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Genetic diversity and structure of natural populations of Picea jezoensis in South Korea  

Lee, Seok Woo (Department of Forest Genetic Resources, Korea Forest Research Institute)
Yang, Byeong Hoon (Department of Forest Genetic Resources, Korea Forest Research Institute)
Hur, Seong Doo (Department of Forest Genetic Resources, Korea Forest Research Institute)
Lee, Jung Joo (Department of Forest Genetic Resources, Korea Forest Research Institute)
Song, Jeong Ho (Department of Forest Genetic Resources, Korea Forest Research Institute)
Moriguchi, Yoshinari (Department of Forest Genetic Resources, Korea Forest Research Institute)
Publication Information
Journal of Korean Society of Forest Science / v.97, no.2, 2008 , pp. 187-195 More about this Journal
Abstract
Picea jezoensis (Sieb. et Zucc.) Carriere is one of the major and widespread components of the cold-temperate and boreal forests in Russian Far East, northeast China, Korea, and Japan. However, it is restricted to a highly fragmented range in South Korea with small populations. Mean expected heterozygosity $(H_e)$ based on 22 loci in 11 isozyme systems was 0.077 for four sampled populations that covered the whole distribution range of P. jezoensis in South Korea. This value is within the range reported for conifers, but it is very low compared to that of other spruce species as well as that of P. jezoensis populations in Russian Far East. Most populations had a slight excess of heterozygotes and the Wright's $F_{IS}$ (-0.019) was comparable to that previously reported for other spruce species. In all of the four populations, the Wilcoxon sign-rank test indicated no greater heterozygosity than that expected for populations at mutation-drift equilibrium, suggesting that the populations have not been bottlenecked recently. Despite a fragmented range and isolated populations, population differentiation was not high $(F_{ST}=0.047)$ and the number of migrants per generation was 5.09. Nei's genetic distances were also small $({\bar{D}}=0.005)$ but strongly related to geographic distances between populations, suggesting an Isolation by Distance. The northernmost isolate, Mt. Gyebang population was genetically distinct from the other three populations. Implications for the conservation of genetic variation of P. jezoensis in South Korea were discussed.
Keywords
genetic variation; isozyme; Picea jezoensis; gene conservation;
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1 Aitken, S.N. and Libby, W.T. 1994. Evolution of the pygmy-forest edaphic subspecies of Pinus contorta across an ecological staircase. Evolution 48: 1009-1019   DOI   ScienceOn
2 Klekowski, E.J. Jr and Godfrey, P.J. 1989. Aging and mutation in plants. Nature 340: 389-391   DOI
3 Kong, W.S. 2003. Vegetation History of the Korean Peninsula. Acanet, Seoul (in Korean)
4 Kong, W.S. and Watts, D. 1993. Geobotany 19: The Plant Geography of Korea with an Emphasis on the Alpine Zones. Kluwer Academic Publishers, Dordrecht
5 Ledig, F.T. 2000. Founder effects and genetic structure of Coulter pine. J. Hered. 91: 307-315   DOI   ScienceOn
6 Ledig, F.T., Bermejo-Velazquez, B., Hodgskiss, P.D., Johnson, D.R., Flores-Lopez, C. and Jacob-Cervantes, V. 2000. The mating system and genic diversity in Martinez spruce, an extremely rare endemic of Mexico's Sierra Madre Oriental: an example of facultative selfing and survival in interglacial refugia. Can. J. For. Res. 30: 1156-1164   DOI
7 Li, P. and Adams, W.T. 1989. Range-wide patterns of allozyme variation in Douglas fir (Pseudotsuga menziesii). Can. J. For. Res. 19: 149-161   DOI
8 Slatkin, M. and Barton, N.H. 1989. A comparison of three indirect methods for estimating average levels of gene flow. Evolution 43: 1349-1368   DOI   ScienceOn
9 Rousset, F. 1997. Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance. Genetics 145: 1219-1228
10 Conkle, M.T., Hodgskiss, P.D., Nunnally, L.B. and Hunter, S.C. 1982. Starch gel electrophoresis of pine seed: a laboratory manual. USDA Forest Service General Technical Report PSW-64. Pacific Southwest Forest and Range Experiment Station, Berkeley, California, USA
11 Whitlock, M.C. and McCauley, D.E. 1999. Indirect measures of gene flow and migration: FST 1/(4Nm+1). Heredity 82: 117-125   DOI
12 Hamrick, J.L., Godt, M.J.W. and Shermann-Broymes, S.L. 1992. Factors influencing levels of genetic diversity in woody plant species. New. For. 6: 95-124   DOI   ScienceOn
13 Weeden, N.F. and Wendel, J.F. 1989. Genetics of plant isozymes, In: Soltis D.E. and Soltis P.S. (Eds.), Isozymes in Plant Biology, Dioscorides Press, Portlad, Oregon, pp. 46-72
14 Wright, S. 1978. Variability within and among Natural Populations. Vol. 4. The Univ. of Chicago Press, Chicago
15 Goncharenko, G.G., Zadeika, I.V. and Birgelis, J.J. 1995. Genetic structure, diversity and differentiation of Norway spruce (Picea abies (L.) Karst.) in natural populations of Latvia. Forest Ecology and Management 72: 31-38   DOI   ScienceOn
16 Kim, Z.S., Yi, C.H. and Lee, S.W. 1994. Genetic variation and sampling strategy for conservation in Pinus species., In: Kim Z.S. and Hattemer H.H. (Eds.), Conservation and manipulation of genetic resources in Forestry, Kwang Moon Kag, Seoul, pp. 294-321
17 Furnier, G.R. and Adams, W.T. 1986. Geographic patterns of allozyme variation in Jeffrey pine. American Journal of Botany 73: 1009-1015   DOI   ScienceOn
18 Bohonak, A.J. 2002. IBD (Isolation By Distance): a program for analyses of isolation by distance. J. Hered. 93: 153-154   DOI   ScienceOn
19 Mantel, N. 1967. The detection of disease clustering and a generalized regression approach. Cancer Research 27: 209-220
20 Luikart, G. and Cornuet, J.M. 1998. Empirical evaluation of a test for identifying recently bottlenecked populations from allele frequency data. Conserv. Biol. 12: 228-237   DOI   ScienceOn
21 Weir, B.S. and Cockerham, C.C. 1984. Estimating Fstatistics for the analysis of population structure. Evolution 38: 1358-1370   DOI   ScienceOn
22 Potenko, V.V. 2007. Allozyme variation and phylogenetic relationships in Picea jezoensis (Pinaceae) populations of the Russian Far East. Biochemical Genetics 45: 291-303. DOI: 10.1007/s10528-006-9075-5   DOI
23 Marshall, D.R. and Brown, A.H.D. 1975. Optimum sampling strategies for gene conservation, In: Frankel O.H. and Hawkes J.G. (Eds.), Crop Genetic Resources for Today and Tomorrow, Cambridge University Press, Cambridge, London, pp. 53-80
24 Sneath, P.H.A. and Sokal, R.R. 1973. Numerical taxonomy. Freeman, San Francisco
25 Gamache, I., Jaramillo-Correa, J.P., Payette, S. and Bousquet, J. 2003. Diverging patterns of mitochondrial and nuclear DNA diversity in subarctic black spruce:imprint of a founder effect associated with postglacial colonization. Molecular Ecology 12: 891-901   DOI   ScienceOn
26 Nei, M. 1975. Molecular Population Genetics and Evolution. North-Holland Publishing Co., Amsterdam
27 Cheliak, W.M. and Pitel, J.A. 1984. Genetic control of allozyme variants in mature tissues of white spruce trees. J. Hered. 75: 34-40   DOI
28 Farjon, A. 1990. Pinaceae: Drawings and Descriptions of the Genera Abies, Cedrus, Pseudolarix, Keteleeria, Nothotsuga, Tsuga, Cathaya, Pseudotsuga, Larix and Picea. Koeltz Scientific Books, Konigstein
29 Ledig, F.T., Jacob-Cervantes, V., Hodgskiss, P.D. and Eguiluz-Piedra, T. 1997. Recent evolution and divergence among populations of a rare Mexican endemic, Chihuahua spruce, following Holocene climate warming. Evolution 51(6): 1815-1827   DOI   ScienceOn
30 Aizawa, M., Yoshimaru, H., Saito, H., Katsuki, T., Kawahara, T., Kitamura, K., Shi, F. and Kaji, M. 2007. Phylogeography of a northeast Asian spruce, Picea jezoensis, inferred from genetic variation observed in organelle DNA markers. Molecular Ecology DOI:10.1111/J.1365- 294X.2007.03391.x
31 Yeh, F.C. and Boyle, T. 1999. POPGENE Version 1.31, http://www.ualberta.ca/~fyeh/
32 Beaulieu, J. and Simon, J.P. 1994. Genetic structure and variability in Pinus strobus L. in Quebec. Can. J. For. Res. 24: 1733-1736
33 Lee, T.B. 1990. Dendrology, 4th ed. Hyang Moon Sa, Seoul (in Korean)
34 Goudet, J. 2001. FSTAT, a program to estimate and test gene diversities and fixation indices (version 2.9.3). Available from http://www.unil.ch/izea/softwares/fstat.html
35 Ledig, F.T., Hodgskiss, P.D. and Johnson, D.R. 2006. Genetic diversity and seed production in Santa Lucia fir (Abies bracteata), a relict of the Miocene broadleaved evergreen forest. Coservation Genetics 7: 383- 398. DOI: 10.1007/s10592-005-9049-x   DOI
36 Piry, S., Luikart, G. and Cornuet, J.M. 1999. BOTTLENECK: a computer program for detecting recent reduction in the effective population size using allele frequency data. J. Hered. 90: 502-503   DOI
37 NEI, M., 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590
38 Potenko, V.V. and Knysh, Y.D. 2003. Genetic variation of Yeddo spruce populations in Russia, Forest Genetics 10(1): 55-64
39 Gapare, W.J., Aitken, S.N. and Ritland, C.E. 2005. Genetic diversity of core and peripheral Sitka spruce (Picea sitchensis (Bong.) Carr) populations: implications for conservation of widespread species. Biological Conservation 123: 113-123   DOI   ScienceOn
40 Kimura, M. and Crow, J.F. 1964. The number of alleles that can be maintained in a finite population. Genetics 49: 725-738