• Title/Summary/Keyword: cluster mapping

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A Hashing Method Using PCA-based Clustering (PCA 기반 군집화를 이용한 해슁 기법)

  • Park, Cheong Hee
    • KIPS Transactions on Software and Data Engineering
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    • v.3 no.6
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    • pp.215-218
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    • 2014
  • In hashing-based methods for approximate nearest neighbors(ANN) search, by mapping data points to k-bit binary codes, nearest neighbors are searched in a binary embedding space. In this paper, we present a hashing method using a PCA-based clustering method, Principal Direction Divisive Partitioning(PDDP). PDDP is a clustering method which repeatedly partitions the cluster with the largest variance into two clusters by using the first principal direction. The proposed hashing method utilizes the first principal direction as a projective direction for binary coding. Experimental results demonstrate that the proposed method is competitive compared with other hashing methods.

THE LAND COVER MAPPING IN NORTH KOREA USING MODIS IMAGE;THE CLASSIFICATION ACCURACY ENHANCEMENT FOR INACCESSIBLE AREA USING GOOGLE EARTH

  • Cha, Su-Young;Park, Chong-Hwa
    • Proceedings of the KSRS Conference
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    • 2007.10a
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    • pp.341-344
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    • 2007
  • A major obstacle to classify and validate Land Cover maps is the high cost of generating reference data or multiple thematic maps for subsequent comparative analysis. In case of inaccessible area such as North Korea, the high resolution satellite imagery may be used as in situ data so as to overcome the lack of reliable reference data. The objective of this paper is to investigate the possibility of utilizing QuickBird (0.6m) of North Korea obtained from Google Earth data provided thru internet. Monthly NDVI images of nine months from the summer of 2004 were classified into L=54 cluster using ISODATA algorithm, and these L clusters were assigned to 7 classes; coniferous forest, deciduous forest, mixed forest, paddy field, dry field, water and built-up area. The overall accuracy and Kappa index were 85.98% and 0.82, respectively, which represents about 10% point increase of classification accuracy than our previous study based on GCP point data around North Korea. Thus we can conclude that Google Earth may be used to substitute the traditional in situ data collection on the site where the accessibility is severely limited.

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Sonar Map Construction for Autonomous Mobile Robots Using Data Association Filter (데이터 연관 필터를 이용한 자율이동로봇의 초음파지도 작성)

  • Lee Yu-Chul;Lim Jong-Hwan;Cho Dong-Woo
    • The Transactions of the Korean Institute of Electrical Engineers D
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    • v.54 no.9
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    • pp.539-546
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    • 2005
  • This paper describes a method of building the probability grid map for an autonomous mobile robot using the ultrasonic DAF(data association filter). The DAF, which evaluates the association of each data with the rest and removes the data affected by the specular reflection effect, can improve the reliability of the data for the Probability grid map. This method is based on the evaluation of possibility that the acquired data are all from the same object. Namely, the data from specular reflection have very few possibilities of detecting the same object, so that they are excluded from the data cluster during the process of the DAF. Therefore, the uncertain data corrupted by the specular reflection and/or multi-path effect, are not used to update the probability map, and hence building a good quality of a grid map is possible even in a specular environment. In order to verify the effectiveness of the DAF, it was applied to the Bayesian model and the orientation probability model which are the typical ones of a grid map. We demonstrate the experimental results using a real mobile robot in the real world.

A Study on Labeling of ECG Signal using Fuzzy Clustering (퍼지 클러스터링을 이용한 심전도 신호의 라벨링에 관한 연구)

  • Kong, I.W.;Lee, J.W.;Lee, S.H.;Choi, S.J.;Lee, M.H.
    • Proceedings of the KOSOMBE Conference
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    • v.1996 no.11
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    • pp.118-121
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    • 1996
  • This paper describes ECG signal labeling based on Fuzzy clustering, which is necessary at automated ECG diagnosis. The NPPA(Non parametric partitioning algorithm) compares the correlations of wave forms, which tends to recognize the same wave forms as different when the wave forms have a little morphological variation. We propose to apply Fuzzy clustering to ECG QRS Complex labeling, which prevents the errors to mistake by using If-then comparision. The process is divided into two parts. The first part is a parameters extraction process from ECG signal, which is composed of filtering, QRS detection by mapping to a phase space by time delay coordinates and generation of characteristic vectors. The second is fuzzy clustering by FCM(Fuzzy c-means), which is composed of a clustering, an assessment of cluster validity and labeling.

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Monitoring of Graveyards in Mountainous Areas with Simulated KOMPSAT-2 imagery

  • Chang, Eun-Mi;Kim, Min-Ho;Lee, Byung-Whan;Heo, Min
    • Proceedings of the KSRS Conference
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    • 2003.11a
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    • pp.1409-1411
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    • 2003
  • The application of simulated KOMPSAT-2 imagery to monitor graveyards is to be developed. Positions calculated from image were compared with those obtained from Geographic Positioning System. With 24 checkpoints, the position of graveyards showed within 5-meter range. Unsupervised classification, supervised classification, and objected-orientation classification algorithms were used to extract the graveyard. Unsupervised classification with masking processes based on National topographic data gives the best result. The graveyards were categorized with four types in field studies while the two types of graveyards were shown in descriptive statistics. Cluster Analysis and discriminant analysis showed the consistency with two types of tombs. It was hard to get a specific spectral signature of graveyards, as they are covered with grasses at different levels and shaded from the surrounding trees. The slopes and aspects of location of graveyards did not make any difference in the spectral signatures. This study gives the basic spectral characteristics for further development of objected-oriented classification algorithms and plausibility of KOMPSAT-2 images for management of mountainous areas in the aspect of position accuracy and classification accuracy.

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Resistance to Turnip Mosaic Virus in the Family Brassicaceae

  • Palukaitis, Peter;Kim, Su
    • The Plant Pathology Journal
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    • v.37 no.1
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    • pp.1-23
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    • 2021
  • Resistance to diseases caused by turnip mosaic virus (TuMV) in crop species of the family Brassicaceae has been studied extensively, especially in members of the genus Brassica. The variation in response observed on resistant and susceptible plants inoculated with different isolates of TuMV is due to a combination of the variation in the plant resistome and the variation in the virus genome. Here, we review the breadth of this variation, both at the level of variation in TuMV sequences, with one eye towards the phylogeny and evolution of the virus, and another eye towards the nature of the various responses observed in susceptible vs. different types of resistance responses. The analyses of the viral genomes allowed comparisons of pathotyped viruses on particular indicator hosts to produce clusters of host types, while the inclusion of phylogeny data and geographic location allowed the formation of the host/geographic cluster groups, the derivation of both of which are presented here. Various studies on resistance determination in particular brassica crops sometimes led to further genetic studies, in many cases to include the mapping of genes, and in some cases to the actual identification of the genes. In addition to summarizing the results from such studies done in brassica crops, as well as in radish and Arabidopsis (the latter as a potential source of candidate genes for brassica and radish), we also summarize work done using nonconventional approaches to obtaining resistance to TuMV.

Comprehensive Transcriptomic Analysis of Cordyceps militaris Cultivated on Germinated Soybeans

  • Yoo, Chang-Hyuk;Sadat, Md. Abu;Kim, Wonjae;Park, Tae-Sik;Park, Dong Ki;Choi, Jaehyuk
    • Mycobiology
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    • v.50 no.1
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    • pp.1-11
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    • 2022
  • The ascomycete fungus Cordyceps militaris infects lepidopteran larvae and pupae and forms characteristic fruiting bodies. Owing to its immune-enhancing effects, the fungus has been used as a medicine. For industrial application, this fungus can be grown on geminated soybeans as an alternative protein source. In our study, we performed a comprehensive transcriptomic analysis to identify core gene sets during C. militaris cultivation on germinated soybeans. RNA-Seq technology was applied to the fungal cultures at seven-time points (2, 4, and 7-day and 2, 3, 5, 7-week old cultures) to investigate the global transcriptomic change. We conducted a time-series analysis using a two-step regression strategy and chose 1460 significant genes and assigned them into five clusters. Characterization of each cluster based on Gene Ontology and Kyoto Encyclopedia of Genes and Genomes databases revealed that transcription profiles changed after two weeks of incubation. Gene mapping of cordycepin biosynthesis and isoflavone modification pathways also confirmed that gene expression in the early stage of GSC cultivation is important for these metabolic pathways. Our transcriptomic analysis and selected genes provided a comprehensive molecular basis for the cultivation of C. militaris on germinated soybeans.

Characteristic Chemical Correlations in Nearby Star-forming Molecular Clouds

  • Yun, Hyeong-Sik;Lee, Jeong-Eun;Evans, Neal J. II;Offner, Stella;Heyer, Mark H.;Choi, Yunhee;Lee, Yong-Hee;Baek, Giseon;Choi, Minho;Kang, Hyunwoo;Tatematsu, Ken'ichi;Lee, Seokho;Yang, Yao-Lun;Gaches, Brandt;Chen, How-Huan
    • The Bulletin of The Korean Astronomical Society
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    • v.45 no.1
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    • pp.41.1-41.1
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    • 2020
  • Different molecular lines trace different physical environments (with various densities and temperatures) within molecular clouds (MCs). Therefore, multimolecular line observations are crucial to study the physical and chemical structures of MCs. We observed the Orion A and Ophiuchus clouds in six different molecular lines as a Taeduk Radio Astronomy Observatory Key Science Program (TRAO-KSP), "mapping Turbulent properties In star-forming MolEcular clouds down to the Sonic scale" (TIMES; PI: Jeong-Eun Lee). Here, we investigate the characteristic relations between the observed lines by performing the Principal Component Analysis (PCA). We also investigate the correlation between the line intensity distributions and the physical parameters, such as the gas column density and dust temperature. Finally, we will discuss how the correlations among different chemical tracers vary with the star formation environments.

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Analysis of $^{99m}Tc-ECD$ Brain SPECT Images for ADHD in Children Using Statistical Parametric Mapping (SPM) (주의력 결핍 과잉행동장애(ADHD) 어린이 $^{99m}Tc-ECD$ Brain SPECT Image의 SPM을 이용한 분석)

  • 박성옥;신동호;권수일;이명훈;조철우;윤석남;오은영
    • Progress in Medical Physics
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    • v.14 no.2
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    • pp.141-148
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    • 2003
  • The purpose of this study is to evaluate the distribution of clusters and blood flow rate in ADHD SPECT brain blood flow images of children using statistical parametric mapping (SPM99). We studied 64 ADHD children (4-15 y, $8.03{\pm}2.57$ y. male/female:52/12) and compared them with a control group of 12 children (6-l7 y, $9.42{\pm}3.37$ y, male/female:8/4). We injected blood flow tracer $^{99m}Tc$-ethylcysteinate dimer (ECD) as a rCBF agent and took blood flow images after 30 min. by SPECT camera. In the case of hyperperfusion of rCBF in the ADHD group, we found 3 clusters clearly separated at the cingulate gyrus, Rt.cerebral occipital lobe and Lt.cerebellar post. lobe, on probability level 0.05 (P<0.05). Thirty-six ADHD patients with average hyperfusion rates between 18.72-19.30% in each cluster had more increase in blood flow than the average perfusion rate at the Rt. cerebral occipital lobe. These levels were influenced by P-value. In the case of hypoperfusion in the ADHD children, 4 decreased clusters on Lt. and Rt. cerebral frontal lobe, Lt. cerebral claustrum and Rt. cerebral, sup. temporal gyrus at P<0.01 can be seen. The average hypoperfusion rates for the ADHD children were 18.41-18.69% in each cluster, which showed more hypopefusion than the average perfusion rate at the Lt. Cerebrum inf. Frontal gyrus. The perfusion rates and the number of patients were not affected by P-value. The result of this study shows significant hyperpefusion clusters at the probability level of P:0.05 and hypoperfusion clusters at P:0.01. The number of ADHD patients in each clusters and the perfusion rate were not affected by P-value.

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Term Mapping Methodology between Everyday Words and Legal Terms for Law Information Search System (법령정보 검색을 위한 생활용어와 법률용어 간의 대응관계 탐색 방법론)

  • Kim, Ji Hyun;Lee, Jong-Seo;Lee, Myungjin;Kim, Wooju;Hong, June Seok
    • Journal of Intelligence and Information Systems
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    • v.18 no.3
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    • pp.137-152
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    • 2012
  • In the generation of Web 2.0, as many users start to make lots of web contents called user created contents by themselves, the World Wide Web is overflowing by countless information. Therefore, it becomes the key to find out meaningful information among lots of resources. Nowadays, the information retrieval is the most important thing throughout the whole field and several types of search services are developed and widely used in various fields to retrieve information that user really wants. Especially, the legal information search is one of the indispensable services in order to provide people with their convenience through searching the law necessary to their present situation as a channel getting knowledge about it. The Office of Legislation in Korea provides the Korean Law Information portal service to search the law information such as legislation, administrative rule, and judicial precedent from 2009, so people can conveniently find information related to the law. However, this service has limitation because the recent technology for search engine basically returns documents depending on whether the query is included in it or not as a search result. Therefore, it is really difficult to retrieve information related the law for general users who are not familiar with legal terms in the search engine using simple matching of keywords in spite of those kinds of efforts of the Office of Legislation in Korea, because there is a huge divergence between everyday words and legal terms which are especially from Chinese words. Generally, people try to access the law information using everyday words, so they have a difficulty to get the result that they exactly want. In this paper, we propose a term mapping methodology between everyday words and legal terms for general users who don't have sufficient background about legal terms, and we develop a search service that can provide the search results of law information from everyday words. This will be able to search the law information accurately without the knowledge of legal terminology. In other words, our research goal is to make a law information search system that general users are able to retrieval the law information with everyday words. First, this paper takes advantage of tags of internet blogs using the concept for collective intelligence to find out the term mapping relationship between everyday words and legal terms. In order to achieve our goal, we collect tags related to an everyday word from web blog posts. Generally, people add a non-hierarchical keyword or term like a synonym, especially called tag, in order to describe, classify, and manage their posts when they make any post in the internet blog. Second, the collected tags are clustered through the cluster analysis method, K-means. Then, we find a mapping relationship between an everyday word and a legal term using our estimation measure to select the fittest one that can match with an everyday word. Selected legal terms are given the definite relationship, and the relations between everyday words and legal terms are described using SKOS that is an ontology to describe the knowledge related to thesauri, classification schemes, taxonomies, and subject-heading. Thus, based on proposed mapping and searching methodologies, our legal information search system finds out a legal term mapped with user query and retrieves law information using a matched legal term, if users try to retrieve law information using an everyday word. Therefore, from our research, users can get exact results even if they do not have the knowledge related to legal terms. As a result of our research, we expect that general users who don't have professional legal background can conveniently and efficiently retrieve the legal information using everyday words.