ingredients of colored crops, such as potatoes, sweet potatoes and cauliflowers, were provided so that food information can be used and utilized by general consumers. This paper introduces the feature and usage of 'Crop Composition DB', which is a valuable tool for characterizing the composition of conventional crops.