• Title/Summary/Keyword: Yellow head virus

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Phylogenetic Characteristics of Yellow Head Virus (YHV) Genotype 8 Isolated from Fenneropenaeus chinensis in Korea (자연산 대하(Fenneropenaeus chinensis)에서 검출된 노랑머리 바이러스 Genotype 8의 계통분류학적 특성)

  • Jang, Gwang Il;Kim, Bo Sung;Oh, Yun Kyeong;Hwang, Jee Youn;Kwon, Mun Gyeong;Kim, Sumi
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.54 no.5
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    • pp.698-702
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    • 2021
  • Yellow head virus (YHV) is a rod-shaped positive-sense single-stranded RNA virus, classified into the genus Okavirus, family Roniviridae, and order Nidovirales. In this study, 200 fleshy prawns (Fenneropenaeus chinensis) collected from the vicinity of Narodo in Goheung-gun, Korea, were screened for the presence of yellow head complex viruses and related genotype such as YHV genotype 8. The detection rate of YHV genotype 8 among the 200 fleshy prawns, determined using nested RT-PCR (reverse transcription polymerase chain reation), was 39.0%. Phylogenetic analysis of the ORF1b gene of YHV showed that eight distinct genetic lineages were detected. The four strains of YHV genotype 8 obtained in this study formed a robust clade with the YHV genotype 8 group that was first isolated from fleshy prawns in China suspected to have acute hepatopancreatic necrosis disease (AHPND).

Monitoring of viruses (IHHNV, TSV, IMNV, YHV, and CMNV) in cultured whiteleg shrimp (Litopenaeus vannamei) between 2018 and 2019 (2018-2019년 양식산 흰다리새우의 바이러스 (IHHNV, TSV, IMNV, YHV, CMNV) 모니터링)

  • Kokkattunivarthil, Shyam;Kim, Wi-Sik
    • Journal of fish pathology
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    • v.33 no.1
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    • pp.71-75
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    • 2020
  • A survey was conducted to investigate viral infections in 184 whiteleg shrimp (Litopenaeus vannamei) collected from nine farms and one wholesale fish vendor during 2018 and 2019. Gill and abdominal muscle of shrimp were tested for the presence of five viruses, viz. infectious hypodermal and haematopoietic necrosis virus, taura syndrome virus, infectious myonecrosis virus, yellow head virus genotype 1, and covert mortality nodavirus by reverse transcription-polymerase chain reaction (RT-PCR) and PCR. These viruses were not detected in any of 184 samples, screened under the study.

Detection and genetic characteristic of Yellow-head virus genotype 8 (YHV-8) Cultured Litopanaeus vanamei, in Korea (국내 양식 흰다리새우에서 검출된 노랑머리바이러스(YHV-8)의 유전학적 특성)

  • Kim, Seok-Ryel;CWR, Gunasekara;SHMP, Wimalasena;Shin, Gee-Wook
    • Journal of fish pathology
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    • v.33 no.1
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    • pp.77-81
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    • 2020
  • This study was performed for screening yellow head virus(YHV) complex in 252 including 235 white leg shrimps (Litopenaeus vannamei) and 17 oriental shrimp (Fenneropenaeus chinensis) collected from 18 farms located in southwestern province of Korea. The virus complex was detected by nested reverse-transcriptase polymerase chain reaction (RT-PCR) assay. In the assay, amplicons were resulted in RNAs exracted from 38 shrimps (21 white leg shrimps and 17 oriental shrimps) obtained from 7 farms. In phylogenetic analysis using sequences of ORF1b gene, all 38 sequences obtained in this study formed an independent lineage with YHV-8 genotype firstly isolated in China, belonged to an YHV-8 clade.

Differentially expressed genes in Penaeus monodon hemocytes following infection with yellow head virus

  • Pongsomboon, Siriporn;Tang, Sureerat;Boonda, Suleeporn;Aoki, Takashi;Hirono, Ikuo;Yasuike, Motoshige;Tassanakajon, Anchalee
    • BMB Reports
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    • v.41 no.9
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    • pp.670-677
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    • 2008
  • A cDNA microarray composed of 2,028 different ESTs from two shrimp species, Penaeus monodon and Masupenaeus japonicus, was employed to identify yellow head virus (YHV)-responsive genes in hemocytes of P. monodon. A total of 105 differentially expressed genes were identified and grouped into five different clusters according to their expression patterns. One of these clusters, which comprised five genes including cathepsin L-like cysteine peptidase, hypothetical proteins and unknown genes, was of particular interest because the transcripts increased rapidly ($\leq$ 0.25 hours) and reached high expression levels in response to YHV injection. Microarray data were validated by realtime RT-PCR analyses of selected differentially expressed transcripts. In addition, comparative analysis of the hemocyte transcription levels of three of these genes between surviving and non-surviving shrimp revealed significantly higher expression levels in surviving shrimp.

Phylogenetic and pathogenic traits of YHV3 and IHHNV detected from imported frozen shrimp (수입 냉동새우에서 검출된 YHV3와 IHHNV의 계통학 및 병원성 분석)

  • Baek, Eun Jin;Joeng, Ye Jin;Jeong, Min A;Park, Ji Yeon;Kim, Kwang Il
    • Journal of fish pathology
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    • v.35 no.1
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    • pp.27-40
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    • 2022
  • Yellow head virus (YHV), Infectious hypodermal and hematopoietic necrosis (IHHNV), Taura syndrome virus (TSV), and Infectious myositis virus (IMNV) cause serious mortality to Penaeidae shrimp in the aquaculture. In this study, YHV, IHHNV, TSV, and IMNV were surveyed from imported frozen shrimps between 2019 and 2020 via molecular diagnostic assay. Among 10 shrimp groups, YHV (n=1) and IHHNV (n=4) were detected by RT-PCR and PCR, respectively. From the phylogenetic analysis based on the partial ORF 1b region of YHV, YHV was classified into YHV genotype 3 (YHV3). And IHHNVs (n=2) detected from Litopenaeus vannamei belong to infectious IHHNV type 2. Although IHHNVs (n=2) identified from Penaeus monodon showed PCR positive results (MG 831F/R primer set), the sequences of ORF 2 and 3 were not amplified, suggesting that those samples might possess type A IHHNV related sequence of P. monodon. Furthermore, in the challenge test, even though PCR-detected isolates (YHV3/type A IHHNV related sequence or infectious IHHNV type 2) were not induced mortality to L. vannamei, viral genes were amplified suggesting that the viruses in the frozen shrimp could be non-pathogenic particles which are not enough to induce mortality.

Effects on Growth and Yield of Korean Malting Barley Cultivars by Soil-borne Bymovirus Infection (맥류의 토양 전염성 Bymovirus의 감염이 국내 육성 맥주보리의 생육 및 수량에 미치는 영향)

  • Park, Jong-Chul;Kim, Mi-Jung;Lee, Eun-Sook;Park, Chul-Soo;Kang, Chun-Sik;Hyun, Jong-Nae;Lee, Jung-Joon;Kim, Tae-Soo;Kim, Ki-Jong
    • Research in Plant Disease
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    • v.16 no.1
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    • pp.21-26
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    • 2010
  • Viral diseases, especially Barley yellow mosaic virus (BaYMV) and Barley mild mosaic virus (BaMMV) have been most serious in barley fields. In this study, we investigated the effect of different level of resistance to viral diseases on the plant growth and yield in malting barley. In diagnosis of virus infection, BaYMV and BaMMV were detected in 'Doosan 29' (susceptible), however, 'Jinyangbori' (moderate susceptible) and 'Hopumbori' (moderate) was infected by only BaYMV. Plant height was restrained about 8~29% in overwintered plant regeneration stage depending on the resistant of each cultivar. The culm length damaged also to 9~12% by BaYMV infection. The tiller numbers reduced to 10~14% in overwintering season, however, the head numbers in harvest season more decreased to 26~33%. Heading date was delayed to 3~3 days by the infection. In examination of yield components, 1,000 kernel weight and $\ell$ weight reduced according to culrivar's resistant degrees to 4.0~6.4% and 1.0~4.2%, respectively. The yield of abortive grain was doubled in BaYMV infection comparing to non-infested field. Three varieties tested in the non-infected field over two years were not significantly different for yield potential with ranges of 509kg~632kg/10a. However, significant yield reduction was observed in 'Saessalbori' and 'Baegdong' with ranges of 77~177kg/10a as compared to 'Hopumbori' (467 kg/10a) when tested in the virus-infected field. Yield potentials of these cultivars reduced by 26~43%, respectively, in the virus-infected field as compared to those in the non-infected field.