• 제목/요약/키워드: Wild strain

검색결과 608건 처리시간 0.022초

Search for Novel Stress-responsive Protein Components Using a Yeast Mutant Lacking Two Cytosolic Hsp70 Genes, SSA1 and SSA2

  • Matsumoto, Rena;Rakwal, Randeep;Agrawal, Ganesh Kumar;Jung, Young-Ho;Jwa, Nam-Soo;Yonekura, Masami;Iwahashi, Hitoshi;Akama, Kuniko
    • Molecules and Cells
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    • 제21권3호
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    • pp.381-388
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    • 2006
  • Heat shock proteins (Hsp) 70 are a ubiquitous family of molecular chaperones involved in many cellular processes. A yeast strain, ssa1/2, with two functionally redundant cytosolic Hsp70s (SSA1 and SSA2) deleted shows thermotolerance comparable to mildly heatshocked wild type yeast, as well as increased protein synthesis and ubiquitin-proteasome protein degradation. Since mRNA abundance does not always correlate well with protein expression levels it is essential to study proteins directly. We used a gel-based approach to identify stress-responsive proteins in the ssa1/2 mutant and identified 43 differentially expressed spots. These were trypsin-digested and analyzed by nano electrospray ionization liquid chromatography tandem mass spectrometry (nESI-LC-MS/MS). A total of 22 non-redundant proteins were identified, 11 of which were confirmed by N-terminal sequencing. Nine proteins, most of which were up-regulated (2-fold or more) in the ssa1/2 mutant, proved to be stress-inducible proteins such as molecular chaperones and anti-oxidant proteins, or proteins related to carbohydrate metabolism. Interestingly, a translational factor Hyp2p up-regulated in the mutant was also found to be highly phosphorylated. These results indicate that the cytosolic Hsp70s, Ssa1p and Ssa2p, regulate an abundance of proteins mainly involved in stress responses and protein synthesis.

자외선 조사에 의해 유도된 미세조류 Arthrospira platensis 변이주의 특성 (Characterization of Arthrospira platensis Mutants Generated by UV-B Irradiation)

  • 박현진;김영화;이재화
    • 공업화학
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    • 제23권5호
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    • pp.496-500
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    • 2012
  • Arthrospira platensis (A. platensis)는 상업적으로 중요한 사상형 미세조류이다. 화학적 혹은 물리적 돌연변이원에 의해 유도된 변이주 분리는 균주 개량에 중요하게 작용한다. 본 연구에서, A. platensis에서 자외선(UV-B)조사에 따른 영향을 살펴보았고, 그에 따른 변이주를 확보하였다. A. platensis를 자외선(15 Watt, 254 nm)을 이용하여 1, 3, 5, 10 min 동안 처리 한 후, 얻어진 변이주를 각각 UM1, UM3, UM5, UM10으로 명명하였다. 특히, UM5 변이주는 야생균주와 비교하여 지질의 함량이 8~11배 가량 크게 증가하였다. 또한, 카로티노이드 함량과 항산화 효소(peroxidase, superoxide dismutase) 활성이 증가하였다. 이 결과, 자외선에 의해 유도된 변이주는 생리활성 물질을 축적하였으며, 이러한 유용성분을 생산하는 미세조류의 균주 개발은 미세조류의 산업화를 촉진시킬 것으로 기대된다.

Heterologous Expression of Human $\beta$-Defensin-1 in Bacteriocin-Producing Laetoeoeeus lactis

  • CHOI HAK JONG;SEO MYUNG JI;LEE JUNG CHOUL;CHEIGH CHAN ICK;PARK HOON;AHN CHEOL;PYUN YU RYANG
    • Journal of Microbiology and Biotechnology
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    • 제15권2호
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    • pp.330-336
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    • 2005
  • Lactococcus lactis A164 is a nisin Z-producing strain isolated from kimchi. Its antimicrobial spectrum has been found to be active against most Gram-positive bacteria tested, yet inactive against Gram-negative bacteria [3]. Accordingly, to overcome this drawback, the current study attempted to express human $\beta$-defensin-l (hBD-l), which kills both Gram-positive and Gram-negative bacteria in L. lactis AI64. When the hBD-l cDNA was introduced using a nisin Z-controlled expression cassette, the L. lactis A164 transformants grew very poorly, due to the bactericidal effect of the expressed hBD-l against the transformants. Therefore, a gene fusion system was designed to reduce the toxicity of the expressed heterologous protein against the host cells. As such, the hBD-l gene was fused to the DsbC- Tag of pET -40b(+), then introduced to L. lactis A 164. The transformants expressed an intracellular 35.6-kDa DsbC-hBD-l fusion protein that exhibited slight activity against the host cells, yet not enough to strongly inhibit the cell growth. To obtain the recombinant hBD-l, the DsbC-hBD-l fusion protein was purified by nickel-affinity column chromatography, and the DsbC-Tag removed by cleaving with enterokinase. The cleaved mature hBD-l exhibited strong bactericidal activity against E. coli JM109, indicating that the recombinant L. lactis A 164 produced a biologically active hBD-I. In addition, the recombinant L. lactis A 164 was also found to produce the same level of nisin Z as the wild-type.

외래 알파아밀라제의 Saccharomyces cerevisiae에서의 생산과 분비효율의 증진 (Improvement of Production and Secretion of Heterologous \alpha-Amylase from Saccharomyces cerevisiae.)

  • 최성호;김근
    • 한국미생물·생명공학회지
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    • 제31권1호
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    • pp.36-41
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    • 2003
  • Saccharomyces cerevisiae로부터 외래 $\alpha$-amylase의 발현 및 분비를 증진시키기 위하여 여러 실험이 수행되었다. ADC1 promoter와 mouse salivary $\alpha$-amylase cDNA gene의 native signal sequence를 효모의 PRB1 promoter와 invertase leader sequence로 대치한 plasmid vector pCNN(AMY)를 제작하였다. 효모세포에서 생성된 $\alpha$-amylase의 세포외로의 분비율은 mouse o-amylase의 native signal sequence인 경우는 약 89.4%이었으며 invertase leader sequence로 치환된 경우는 96.3%로 분비효율이 증진되었다. 야생주인 K8l/pCNN(AMY)와 호흡결여변이주인 K81/pCNN(AMY)p-의 혐기적 조건하에서의 배양 결과 $\alpha$-amylase 생산량이 K8l/pCNN(AMY)보다 K81/pCNN(AMY)p-가 약 5~8배 정도 증가하였다. $\alpha$-Amylase의 생산에 있어서 배지조성에 따른 K81/pCNN(AMY)의 생산증진의 비교는 배지성분인 yeast extract와 peptone의 구성비율을 비교하였을 때 yeast extract 1%와 peptone 2%, NaCl의 경우 100 mM, 2-mercaptoethanol인 경우에는 0.015%(w/v)을 첨가하였을 때 최대 효소 활성을 나타내었고, 특히 2-mercaptoethanol인 경우에는 대조구에 비해 효소 생산량이 약 3배 정도 증진되었다.

Screening of Growth- or Development-related Genes by Using Genomic Library with Inducible Promoter in Aspergillus nidulans

  • Lee Bang-Yong;Han Sang-Yong;Choi Han Gil;Kim Jee Hyun;Han Kap-Hoon;Han Dong-Min
    • Journal of Microbiology
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    • 제43권6호
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    • pp.523-528
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    • 2005
  • Using the genomic library constructed at the downstream of the niiA promoter, which induces the over-expression of an inserted DNA fragment, we have attempted to screen the genes affecting growth or development by over-expression. The wild-type strain was transformed using the AMA-niiA(p) library and cultured on 1.2 M sorbitol media, in which asexual sporulation is induced, but sexual development is repressed. Over 100,000 strains transformed to $pyrG^+$ were analyzed with regard to any changes in phenotype. Consequently, seven strains were isolated for further analyses. These strains were designated NOT [niiA(p) over-expression transformants] stains. Four of the strains were of the inducible type, and the remaining strains were of the multi-copy suppression type. Two of the inducible-type strains, NOT 1 and NOT40, harbored genes which had been inserted in reverse direction, suggesting that the mutant phenotypes had been derived from an excess amount of anti-sense mRNA. Domain analyses of the deduced polypeptides from the DNA fragments rescued from the transformants revealed that NOT1, NOT40 and NOT6 harbored a LisH motif, a forkhead domain, and a $Zn(II)_2Cys_6$ binuclear zinc cluster, respectively.

Heterologous Expression and Characterization of a Thermostable Exo-β-D-Glucosaminidase from Aspergillus oryzae

  • Wu, Dingxin;Wang, Linchun;Li, Yuwei;Zhao, Shumiao;Peng, Nan;Liang, Yunxiang
    • Journal of Microbiology and Biotechnology
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    • 제26권2호
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    • pp.347-355
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    • 2016
  • An exo-β-D-glucosaminidase (AorCsxA) from Aspergillus oryzae FL402 was heterologously expressed and purified. The deduced amino acid sequence indicated that AorCsxA belonged to glycoside hydrolase family 2. AorCsxA digested colloid chitosan into glucosamine but not into chitosan oligosaccharides, demonstrating exo-β-D-glucosaminidase (CsxA) activity. AorCsxA exhibited optimal activity at pH 5.5 and 50℃; however, the enzyme expressed in Pichia pastoris (PpAorCsxA) showed much stronger thermostability at 50℃ than that expressed in Escherichia coli (EcAorCsxA), which may be related to glycosylation. AorCsxA activity was inhibited by EDTA and most of the tested metal ions. A single amino acid mutation (F769W) in AorCsxA significantly enhanced the specific activity and hydrolysis velocity as revealed by comparison of Vmax and kcat values with those of the wild-type enzyme. The three-dimensional structure suggested the tightened pocket at the active site of F769W enabled efficient substrate binding. The AorCsxA gene was heterologously expressed in P. pastoris, and one transformant was found to produce 222 U/ml activity during the high-cell-density fermentation. This AorCsxA-overexpressing P. pastoris strain is feasible for large-scale production of AorCsxA.

Identification of Factors Regulating Escherichia coli 2,3-Butanediol Production by Continuous Culture and Metabolic Flux Analysis

  • Lu, Mingshou;Lee, Soo-Jin;Kim, Bo-Rim;Park, Chang-Hun;Oh, Min-Kyu;Park, Kyung-Moon;Lee, Sang-Yup;Lee, Jin-Won
    • Journal of Microbiology and Biotechnology
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    • 제22권5호
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    • pp.659-667
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    • 2012
  • 2,3-Butanediol (2,3-BDO) is an organic compound with a wide range of industrial applications. Although Escherichia coli is often used for the production of organic compounds, the wild-type E. coli does not contain two essential genes in the 2,3-BDO biosynthesis pathway, and cannot ferment 2,3-BDO. Therefore, a 2,3-BDO biosynthesis mutant strain of Escherichia coli was constructed and cultured. To determine the optimum culture factors for 2,3-BDO production, experiments were conducted under different culture environments ranging from strongly acidic to neutral pH. The extracellular metabolite profiles were obtained using high-performance liquid chromatography (HPLC), and the intracellular metabolite profiles were analyzed by ultra-performance liquid chromatography and quadruple time-of-flight mass spectrometry (UPLC/Q-TOF-MS). Metabolic flux analysis (MFA) was used to integrate these profiles. The metabolite profiles showed that 2,3-BDO production favors an acidic environment (pH 5), whereas cell mass favors a neutral environment. Furthermore, when the pH of the culture fell below 5, both the cell growth and 2,3-BDO production were inhibited.

Aspergillus nidulans에 있어서 uvsH 유전자가 mitotic recombination에 미치는 영향 (The Effects of uvsH Gene in Aspergillus nidulans on Mitotic Recombination Behabiour)

  • 채순기;한동민;강현삼
    • 미생물학회지
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    • 제24권3호
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    • pp.221-227
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    • 1986
  • Aspergillus nidulans에서, UV나 4- NQO에 의한 돌연변이 유발에 있어 성내적으로 핑요한 uvsH돌연변이를 가 지고 있는 변이주를 이용하여 mitotic recombination 현상을 조사하였다. 비록 uvsH locus는 {pB 37과 centromere 사이에서의 자말적인 mitotic crossing over에는 영향플 주지 않았지만 uvsH/uvsH동형이애체에서 UV에 의한 Int te rgenic recombination은 얻어나지 않았다. 또한 서로 상보적이 아닌 riboA 1과 ribo A3 유전핵적 단시에서의 riboflavin에 대한 gene converSlOn에 있어셔 u uvsH 돌연변이는 자말석이든 LV보 유멜시켰던 이 과정에 관여하고 있지 않있다. 비록 정상석인 성 장에서는 거으1 차이가 없였지만, 세포들을 UV로 조사하였을 때 야생주에 비해 uvsH동형 이배체에서의 aneuploid발생이 높은 빈도로 나타났다.

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고도에 따른 지역별 복숭아혹진딧물 집단 변이 마커 개발 (Development of Variation Marker of Myzus persicae by Altitude)

  • 김주일;권민
    • 한국응용곤충학회지
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    • 제50권4호
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    • pp.325-333
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    • 2011
  • 기후변화에 따른 고도별 곤충의 유전 변이를 분석하고자 배추에서 복숭아혹진딧물(Myzus persicae)을 지표해충으로 변이 분석이 가능한 마커를 개발하고자 하였다. 즉, 지역의 기후가 변하면 유전자가 변동할 것이라는 가설 하에 실내에서 누대 사육된 계통을 비교집단으로 가정하고 횡성, 평창과 강릉 지역에서 고도별 5개 지역(157 m, 296 m, 560 m, 756 m, 932 m)에서 채집된 지역 집단간의 변이를 찾고자 하였다. 생태적 변이는 모든 집단에서 찾을 수가 없었고, 에스터레이즈 동위효소 분석 및 inter-simple sequence repeat (ISSR) PCR 결과에서 실내 사육 계통과 지역 집단간의 차이는 보였으나 지역 집단간의 큰 차이는 찾을 수가 없었다. 그러나 rRNA와 mtCO I 부분 염기서열을 분석하여 5개의 지역집단 내에서 internal transcribed spacer-2 (ITS-2) 와 mtCO I에 각각 한 개씩의 단일염기다형성(SNP)를 발견하였다. 이 SNP는 유전 변동 추적이 가능한 매우 유용한 마커로 사용 될 수 있다.

Effects of Korean ginseng berry on skin antipigmentation and antiaging via FoxO3a activation

  • Kim, Juewon;Cho, Si Young;Kim, Su Hwan;Cho, Donghyun;Kim, Sunmi;Park, Chan-Woong;Shimizu, Takahiko;Cho, Jae Youl;Seo, Dae Bang;Shin, Song Seok
    • Journal of Ginseng Research
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    • 제41권3호
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    • pp.277-283
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    • 2017
  • Background: The ginseng berry has various bioactivities, including antidiabetic, anticancer, antiinflammatory, and antioxidative properties. Moreover, we have revealed that the active antiaging component of the ginseng berry, syringaresinol, has the ability to stimulate longevity via gene activation. Despite the many known beneficial effects of ginseng, its effects on skin aging are poorly understood. In this study, we investigated the effects of ginseng and the ginseng berry on one of the skin aging processes, melanogenesis, and age-related pigment lipofuscin accumulation, to elucidate the mechanism of action with respect to antiaging. Methods: The human melanoma MNT1 cell line was treated with ginseng root extract, ginseng berry extract, or syringaresinol. Then, the cells were analyzed using a melanin assay, and the tyrosinase activity was estimated. The Caenorhabditis elegans wild type N2 strain was used for the life span assay to analyze the antiaging effects of the samples. A lipofuscin fluorescence assay was performed during 10 passages with the syringaresinol treatment. Results: A 7-d treatment with ginseng berry extract reduced melanin accumulation and tyrosinase activity more than ginseng root extract. These results may be due to the active compound of the ginseng berry, syringaresinol. The antimelanogenic activity was strongly coordinated with the activation of the longevity gene foxo3a. Moreover, the ginseng berry extract had more potent antiaging effects, caused a life span extension, and reduced lipofuscin accumulation. Conclusion: Taken together, our results suggest that these antimelanogenic effects and antiaging effects of ginseng berry mediate the activation of antioxidation-FoxO3a signaling.