• Title/Summary/Keyword: Wright's $F_{ST}$

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An Influence of Japanese Culture on F. L. Wright′s Organic Architecture (F. L. 라이트의 유기적 건축에 나타난 일본문화의 영향에 관한 연구)

  • 이권영;서치상
    • Korean Institute of Interior Design Journal
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    • v.13 no.5
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    • pp.11-20
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    • 2004
  • F. L. Wright was, from his early days, influenced by Japanese Culture and endeavored his original concept of orgonic orchitecture. In his 1st Golden Age, he devoted to establish an architectural concept of Organism which was proved by the theories of New Science and also had been universal in ancient Orient. Later, in his 2nd Golden Age, he tried to embody his unique concept in prairie houses and office buildings. The organic structure and spatial unit that actually applied to these works, were good examples of realization of the simplicity and continuity which he found out in Japanese culture. This paper is to study on the influence of Japanese culture on a course of Wright's embodying his organic architecture, and to study on a way of its realization in his works. To be concrete, main contents of the study are as follows; 1) the relationship between Wright's integrate perception and the orientalism 2) the influence of the traditional Japanese painting like woodblock prints and the aesthetic theory of the traditional Japanese pictorial art on Wright's design principles 3) the influence of Wright's experiences in Japan on his design principles 4) the influence of Wright's analysis of the traditional Japanese dwelling on his design principles 5) the course of Wright's embodying his organic architecture concept, and the way of its realization in his works.

A Study on the Organic Concept of Frank Lloyd Wright's Architecture and Furniture Design (프랭크 로이드 라이트의 건축과 가구디자인의 유기성 연구)

  • Baik, Eun;Lee, Hyun-Jung
    • Journal of the Korea Furniture Society
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    • v.20 no.2
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    • pp.154-165
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    • 2009
  • Frank Lloyd Wright is an architect who established the concept of organic architecture and in his organic architectures, he applied studies on the inflow, growth and development of natural elements of shapes, pursued naturalism in the shapes and functions and connected them organically with each other. His furniture as appeared in his constructions shows geometric plasticity based on naturalism and achieves an integration of shapes, materials and functions while forming a space. The organic nature from the viewpoint of digital which is a new concept of the 21st century is greatly affecting construction and furniture designs. Designs having new organic concepts are emerging in furniture which is organically related with construction to achieve organic harmony with new plastic spaces. Therefore, studies on Wright are more significant as a cornerstone for new theories under development.

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Identifying Copy Number Variants under Selection in Geographically Structured Populations Based on F-statistics

  • Song, Hae-Hiang;Hu, Hae-Jin;Seok, In-Hae;Chung, Yeun-Jun
    • Genomics & Informatics
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    • v.10 no.2
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    • pp.81-87
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    • 2012
  • Large-scale copy number variants (CNVs) in the human provide the raw material for delineating population differences, as natural selection may have affected at least some of the CNVs thus far discovered. Although the examination of relatively large numbers of specific ethnic groups has recently started in regard to inter-ethnic group differences in CNVs, identifying and understanding particular instances of natural selection have not been performed. The traditional $F_{ST}$ measure, obtained from differences in allele frequencies between populations, has been used to identify CNVs loci subject to geographically varying selection. Here, we review advances and the application of multinomial-Dirichlet likelihood methods of inference for identifying genome regions that have been subject to natural selection with the $F_{ST}$ estimates. The contents of presentation are not new; however, this review clarifies how the application of the methods to CNV data, which remains largely unexplored, is possible. A hierarchical Bayesian method, which is implemented via Markov Chain Monte Carlo, estimates locus-specific $F_{ST}$ and can identify outlying CNVs loci with large values of FST. By applying this Bayesian method to the publicly available CNV data, we identified the CNV loci that show signals of natural selection, which may elucidate the genetic basis of human disease and diversity.

Genetic Variation of Pinus densiflora Populations in South Korea Based on ESTP Markers (ESTP 표지를 이용한 국내 소나무 집단의 유전변이)

  • Ahn, Ji Young;Hong, Kyung Nak;Lee, Jei Wan;Hong, Yong Pyo;Kang, Hoduck
    • Korean Journal of Plant Resources
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    • v.28 no.2
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    • pp.279-289
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    • 2015
  • Genetic diversity and genetic differentiation of thirteen Pinus densiflora populations in South Korea were estimated using nine ESTP (Expressed Sequence Tag Polymorphism) markers. The numbers of allele and the effective allele were 2.2 and 1.8, respectively. The percentage of polymorphic loci (P) was 98.8%. The observed and the expected heterozygosity were 0.391 and 0.402, respectively, and the eleven populations except for Ahngang and Gangneung population were under Hardy-Weinberg equilibrium state. The level of genetic differentiation (Wright’s FST = 0.057) was higher than those of isozyme or nSSR markers. We could not find out any relationship between the genetic distance and geographic distribution among populations from cluster analysis. Also, the genetic differentiation between populations was not correlated with the geographic distance (r = 0.017 and P = 0.344 from Mantel test). From the result of FST-outlier analysis to identify a locus under selection, six loci were detected at confidence interval of 99% by the frequentist’s method. However, only three loci (sams2+AluⅠ, sams2+RsaⅠ, PtNCS_p14A9+HaeⅢ) were presumed as outliers by Bayesian method. The sams2+AluⅠ and sams2+RsaⅠlocus were originated from the sams2 gene and seemed to be the loci under balancing selection.

Genetic Diversity and Population Structure of Kaloula borealis (Anura, Microhylidae) in Korea

  • Yang, Suh-Yung;Kim, Jong-Bum;Min, Mi-Sook;Suh, Jae-Hwa;Kang, Young-Jin
    • Animal cells and systems
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    • v.4 no.1
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    • pp.39-44
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    • 2000
  • To assess the genetic diversity and population structure of Korean K. borealis, allozyme analysis was performed. The average genetic variability of Korean K. borealis populations was %P=13.2, Ho=0.048, and He=0.045. This value was the lowest in comparison with other Korean amphibian species studied. Also, the value was much lower than that of a reference population from Chinese K. borealis (%P=50, Ho=0.125, He=0.172). Wright's F-statistics showed that Korean K. borealis has distinctly low level of gene flow among regional populations (F$_{ST}$=0.339, Nm=0.487) in comparison with other Korean amphibian species studied. However, the average level of genetic divergence among Korean K. borealis populations was moderate (Nei's D=0.020). Therefore, it appeared that low levels of genetic diversity (He=0.045) and gene flow (Nm=0.487) among regional populations ave probably due to the results of decreasing population size and patchy distribution of this species in Korea.

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Genetic Variation of the Beet Armyworm, Spodoptera exigua (Hubner), Populations in Korea Using Polymorphic Allozymes (다형 동위효소를 이용한 국내 파밤나방(Spodoptera exigua (Hubner)) 집단의 유전변이)

  • 강성영;김용균
    • Korean journal of applied entomology
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    • v.40 no.3
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    • pp.235-243
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    • 2001
  • Genetic variation of the beet armyworm, Spodoptera exigua (Hubner), was analyzed by polymorphic allozymes. Field populations were subdivided by different hosts, geographical locations, and seasons. Estimated average heterozygosity ($0.443\pm$0.013) indicated high genetic variation in all field populations of S. exigua. There were significant inbreeding effects deviated from Hardy-Weinberg equilibrium in each of subpopulations. These significant nonrandom matings were caused by within-subpopulations probably due to sampling errors, but not by mating isolation among subpopulations. Wrights ($F_{ST}$ ) and Neis (D) genetic distances indicated little genetic differentiation among subpopulations, though some southern local subpopulations (Haenam and Sachon) were relatively different of northern subpopulations (Andong and Kunwi). Estimated number of migrants per generation was 5.9 among host subpopulations, 10.6 among geographical subpopulations, and 31.8 among seasonal subpopulations. These genetic analyses suggest that Korean S. exigua subpopulations have little genetic differentiation mostly due to their significant migratory capacity.

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Genetic Diversity and Population Genetic Structure of Cephalotaxus koreana in South Korea

  • Hong, Kyung Nak;Kim, Young Mi;Park, Yu Jin;Lee, Jei Wan
    • Korean Journal of Plant Resources
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    • v.27 no.6
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    • pp.660-670
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    • 2014
  • The Korean plum yew (Cephalotaxus koreana Nakai) is a shade-tolerant, coniferous shrub. The seeds have been used as a folk medicine in Korea, and an alkaloid extract (HTT) is known to have anticancer properties. We estimated the genetic diversity of 429 trees in 16 populations in South Korea using 194 polymorphic amplicons from seven combinations of AFLP primer-restriction enzymes. The average number of effective alleles and the percentage of polymorphic loci were 1.37 and 79.4%, respectively. Shannon's diversity index and the expected heterozygosity were 0.344 and 0.244, respectively. We divided 16 populations into four groups on the UPGMA dendrogram and the PCA biplot. The first two principal components explained 84% of the total genetic variation. Genetic differentiation between populations explained 14% of total genetic variation, and the remaining 86% came from difference between individuals within populations, as determined by an analysis of molecular variance (AMOVA). However, the genetic differentiation did not correlate with the geographic distance between populations from the Mantel test. The Bayesian statistics, which are comparable to Wright's $F_{ST}$ and Nei's $G_{ST}$, were ${\theta}^I=0.406$ and ${\theta}^{II}=0.172$, respectively. The population genetic diversity was slightly lower, and the strength of genetic differentiation was much weaker, than the average of those plants having similar life histories, as assessed using arbitrary marker systems. We discuss strategies for the genetic conservation of the plum yew in Korea.

Genetic diversity and structure of natural populations of Picea jezoensis in South Korea

  • Lee, Seok Woo;Yang, Byeong Hoon;Hur, Seong Doo;Lee, Jung Joo;Song, Jeong Ho;Moriguchi, Yoshinari
    • Journal of Korean Society of Forest Science
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    • v.97 no.2
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    • pp.187-195
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    • 2008
  • Picea jezoensis (Sieb. et Zucc.) Carriere is one of the major and widespread components of the cold-temperate and boreal forests in Russian Far East, northeast China, Korea, and Japan. However, it is restricted to a highly fragmented range in South Korea with small populations. Mean expected heterozygosity $(H_e)$ based on 22 loci in 11 isozyme systems was 0.077 for four sampled populations that covered the whole distribution range of P. jezoensis in South Korea. This value is within the range reported for conifers, but it is very low compared to that of other spruce species as well as that of P. jezoensis populations in Russian Far East. Most populations had a slight excess of heterozygotes and the Wright's $F_{IS}$ (-0.019) was comparable to that previously reported for other spruce species. In all of the four populations, the Wilcoxon sign-rank test indicated no greater heterozygosity than that expected for populations at mutation-drift equilibrium, suggesting that the populations have not been bottlenecked recently. Despite a fragmented range and isolated populations, population differentiation was not high $(F_{ST}=0.047)$ and the number of migrants per generation was 5.09. Nei's genetic distances were also small $({\bar{D}}=0.005)$ but strongly related to geographic distances between populations, suggesting an Isolation by Distance. The northernmost isolate, Mt. Gyebang population was genetically distinct from the other three populations. Implications for the conservation of genetic variation of P. jezoensis in South Korea were discussed.