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http://dx.doi.org/10.5657/KFAS.2021.0698

Phylogenetic Characteristics of Yellow Head Virus (YHV) Genotype 8 Isolated from Fenneropenaeus chinensis in Korea  

Jang, Gwang Il (Aquatic Disease Control Division, National Fishery Products Quality Management Service (NFQS))
Kim, Bo Sung (Aquatic Disease Control Division, National Fishery Products Quality Management Service (NFQS))
Oh, Yun Kyeong (Aquatic Disease Control Division, National Fishery Products Quality Management Service (NFQS))
Hwang, Jee Youn (Aquatic Disease Control Division, National Fishery Products Quality Management Service (NFQS))
Kwon, Mun Gyeong (Aquatic Disease Control Division, National Fishery Products Quality Management Service (NFQS))
Kim, Sumi (Aquatic Disease Control Division, National Fishery Products Quality Management Service (NFQS))
Publication Information
Korean Journal of Fisheries and Aquatic Sciences / v.54, no.5, 2021 , pp. 698-702 More about this Journal
Abstract
Yellow head virus (YHV) is a rod-shaped positive-sense single-stranded RNA virus, classified into the genus Okavirus, family Roniviridae, and order Nidovirales. In this study, 200 fleshy prawns (Fenneropenaeus chinensis) collected from the vicinity of Narodo in Goheung-gun, Korea, were screened for the presence of yellow head complex viruses and related genotype such as YHV genotype 8. The detection rate of YHV genotype 8 among the 200 fleshy prawns, determined using nested RT-PCR (reverse transcription polymerase chain reation), was 39.0%. Phylogenetic analysis of the ORF1b gene of YHV showed that eight distinct genetic lineages were detected. The four strains of YHV genotype 8 obtained in this study formed a robust clade with the YHV genotype 8 group that was first isolated from fleshy prawns in China suspected to have acute hepatopancreatic necrosis disease (AHPND).
Keywords
Fenneropenaeus chinensis; Yellow head disease (YHD); Yellow head virus (YHV) genotype 8; Phylogenetic analysis;
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