• 제목/요약/키워드: biomedical data classification

검색결과 129건 처리시간 0.024초

Comparison of Classification Rules Regarding SaMD Between the Regulation EU 2017/745 and the Directive 93/42/EEC

  • Ryu, Gyuha;Lee, Jiyoon
    • 대한의용생체공학회:의공학회지
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    • 제42권6호
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    • pp.277-286
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    • 2021
  • The global market size of AI based SaMD for medical image in 2023 will be anticipated to reach around 620 billion won (518 million dollars). In order for Korean manufacturers to efficiently obtain CE marking for marketing in the EU countries, the paper is to introduce the recommendation and suggestion of how to reclassify SaMD based on classification rules of MDR because, after introducing the Regulation EU 2017/745, classification rules are quite modified and newly added compared to the Directive 93/42/EEC. In addition, the paper is to provide several rules of MDR that may be applicable to decide the classification of SaMD. Lastly, the paper is to examine and demonstrate various secondary data supported by qualitative data because the paper focuses on the suggestion and recommendation with a public trust on the basis of various secondary data conducted by the analysis of field data. In conclusion, the paper found that the previous classification of SaMD followed by the rule of MDD should be reclassified based on the Regulation EU 2017/745. Therefore, the suggestion and recommendation are useful for Korean manufacturers to comprehend the classification of SaMD for marketing in the EU countries.

Genetic Variations of Aspergillus fumigatus Clinical Isolates from Korea

  • Kim, Sunghyun;Ma, Pan-Gon;Park, Young-Seok;Yu, Young-Bin;Hwang, Kyu Jam;Kim, Young Kwon
    • 대한의생명과학회지
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    • 제23권3호
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    • pp.223-229
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    • 2017
  • Fungal infections by human pathogenic fungi are increasing globally in elderly, children and immune suppressed or deficient patients. Aspergillus fumigatus is one of the well-known pathogenic fungi and causes aspergilloses in human world widely. However, current identification and classification methods based on its phenotypic characteristics still have limitations. Therefore, currently, molecular biological tools using their DNA sequences are used for genotype identification and classification. In the present study, in order to analyze genetic variations of A. fumigatus clinical isolates, a total of six housekeeping genes were amplified by PCR using specific primer pairs and multi-locus sequence typing (MLST) assay. Results from phylogenetic tree analysis showed that most A. fumigatus strains (88.9%) from respiratory specimens were classified into cluster A and B, and approximately half of A. fumigatus strains (46%) from non-respiratory specimens were classified into cluster C and D. Although the sample size was limited, genetic characteristics of A. fumigatus clinical isolates according to their origins were very similar and well-correlated with other clinical data.

알약 자동 인식을 위한 딥러닝 모델간 비교 및 검증 (Comparison and Verification of Deep Learning Models for Automatic Recognition of Pills)

  • 이경윤;김영재;김승태;김효은;김광기
    • 한국멀티미디어학회논문지
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    • 제22권3호
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    • pp.349-356
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    • 2019
  • When a prescription change occurs in the hospital depending on a patient's improvement status, pharmacists directly classify manually returned pills which are not taken by a patient. There are hundreds of kinds of pills to classify. Because it is manual, mistakes can occur and which can lead to medical accidents. In this study, we have compared YOLO, Faster R-CNN and RetinaNet to classify and detect pills. The data consisted of 10 classes and used 100 images per class. To evaluate the performance of each model, we used cross-validation. As a result, the YOLO Model had sensitivity of 91.05%, FPs/image of 0.0507. The Faster R-CNN's sensitivity was 99.6% and FPs/image was 0.0089. The RetinaNet showed sensitivity of 98.31% and FPs/image of 0.0119. Faster RCNN showed the best performance among these three models tested. Thus, the most appropriate model for classifying pills among the three models is the Faster R-CNN with the most accurate detection and classification results and a low FP/image.

3차원 MR 영상으로부터의 한국인 뇌조직확률지도 개발 (Development of Korean Tissue Probability Map from 3D Magnetic Resonance Images)

  • Jung Hyun, Kim;Jong-Min, Lee;Uicheul, Yoon;Hyun-Pil, Kim;Bang Bon, Koo;In Young, Kim;Dong Soo, Lee;Jun Soo, Kwon;Sun I., Kim
    • 대한의용생체공학회:의공학회지
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    • 제25권5호
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    • pp.323-328
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    • 2004
  • 대뇌조직 구분을 위한 실험적인 정보를 제공하기 위한 뇌조직 확률 지도를 개발하는 경우 개인마다 구조적으로 다양한 형태를 가진 뇌의 특성과 특히 인종간의 두드러진 차이론 반드시 고려해야 한다 본 연구에서는 특정 그룹에 대한 뇌조직 확률 지도를 제작하는데 필요한 절차를 알아보고 나이에 따른 그룹간의 뇌조직 확률 지도의 구조적인 차이를 살펴보고자 한다 피험자 그룹은 100명의 건강한 한국인이며 나이에 따라 두 그룹으로 분류하였다. 뇌 확률 지도의 기준 좌표계를 설정하기 위해 전체 그룹 내의 모든 피험자의 뇌 영상에 대한 평균 영상을 구하고, 각 뇌 영상을 기준 좌표계로 정규화 시킨다. 정규화 과정에서 얻어진 변환 매개 변수를 미리 각 뇌조직(회질, 백질, 뇌척수액)으로 분할된 피험자의 영상에 적용하고 각 그룹 내에서 변환된 뇌 조직 영상을 평균함으로써 뇌 조직 확률 지도를 완성하였다. 나이에 따른 구조적인 차이를 살펴보기 위해 그룹간 확률 값의 차이 영상을 구하였다. 이전 연구결과에서와 마찬가지로 나이가 증가함에 따라 뇌실이 확대되고 회질의 위축이 전체적인 뇌 영역에서 일어났다. 그러므로 우리는 대뇌 조직 분할을 위해 설험적인 정보들을 사용하고자 할 때는 특정 그룹에 대한 뇌 확률 지도를 사용할 것을 제안한다.

Support Vector Machine Based Arrhythmia Classification Using Reduced Features

  • Song, Mi-Hye;Lee, Jeon;Cho, Sung-Pil;Lee, Kyoung-Joung;Yoo, Sun-Kook
    • International Journal of Control, Automation, and Systems
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    • 제3권4호
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    • pp.571-579
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    • 2005
  • In this paper, we proposed an algorithm for arrhythmia classification, which is associated with the reduction of feature dimensions by linear discriminant analysis (LDA) and a support vector machine (SVM) based classifier. Seventeen original input features were extracted from preprocessed signals by wavelet transform, and attempts were then made to reduce these to 4 features, the linear combination of original features, by LDA. The performance of the SVM classifier with reduced features by LDA showed higher than with that by principal component analysis (PCA) and even with original features. For a cross-validation procedure, this SVM classifier was compared with Multilayer Perceptrons (MLP) and Fuzzy Inference System (FIS) classifiers. When all classifiers used the same reduced features, the overall performance of the SVM classifier was comprehensively superior to all others. Especially, the accuracy of discrimination of normal sinus rhythm (NSR), arterial premature contraction (APC), supraventricular tachycardia (SVT), premature ventricular contraction (PVC), ventricular tachycardia (VT) and ventricular fibrillation (VF) were $99.307\%,\;99.274\%,\;99.854\%,\;98.344\%,\;99.441\%\;and\;99.883\%$, respectively. And, even with smaller learning data, the SVM classifier offered better performance than the MLP classifier.

miRNA, PPI, 질병 정보를 이용한 마이크로어레이 데이터 통합 모델 설계 (Integrated Model Design of Microarray Data Using miRNA, PPI, Disease Information)

  • 하경식;임진묵;김홍기
    • 한국지능시스템학회논문지
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    • 제22권6호
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    • pp.786-792
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    • 2012
  • 마이크로어레이는 수만 가지 이상의 DNA 또는 RNA를 기판위에 배열해 놓은 것이며 이 기술을 이용하여 대량의 유전자 발현을 탐색할 수 있게 되었다. 그렇지만 마이크로어레이는 실험자가 탐색하려는 특정 표현형에 대해서 설계된 실험방법을 이용하므로 제한된 숫자의 유전자 발현만을 관찰할 수 있다. 본 논문에서는 MicroRNAs(miRNAs)와 Protein-Protein Interaction(PPI) 정보를 포함하고 있는 데이터베이스를 활용하여 마이크로어레이 데이터의 의미적 확장 방법을 제시하고자 한다. 또한 Online Mendelian Inheritance in Man(OMIM) 및 International Statistical Classification of Diseases and Related Health Problems, $10^{th}$ Revision(ICD-10)을 이용하여 질병 간 유전적 공통점 파악을 시도하였다. 이러한 접근방법을 통하여 새로운 생물학적 시각을 제공할 수 있을 것으로 기대된다.

근전도의 패턴분류와 근력 추정에 관한 연구 (A Study on the Pattern Classification of EMG and Muscle Force Estimation)

  • 권장우;장영건;정동명;홍승홍
    • 대한의용생체공학회:의공학회지
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    • 제13권1호
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    • pp.1-8
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    • 1992
  • In the field of prosthesis arm control, the pattern classification of the EMG signal is a required basis process and also the estimation of force from collected EMG data is another necessary duty. But unfortunately, what we've got is not real force but an EMG signal which contains the information of force. This is the reason why we estimate the force from the EMG data. In this paper, when we handle the EMG signal to estimate the force, spatial prewhitening process is applied from which the spatial correlation between the channels are removed. And after the orthogonal transformation which is used in the force estimation process, the transformed signal Is inputed into the probabilistic model for pattern classification. To verify the different results of the multiple channels, SNR(signal to noise ratio) function is introduced.

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자연어 처리 기반 『상한론(傷寒論)』 변병진단체계(辨病診斷體系) 분류를 위한 기계학습 모델 선정 (Selecting Machine Learning Model Based on Natural Language Processing for Shanghanlun Diagnostic System Classification)

  • 김영남
    • 대한상한금궤의학회지
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    • 제14권1호
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    • pp.41-50
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    • 2022
  • Objective : The purpose of this study is to explore the most suitable machine learning model algorithm for Shanghanlun diagnostic system classification using natural language processing (NLP). Methods : A total of 201 data items were collected from 『Shanghanlun』 and 『Clinical Shanghanlun』, 'Taeyangbyeong-gyeolhyung' and 'Eumyangyeokchahunobokbyeong' were excluded to prevent oversampling or undersampling. Data were pretreated using a twitter Korean tokenizer and trained by logistic regression, ridge regression, lasso regression, naive bayes classifier, decision tree, and random forest algorithms. The accuracy of the models were compared. Results : As a result of machine learning, ridge regression and naive Bayes classifier showed an accuracy of 0.843, logistic regression and random forest showed an accuracy of 0.804, and decision tree showed an accuracy of 0.745, while lasso regression showed an accuracy of 0.608. Conclusions : Ridge regression and naive Bayes classifier are suitable NLP machine learning models for the Shanghanlun diagnostic system classification.

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Classification of cardiotocograms using random forest classifier and selection of important features from cardiotocogram signal

  • Arif, Muhammad
    • Biomaterials and Biomechanics in Bioengineering
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    • 제2권3호
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    • pp.173-183
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    • 2015
  • In obstetrics, cardiotocography is a procedure to record the fetal heartbeat and the uterine contractions usually during the last trimester of pregnancy. It helps to monitor patterns associated with the fetal activity and to detect the pathologies. In this paper, random forest classifier is used to classify normal, suspicious and pathological patterns based on the features extracted from the cardiotocograms. The results showed that random forest classifier can detect these classes successfully with overall classification accuracy of 93.6%. Moreover, important features are identified to reduce the feature space. It is found that using seven important features, similar classification accuracy can be achieved by random forest classifier (93.3%).

CT영상에서의 AlexNet과 VggNet을 이용한 간암 병변 분류 연구 (Malignant and Benign Classification of Liver Tumor in CT according to Data pre-processing and Deep running model)

  • 최보혜;김영재;최승준;김광기
    • 대한의용생체공학회:의공학회지
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    • 제39권6호
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    • pp.229-236
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    • 2018
  • Liver cancer is one of the highest incidents in the world, and the mortality rate is the second most common disease after lung cancer. The purpose of this study is to evaluate the diagnostic ability of deep learning in the classification of malignant and benign tumors in CT images of patients with liver tumors. We also tried to identify the best data processing methods and deep learning models for classifying malignant and benign tumors in the liver. In this study, CT data were collected from 92 patients (benign liver tumors: 44, malignant liver tumors: 48) at the Gil Medical Center. The CT data of each patient were used for cross-sectional images of 3,024 liver tumors. In AlexNet and VggNet, the average of the overall accuracy at each image size was calculated: the average of the overall accuracy of the $200{\times}200$ image size is 69.58% (AlexNet), 69.4% (VggNet), $150{\times}150$ image size is 71.54%, 67%, $100{\times}100$ image size is 68.79%, 66.2%. In conclusion, the overall accuracy of each does not exceed 80%, so it does not have a high level of accuracy. In addition, the average accuracy in benign was 90.3% and the accuracy in malignant was 46.2%, which is a significant difference between benign and malignant. Also, the time it takes for AlexNet to learn is about 1.6 times faster than VggNet but statistically no different (p > 0.05). Since both models are less than 90% of the overall accuracy, more research and development are needed, such as learning the liver tumor data using a new model, or the process of pre-processing the data images in other methods. In the future, it will be useful to use specialists for image reading using deep learning.