• Title/Summary/Keyword: bacterial flora

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Identification of the bacterial composition in the rockworm gut and biofloc-fed adult gut flora beneficial for integrated multitrophic aquaculture

  • Jung, Hyun Yi;Kim, Chang Hoon;Kim, Joong Kyun
    • Fisheries and Aquatic Sciences
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    • v.24 no.9
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    • pp.297-310
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    • 2021
  • The rockworm gut flora was identified at each growth stage to elucidate the composition of the bacterial community. The source material was Marphysa sanguinea fed regular feed and fed biofloc at the adult stage in parallel. The systematic bacterial community composition was determined based on the next-generation sequencing method, and alpha diversity and beta diversity were conducted to access the species diversity within and between the bacterial communities, respectively. The composition of the gut flora changed considerably as the rockworms developed. The shift in the gut flora was confirmed at the phylum, family, and genera level of the bacterial communities. The Vibrio species associated with high rockworm mortality occupied 7.7% of the gut flora at the larval stage; however, they disappeared in the healthy adult gut. Moreover, different gut flora was observed between adults fed regular feed and those fed biofloc. Specifically in the biofloc-fed adult gut, several immune relevant and water-purifying bacteria were detected. The biofloc-fed adult gut flora could decompose and mineralize organic sediment, and thus be effectively utilized for integrated multitrophic aquaculture. The Venn diagram revealed that only two bacterial species were shared throughout all growth stages, and the biofloc-fed adults exhibited the highest diversity within the bacterial community.

The First Study on Bacterial Flora and Biological Control Agent of Anoplus roboris (Sufr., Coleoptera)

  • Demirbag, Zihni;Sezen, Kazim;Demir, Ismail
    • Journal of Microbiology
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    • v.40 no.2
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    • pp.104-108
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    • 2002
  • The hazelnut leaf holer (Anoplus roboris Sufr,, Coleoptera: Curculionidae) is a devastating pest of hazelnut and oak trees. It causes approximately 20-30% economic damage to hazelnut production per year in Turkey. In the present study, in order to fond a more effective and safe biological control agent against A. roboris, we investigated the bacterial flora of the hazelnut leave holer, and tested them for insecticidal effects on it. According to morphological, physiological and biochemical tests bacterial flora were identified as Bacillus circulans (Ar1), Bacillus polymyxa (Ar2), Enterobacter sp. (Ar3) and Bacillus sphaelicus (Ar4). Insecticidal effects of bacterial isolates were performed on adult A. roboris. The highest insecticidal effect determined was 67% by B. sphaericus within eight days. The insecticidal effects of the other isolates (Ar1, Ar2 and Ar3) were determined as 33%, 47% and 47% within the same period, respectively.

The Within-Host Population Dynamics of Normal Flora in the Presence of an Invading Pathogen and Antibiotic Treatments

  • Kim, Jung-Mo;Lee, Dong-Hwan;Song, Yoon-Seok;Kang, Seong-Woo;Kim, Seung-Wook
    • Journal of Microbiology and Biotechnology
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    • v.17 no.1
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    • pp.146-153
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    • 2007
  • A mathematical competition model between normal flora and an invading pathogen was devised to allow analysis of bacterial infections in a host. The normal flora includes the various microorganisms that live on or within the host and act as a primary human immune system. Despite the important role of the normal flora, no mathematical study has been undertaken on models of the interaction between it and invading pathogens against a background of antibiotic treatment. To quantify key elements of bacterial behavior in a host, pairs of nonlinear differential equations were used to describe three categories of human health conditions, namely, healthy, latent infection, and active infection. In addition, a cutoff value was proposed to represent the minimum population level required for survival. The recovery of normal flora after antibiotic treatment was also included in the simulation because of its relation to human health recovery. The significance of each simulation parameter for the bacterial growth model was investigated. The devised simulation showed that bacterial proliferation rate, carrying capacity, initial population levels, and competition intensity have a significant effect on bacterial behavior. Consequently, a model was established to describe competition between normal flora and an infiltrating pathogen. Unlike other population models, the recovery process described by the devised model can describe the human health recovery mechanism.

Characteristic of bacterial flora from the uterus in HanWoo cattle (정상 한우 및 번식장애 한우에 대한 자궁 내 세균 분석)

  • Kim, Kiju;Park, Soyeon;Cho, Youngjae;Jung, Bae-Dong;Park, Joung-Jun;Hahn, Tae-Wook
    • Korean Journal of Veterinary Research
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    • v.54 no.4
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    • pp.219-224
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    • 2014
  • Uterine sterilization is important for improving fertility in cattle. This study compared bacterial flora in the uterus between healthy and repeat breeder cows (RBCs). The uterine flushing of six heifers, 13 healthy HanWoo cows and eight RBCs (HanWoo) were sampled, and 15 frozen semen samples were selected. Overall, 35 bacteria were identified from in HanWoo uterine flushing and semen. The bacterial genera identified from HanWoo uterine flushing were Alloiococcus, Bacillus, Enterobacter, Enterococcus, Erysipelothrix, Gardnerella, Granulicatella, Kocuria, Pantoea, Pasteurella, Rothia, Serratia, Sphingomonas, Staphylococcus, Stenotrophomonas and Streptococcus. The bacterial genera identified from HanWoo semen were Bacillus, Escherichia, Kocuria, Oligella, Pseudomonas, Serratia, Sphingomonas, Staphylococcus, Stenotrophomonas and Streptococcus. The prevalence and presence of the identified bacteria between healthy cows and RBCs differed significantly. Further studies are needed to determine the role of these bacteria in the uterus of HanWoo cattle with reproductive disorder.

Studies on the Commensalism of Peptostreptococcus sp. with the Human Bacterial Flora (Peptostreptococcus sp.와 인체 서식균종과의 편이공생에 관한 연구)

  • 석종성
    • Korean Journal of Microbiology
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    • v.12 no.1
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    • pp.1-14
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    • 1974
  • The strain of Peptostreptococcus sp. S99 used in this study was isolated from the serous discharge of omphalitis of a 6 days old icteric male infant at the Clinical Laboratory of Microbiology, Seoul National University Hospital on June 9, 1973. The purpose of this study is to clarify the commensalism between Peptostreptococcus sp. and the human bacterial flora isolated from clinical specimens with special references to pH.

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A Study on Bacterial Flora Inhibiting in Crassostrea gigas and Its Living Environments. (참굴 및 그 서식환경의 세균 Flora에 관한 연구)

  • 강훈이
    • Microbiology and Biotechnology Letters
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    • v.7 no.3
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    • pp.175-179
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    • 1979
  • The present work was conducted in order to survey bacterial flora inhabiting in Crassostrea gigas. The Crassostrea gigas, sea water and mud of its living environments were sampled at Goseong bay, Gyungnam and Dolsan, Yeochon-gun, Chungnam at the period of from December 1978 to February 1979. The obtained results are summarized as follows: 1. The range of bacterial counts found in Crassostrea gigas, sea water and mud was respectively 10$^4$~10$^{6}$ , 10$^{5}$ ~10$^{6}$ and 10$^3$~10$^4$. 2. Among the bacterial 382 strains isolated from the those sample sources, Vibrio genus was 43.5%, Pseudomonas 16.7%, Moraxella 11.5% and Flavobacterium-cytophaga 8.9%. 3. Among 173 strains classified as Vibrio genus, 56% of them was found in Crassostrea gigas, 54% in mud and 25% in sea water. 4. Pseudomonas type I was found only in sea water and type III/IV found in sea water, mud and Crassostrea gigas. Especially type III/IV was found much in sea water.

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The Distribution of Bacterial Flora in Kunsan bay (군산 내만의 해양수에서 분리되는 세균의 분포)

  • Choi, Min-Soon;Shim, Hyun-Bin;Joung, Kyung-Min
    • Journal of fish pathology
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    • v.13 no.1
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    • pp.67-73
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    • 2000
  • This study was carried out to elucidate the preliminary ecosystem of the heterotrophic bacterial flora in Kunsan Bay located in western costal area of Korea. Samples were collected at 5 sampling stations. Among 123 bacterial isolates, 9 genera of bacteria were appeared as follows; Vibrio spp.(44 isolates/35.7%), Pseudomonas spp.(42 isolates/34.1%), Aeromonas spp.(11 isolates/8.9%), Moraxella spp.(9 isolates/7.3%), Enterobacteria spp.(6 isolates/4.8%), Bordetella spp.(3 isolates/2.4%), Alkaligenesis spp.(3 isolates/2.4%), Flavobacterium spp.(2 isolates/1.6%), and Staphylococcus spp.(3 isolates/2.4%) respectively. Total viable heterotrophic bacteria was ranged from $5{\times}10^3$ to $1{\times}10^5$ CFU/ml and the most abundant viable counts of bacterial population were showed at the stations 2 and 3. This result indicates that the coastal area around Kunsan bay is getting to contaminate far more by municipal wastewaters and industrial byproducts. and so the outbreak of the bacterial diseases will be increased in fish farms.

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Studies of Bacterial Flora of Rotifer sp., Artemia sp. and Olive Flounder larvae, Paralichthys olivaceus (넙치 자어, 로티퍼와 알테미아의 세균총에 관한 분석)

  • KIM, Myoung Sug;CHOI, Hye Sung;KIM, Na Young;JUNG, Sung Hee
    • Journal of Fisheries and Marine Sciences Education
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    • v.28 no.6
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    • pp.1828-1833
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    • 2016
  • The purpose of this research was to investigate the bacterial flora of healthy olive flounder larvae (Paralichthys olivaceus) and live feeds (Rotifer spp. and Artemia spp.). The total bacteria counts were $9.2{\times}10^7$ and $1.2{\times}10^{10}cfu/g$ and Vibrio sp.(82.8%) was dominant in rotifers. The total bacteria counts were $3.8{\times}10^6$ and $9.2{\times}10^6cfu/g$ and Vibrio sp.(73.3%) was dominant in artemia. In olive flounder larvae, the total bacteria counts were $1.4{\times}10^6{\sim}8.3{\times}10^7cfu/g$ and V. harveyi (38.5%) was dominant. It might be potential marker of disease outbreak in olive flounder larvae.

Effects of Pesticides on Soil Microflora -Changes of the Composition of Soil Bacterial Flora- (농약(農藥)이 토양미생물상(土壤微生物相)에 미치는 영향(影響) - 토양세균(土壤細菌)Flora의 구성변화(構成變化)에 대하여 -)

  • Yang, Chang-Sool
    • Korean Journal of Soil Science and Fertilizer
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    • v.18 no.2
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    • pp.221-226
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    • 1985
  • This investigation was undertaken to clarify the effects of consecutive application of insecticide (Hexachlorocyclohexane: HCH, 10 ppm each year) and fungicide (Tetrachloroisophthalonitrile: TPN, 40 ppm each year) on changes of the composition of soil bacterial flora in the experimental plots treated with each pesticide for two years. For these purposes, the isolating of bacterial cells growing on albumin agar plate was carried out with non-treated, HCH-treated and TPN-treated soil. And these isolated strains were grouping in accordance with the first diagnostic table of Cowan & Steel based on the morphological and physiological characteristics of bacterial cells. The mortality rate of bacteria was 30% in control, 44% in HCH and 51% in TPN plot respectively, in the process of obtaining pure culture. This suggests that the application of HCH or TPN enriched the fastidious bacteria in soil. The proportion of Gram-negative strains to the total isolates was 37% in control, 37% in HCH and 75% in TPN plot respectively. This means that the application of TPN enriched Gram-negative strains in soil. And the application of TPN increased the number of Gram-negative, nonspore-forming strains, and meanwhile decreased the number of spore-forming strains. In the results, the application of HCH or TPN changed considerably the composition of soil bacterial flora. And the influences of HCH and TPH on changes of the composition of soil bacterial flora were not equal each to each.

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Identification of Bacterial Flora on Cellular Phones of Dentists

  • Kwon, Ye Won;Lee, Si Young
    • International Journal of Oral Biology
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    • v.39 no.3
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    • pp.137-143
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    • 2014
  • Dental professionals are repeatedly exposed to many microorganisms present in both blood and saliva. Thus, dental professionals are at a greater risk of acquiring and spreading infections, and the implementation of infections control guidelines is necessary. Cellular phones have become a necessary device for communicating in hospitals. Cellular phones contaminated with bacteria may serve as a fomite in the transmission of pathogens by the hands of medical personnel. Nevertheless, studies about rate and levels of bacterial contamination of cellular phones have been extremely limited with regards to dental personnel. The purpose of this study was to identify bacterial flora on the cellular phones of dentists by a molecular biological method using the 16S rRNA cloning and sequencing method. We acquired total 200 clones from dentists' cell phones and identified the bacterial species. Pseudomonas (34.6%), Lactobacillus (18.5%), Azomonas (11.5%), and Janthinobacterium (6%) were the dominant genera on dentists' cell phones. The oral bacteria identified were Anaerococcus lactolyticus, Gibbsiella dentisursi, Lactobacills leiae, Streptococcus mitis, Streptococcus oligofermentans, and Streptococcus sanguinis. Pathogenic bacteria and opportunistic pathogens such as Carnobacterium funditum, Raoultella planticola, Shigella flexneri, Lactobacillus iners, Staphylococcus aureus, and Staphylococcus epidermidis were also identified.