• Title/Summary/Keyword: bio-systems

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BioCovi: A Visualization Service for Comparative Genomics Analysis

  • Lee, Jungsul;Park, Daeui;Bhak, Jong
    • Genomics & Informatics
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    • v.3 no.2
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    • pp.52-54
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    • 2005
  • Visualization of the homology information is an important method to analyze the evolutionary and functional meanings of genes. With a database containing model genomes of Homo sapiens, Mus muculus, and Rattus norvegicus, we constructed a web­based comparative analysis tool, BioCovi, to visualize the homology information of mammalian sequences on a very large scale. The user interface has several features: it marks regions whose identity is greater than that specified, it shows or hides gaps from the result of global sequence alignment, and it inverts the graph when total identity is higher than the threshold specified.

Development of a Precision Seeder for Direct Seeding of Rice on Dry Paddy (정밀 파종 벼 건답직파기 개발)

  • Yoo, S.N.;Kim, D.H.;Choi, Y.S.;Suh, S.R.
    • Journal of Biosystems Engineering
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    • v.33 no.2
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    • pp.83-93
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    • 2008
  • In order to save labor and cost, direct seeding has been considered as an important alternative to the machine transplanting in rice cultivation. Current direct seeding machines for rice in Korea drill irregularly under various operating conditions. This study was conducted to develope a precision seeder which enables the accurate, even-spaced in row placement of rice seeds at uniform depths of 3-4 cm on dry paddy. Design, construction and performance evaluation of the precision seeder were carried out. The tractor rear-mounted type 8-rows precision seeder which performs seeding in addition to fertilizing, ditching, and rotary tilling works on dry paddy was developed. Main components of the seeder were ditcher and leveller, rotary tiller, powered roller type furrow opener, seeding device, powered roller type furrow covering and firming device, hydraulic unit, seeding speed control system, power transmission system, hitch and frame. Ditching, furrow opening, and seed covering and firming performances were good and seeding depths of 2-4 cm could be maintained. Planting accuracies and planting precisions were within 13.6%, and 31.2%, respectively, for planting space of 15 cm, and seeding velocity of 0.5 m/s. These mean variations of average planting space were within 2.1 cm, and 90% of seeds in a hill were seeded within 4.7 cm of hill length, respectively. Error ratios between setting planting space and measured average planting space were shown within 6.7%. Therefore the seeder showed good planting performance up to seeding velocity of 0.5 m/s in field tests. And field capacity of the seeder was about 0.28 ha/hour.

A Study on the Basic Infra-Structure Disparities in Jeollanam-do Rural Areas - With Special Reference in Rural Roads, Public Water and Sewage Disposal Services - (전라남도 농촌지역의 생활환경시설 격차 분석 - 도로 및 상하수도 정비수준을 중심으로 -)

  • Yoon, Chi-Wook;Choi, Soo-Myung;Kim, Young-Taek;Park, Yong-Jin
    • Journal of Korean Society of Rural Planning
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    • v.18 no.2
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    • pp.69-79
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    • 2012
  • This study was carried out to analyze the disparities of basic living infrastructure between Guns(rural counties), and between Eups/Myuns(rural districts) in Jeollanam-do province. For the purpose of this study, dimensions of regional disparity in basic living structure were measured by 3 components ; road, public water service and sewage disposal. By utilizing the published statistics, this study has examined 8 Guns(counties) containing Eup and Myon in Jeollanam-do province which can represent 4 different rural areal types, respectively, i,e. mountainous, semi-mountainous, flat and seashore areas. The data acquisition time of this study is fixed on end of 2009 year in order for possible collections of the most recent published statistics. It presents evidence on the magnitude and evolution of discussion of regional disparities between Guns(counties), and between Eup & Myon, and between Myons in Jeollanam-do province even though infrastructure provision level of Jeollanam-do rural areas are much more improved than the past. Concludingly, the existing disparities in this area is meaningful and so, it should be seriously reconsidered when deciding local government's budget allocation priority.

Estimation of Representative Runoff Ratio from Paddy Field for the Application of EMC Method (EMC 방법적용을 위한 논 대표 유출률 산정)

  • Choi, Dongho;Jung, Jaewoon;Yoon, Kwangsik;Jin, Sohyun;Choi, Wooyoung;Choi, Woojung;Kim, Sangdon;Yim, Byungjin;Choi, Yujin
    • Journal of Korean Society on Water Environment
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    • v.26 no.6
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    • pp.943-947
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    • 2010
  • Runoff ratio of paddy fields for the application of Event Mean Concentration (EMC) method was studied. To measure actual runoff ratio of paddy fields, a field monitoring was conducted for 2008 ~ 2009 period. Long-term rainfall data of four cities in major river basins were analyzed and weighting factors were developed to consider temporal and spatial variation of rainfall distribution of Korean peninsula. The observed runoff ratio ranged 0.00 ~ 1.20 and arithmetic mean were 0.25, respectively. However, the representative runoff ratio for paddy fields was determined as 0.41 according to the method suggested by National Institute of Environmental Research (NIER).

Implantable Nerve Cuff Electrode with Conductive Polymer for Improving Recording Signal Quality at Peripheral Nerve (말초 신경 신호 기록의 효율성 개선을 위한 전도성 폴리머가 적용된 생체삽입형 커프형 신경전극)

  • Park, Sung Jin;Lee, Yi Jae;Yun, Kwang-Seok;Kang, Ji Yoon;Lee, Soo Hyun
    • Journal of Sensor Science and Technology
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    • v.24 no.1
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    • pp.22-28
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    • 2015
  • This study demonstrates a polyimide nerve cuff electrode with a conductive polymer for improving recording signal quality at peripheral nerve. The nerve cuff electrodes with platinum (Pt), iridium oxide (IrOx), and poly(3,4-ethylenedioxythiophene): p-toluene sulfonate (PEDOT:pTS) were fabricated and investigated their electrical characteristics for improving recorded nerve signal quality. The fabricated nerve cuff electrodes with Pt, IrOx, and PEDOT:pTS were characterized their impedance and CDC by using electrochemical impedance spectroscopy (EIS) and cyclic voltammetry. The impedance of PEDOT:pTS measured at 1 kHz was $257{\Omega}$, which was extremely lower than the value of the nerve cuff electrodes with IrOx ($15897{\Omega}$) and Pt ($952{\Omega}$), respectively. Furthermore, the charge delivery capacity (CDC) of the nerve cuff electrode with PEDOT:pTS was dramatically increased to 62 times than the nerve cuff electrode with IrOx. In ex-vivo test using extracted sciatic nerve of spaque-dawley rat (SD rat), the PEDOT:pTS group exhibited higher signal-to-interference ratio than IrOx group. These results indicated that the nerve cuff electrode with PEDOT:pTS is promising for effective implantable nerve signal recording.

A Economic Feasibility Study on Environmental Ecology Flow Supply Plan using Agricultural Reservoir - Focused on Dongbok River - (농업용저수지를 이용한 환경생태유량 확보방안 경제성 비교 연구 - 동복천을 중심으로 -)

  • Park, Jin-hyeon;Ko, Jae han;Sung, Mu-hong;Jung, Hyoung-mo;Park, Tae-sun;Kwak, Yeong Cheol;Choi, Woo-young;Boem, Jina;Jeung, Minhyuk;Yoo, Seung-hwan;Yoon, Kwang-sik
    • Journal of The Korean Society of Agricultural Engineers
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    • v.61 no.5
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    • pp.33-47
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    • 2019
  • The environmental ecological flow (EEF) of stream or river will be designated according to the enforcement of the Water Environment Preservation Act. Previous researches by Ministry of Environment have proposed agricultural reservoirs as alternative resources to secure river flow where multi-purpose dam does not exist. However, agricultural reservoirs are constructed for the supply of agricultural water, and in fact, there is not a sufficient amount of water to be supplied to rivers as EEF. Therefore, this study examines the economic feasibility of securing EEF through the remodeling or construction of agricultural reservoirs. We investigated water balance of reservoir through simulation of three types of water supply demands such as agricultural water, agricultural water and river maintenance flow, and agricultural water and environmental ecology flow. The economics analysis was conducted on water supply demands and corresponding remodeling or construction of reservoirs. As a result, it was found that the method of securing through heightening existing reservoir enhancement is economically feasible. However, it was not possible to secure all the amount of the EEF due to the size limitation of existing reservoirs or constrain of the watershed for newly built reservoir. Therefore, in order to secure all of the EEF, the utilization of other alternatives as well as agricultural reservoirs should be considered. This study demonstrated the method of economical feasibility study of securing river maintenace flow and EEF using agricultural reservoirs and other considerations.

Evaluation of Agricultural Reservoirs Operation Guideline Using K-HAS and Ratio Correction Factor during Flood Season (수리·수문설계시스템 및 비율보정계수 기법을 활용한 농업용 저수지의 홍수기 운영기준 평가)

  • Jung, Hyoung-mo;Lee, Sang-Hyun;Kim, Kyounghwan;Kwak, Yeong-cheol;Choi, Eunhyuk;Yoon, Sungeun;Na, Ra;Joo, Donghyuk;Yoo, Seung-Hwan;Yoon, Gwang-sik
    • Journal of The Korean Society of Agricultural Engineers
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    • v.63 no.4
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    • pp.97-104
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    • 2021
  • Despite the practical limitations of calculating the amount of inflow and supply related to the operation of agricultural reservoirs, the role of agricultural reservoirs is gradually being emphasized. In particular, as interest in disaster safety has increased, the demand for preliminary measures to prepare for disasters has been rising, for instance, pre-discharging agricultural reservoirs for flood control. The aim of this study is to analyze the plans for the flood season reservoir operation considering pre-discharge period and water level limit. Accordingly, we optimized the simulation of daily storage using the ratio correction factor (RCFs) and analyzed the amount of inflow and supply using K-HAS. In addition we developed the drought determination coefficient (k) as a indicator of water availability and applied it for supplementing the risk level criteria in the Drought Crisis Response Manual. The results showed that it would be difficult to set the water level limit during the flood period in the situation of little water supply for flood control in agricultural reservoirs. Therefore, it is necessary to operate the reservoir management regulations after measures such as securing additional storage water are established in the future.

Simulation of Water Redistribution for the Resized Beneficiary Area of a Large Scale Agricultural Reservoir (대규모 농업용저수지 수혜면적 변화에 따른 효율적 용수재분배 모의)

  • Sung, Muhong;Jeung, Minhyuk;Beom, Jina;Park, Taesun;Lee, Jaenam;Jung, Hyoungmo;Kim, Youngjoo;Yoo, Seunghwan;Yoon, Kwangsik
    • Journal of The Korean Society of Agricultural Engineers
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    • v.63 no.3
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    • pp.1-12
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    • 2021
  • Optimal water management is to efficiently and equally supply an appropriate amount of water by using irrigation facilities. Therefore, it is necessary to evaluate water supply capacity through distribution simulation between the designed distribution rate and re-distributed rate according to the changed farming conditions. In this study, we recalculated the agricultural water supply amount of Geumcheon main canal, which beneficiary area was reduced due to the development of Gwangju-Jeonnam innovation city, and we constructed a canal network using the SWMM model to simulate the change in supply rate of each main canal according to the re-distributed rate. Even though the supply amount of the Geumcheon main canal was reduced from 1.20 m3/s to 0.90 m3/s, it showed a similar supply rate to the current, and the reduced quantity could be supplied to the rest of the main canal. As a result, the arrival time at the ends of all main canal, except for the Geumcheon main canal, decreased from 1 to 3 hours, and the supply rate increased from 4 to 17.0% at the main canal located at the end of the beneficiary area of Naju reservoir.

Analysis of the Emergency Water Supply Capacity in Agricultural Reservoirs Using K-HAS and Ratio Correction Factors (K-HAS와 비율보정 계수를 이용한 농업용 저수지의 비상연계 용수공급 가능량 분석)

  • Kim, Hayoung;Lee, Sang-Hyun;Na, Ra;Joo, Donghyuk;Yoo, Seung-Hwan
    • Journal of The Korean Society of Agricultural Engineers
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    • v.65 no.2
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    • pp.59-71
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    • 2023
  • As the frequency of drought increases due to climate change, water scarcity in agriculture would be a main issue. However, it seems difficult to solve the water scarcity by securing alternative water sources. The aim of this study is to analyze optimal water supply capacity of agricultural reservoir for emergency operation connecting reservoirs and dams. First, we simulated the water storage of agricultural reservoir playing the role emergency water supplier to other water facility such as dams and other reservoirs. In particular, the results of simulation of water storage through K-HAS model was calibrated using the optimization process based on ratio correction factors of outflow and inflow. Finally, the optimal amount of water supply securing water supply reliability in emergency interconnection operation was analyzed. The results of this study showed that Janchi reservoir could supply 12.8 thousand m3/day maintaining 90 % water supply reliability. The result of this study could suggest the standard for connecting water facilities as emergency water supply.