• Title/Summary/Keyword: Visualization for Quantitative Data

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Visualization and Image Processing for Measurement of Propagational Velocity of Shear Front (유동장의 이동속도측정을 위한 가시화 및 영상처리 방안)

  • Kim Jae-Won;Han Sang-Hoon;Ahn Eun-Young
    • Journal of Korea Multimedia Society
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    • v.8 no.10
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    • pp.1322-1328
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    • 2005
  • The circulation flows passing through the Ekman boundary layer on the rotating disk and transfer the angular momentum into the interior region of the container. Consequently, the circulation enhances the momentum transfer and the interior fluid is divided by a propagating shear front. This investigation focuses on computer vision and image processing technique for analysis of Non-Newtonian Fluids. To visualize marching velocity shear front for the transient flow, a particular shaped particles and light are used. To validate the proposed method, quantitative image are compared with the optical data acquired by a direct measurement of LDV (Laser Doppler Velocimetry).

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Chlorophyll contents and expression profiles of photosynthesis-related genes in water-stressed banana plantlets

  • Sri Nanan Widiyanto;Syahril Sulaiman;Simon Duve;Erly Marwani;Husna Nugrahapraja;Diky Setya Diningrat
    • Journal of Plant Biotechnology
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    • v.50
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    • pp.127-136
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    • 2023
  • Water scarcity decreases the rate of photosynthesis and, consequently, the yield of banana plants (Musa spp). In this study, transcriptome analysis was performed to identify photosynthesis-related genes in banana plants and determine their expression profiles under water stress conditions. Banana plantlets were in vitro cultured on Murashige and Skoog agar medium with and without 10% polyethylene glycol and marked as BP10 and BK. Chlorophyll contents in the plant shoots were determined spectrophotometrically. Two cDNA libraries generated from BK and BP10 plantlets, respectively, were used as the reference for transcriptome data. Gene ontology (GO) enrichment analysis was performed using the Database for Annotation, Visualization, and Integrated Discovery (DAVID) and visualized using the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway prediction. Morphological observations indicated that water deficiency caused chlorosis and reduced the shoot chlorophyll content of banana plantlets. GO enrichment identified 52 photosynthesis-related genes that were affected by water stress. KEGG visualization revealed the pathways related to the 52 photosynthesisr-elated genes and their allocations in four GO terms. Four, 12, 15, and 21 genes were related to chlorophyll biosynthesis, the Calvin cycle, the photosynthetic electron transfer chain, and the light-harvesting complex, respectively. Differentially expressed gene (DEG) analysis using DESeq revealed that 45 genes were down-regulated, whereas seven genes were up-regulated. Four of the down-regulated genes were responsible for chlorophyll biosynthesis and appeared to cause the decrease in the banana leaf chlorophyll content. Among the annotated DEGs, MaPNDO, MaPSAL, and MaFEDA were selected and validated using quantitative real-time PCR.

A Study on the Flow Characteristics around Underwater Triangular Structure (삼각형상 수중구조물 주위의 유동특성에 관한 연구)

  • Han, Won-Hui;Cho, Dae-Hwan
    • Journal of the Korean Society of Marine Environment & Safety
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    • v.14 no.1
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    • pp.21-27
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    • 2008
  • Triangular structure is used as basic shape of artificial structures for generating the upwelling current in order to make rich fishing ground at sea. Artificial upwelling current could bring the deep sea water containing a lot of nutrients from the bottom up to the surface. The purpose of this study is to examine the flow characteristics around underwater triangular structure with various stratification parameter. An experimental study was carried out for the triangular structure model in the circulating water channel to investigate flow characteristics by flow visualization method. A velocity fields around the underwater structure were measured by particle image velocimetry(PIV). The experimental results showed that the upwelling effect at the back and upper region of the structure could be best when the water depth was 2 times of the structure height and the stratification parameter was approximately 3.0. These quantitative data will be useful to determine the functional efficiency cf artificial upwelling structures.

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Development of Flash Boiling Spray Prediction Model of Multi-hole GDI Injector Using Machine Learning (머신러닝을 이용한 다공형 GDI 인젝터의 플래시 보일링 분무 예측 모델 개발)

  • Chang, Mengzhao;Shin, Dalho;Pham, Quangkhai;Park, Suhan
    • Journal of ILASS-Korea
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    • v.27 no.2
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    • pp.57-65
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    • 2022
  • The purpose of this study is to use machine learning to build a model capable of predicting the flash boiling spray characteristics. In this study, the flash boiling spray was visualized using Shadowgraph visualization technology, and then the spray image was processed with MATLAB to obtain quantitative data of spray characteristics. The experimental conditions were used as input, and the spray characteristics were used as output to train the machine learning model. For the machine learning model, the XGB (extreme gradient boosting) algorithm was used. Finally, the performance of machine learning model was evaluated using R2 and RMSE (root mean square error). In order to have enough data to train the machine learning model, this study used 12 injectors with different design parameters, and set various fuel temperatures and ambient pressures, resulting in about 12,000 data. By comparing the performance of the model with different amounts of training data, it was found that the number of training data must reach at least 7,000 before the model can show optimal performance. The model showed different prediction performances for different spray characteristics. Compared with the upstream spray angle and the downstream spray angle, the model had the best prediction performance for the spray tip penetration. In addition, the prediction performance of the model showed a relatively poor trend in the initial stage of injection and the final stage of injection. The model performance is expired to be further enhanced by optimizing the hyper-parameters input into the model.

Quantitative analysis using decreasing amounts of genomic DNA to assess the performance of the oligo CGH microarray

  • Song Sunny;Lazar Vladimir;Witte Anniek De;Ilsley Diane
    • Proceedings of the Korean Society for Bioinformatics Conference
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    • 2006.02a
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    • pp.71-76
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    • 2006
  • Comparative genomic hybridization (CGH) is a technique for studying chromosomal changes in cancer. As cancerous cells multiply, they can undergo dramatic chromosomal changes, including chromosome loss, duplication, and the translocation of DNA from one chromosome to another. Chromosome aberrations have previously been detected using optical imaging of whole chromosomes, a technique with limited sensitivity, resolution, quantification, and throughput. Efforts in recent years to use microarrays to overcome these limitations have been hampered by inadequate sensitivity, specificity and flexibility of the microarray systems. The oligonucleotide CGH microarray system overcomes several scientific hurdles that have impeded comparative genomic studies of cancer. This new system can reliably detect single copy deletions in chromosomes. The system includes a whole human genome microarray, reagents for sample preparation, an optimized microarray processing protocol, and software for data analysis and visualization. In this study, we determined the sensitivity, accuracy and reproducibility of the new system. Using this assay, we find that the performance of the complete system was maintained over a range of input genomic DNA from 5 ug down to 0.15 ug.

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The utility of three-dimensional models in complex microsurgical reconstruction

  • Ogunleye, Adeyemi A.;Deptula, Peter L.;Inchauste, Suzie M.;Zelones, Justin T.;Walters, Shannon;Gifford, Kyle;LeCastillo, Chris;Napel, Sandy;Fleischmann, Dominik;Nguyen, Dung H.
    • Archives of Plastic Surgery
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    • v.47 no.5
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    • pp.428-434
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    • 2020
  • Background Three-dimensional (3D) model printing improves visualization of anatomical structures in space compared to two-dimensional (2D) data and creates an exact model of the surgical site that can be used for reference during surgery. There is limited evidence on the effects of using 3D models in microsurgical reconstruction on improving clinical outcomes. Methods A retrospective review of patients undergoing reconstructive breast microsurgery procedures from 2017 to 2019 who received computed tomography angiography (CTA) scans only or with 3D models for preoperative surgical planning were performed. Preoperative decision-making to undergo a deep inferior epigastric perforator (DIEP) versus muscle-sparing transverse rectus abdominis myocutaneous (MS-TRAM) flap, as well as whether the decision changed during flap harvest and postoperative complications were tracked based on the preoperative imaging used. In addition, we describe three example cases showing direct application of 3D mold as an accurate model to guide intraoperative dissection in complex microsurgical reconstruction. Results Fifty-eight abdominal-based breast free-flaps performed using conventional CTA were compared with a matched cohort of 58 breast free-flaps performed with 3D model print. There was no flap loss in either group. There was a significant reduction in flap harvest time with use of 3D model (CTA vs. 3D, 117.7±14.2 minutes vs. 109.8±11.6 minutes; P=0.001). In addition, there was no change in preoperative decision on type of flap harvested in all cases in 3D print group (0%), compared with 24.1% change in conventional CTA group. Conclusions Use of 3D print model improves accuracy of preoperative planning and reduces flap harvest time with similar postoperative complications in complex microsurgical reconstruction.

OLAP4R: A Top-K Recommendation System for OLAP Sessions

  • Yuan, Youwei;Chen, Weixin;Han, Guangjie;Jia, Gangyong
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.11 no.6
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    • pp.2963-2978
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    • 2017
  • The Top-K query is currently played a key role in a wide range of road network, decision making and quantitative financial research. In this paper, a Top-K recommendation algorithm is proposed to solve the cold-start problem and a tag generating method is put forward to enhance the semantic understanding of the OLAP session. In addition, a recommendation system for OLAP sessions called "OLAP4R" is designed using collaborative filtering technique aiming at guiding the user to find the ultimate goals by interactive queries. OLAP4R utilizes a mixed system architecture consisting of multiple functional modules, which have a high extension capability to support additional functions. This system structure allows the user to configure multi-dimensional hierarchies and desirable measures to analyze the specific requirement and gives recommendations with forthright responses. Experimental results show that our method has raised 20% recall of the recommendations comparing the traditional collaborative filtering and a visualization tag of the recommended sessions will be provided with modified changes for the user to understand.

A Method for the Extraction of a Subset of Points from a Large Set of Points Affecting the Distribution of Surface Data - A Case Study of Market Area and Competitive Power Analysis by Sales Data of Micro Scale Retail Stores - (평면 데이터 분포에 영향을 끼치는 점 분포의 부분집합 추출 방법 - 소규모 소매점포의 매출자료를 이용한 상권 및 경쟁력 분석기법을 사례로 -)

  • Lee, Jung-Eun;Sadahiro, Yukio
    • Journal of the Korean Association of Geographic Information Studies
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    • v.9 no.1
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    • pp.1-12
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    • 2006
  • Approaches to spatial analysis differ from the type of spatial objects to be treated. Especially, in here, the case where two spatial data sets coexist is considered. The goal of such case lies on detecting a subset of spatial objects out of a large set that affects the distribution of the other object. However, it is not easy to extract a subset from a large set by visualization just with the help of GIS since huge amount of data are provided nowadays. In this research, therefore, relationship between two different spatial data are analyzed by quantitative measure in the case study of marketing geography. A purchase history data of a small retail store and the location of its competitors are given as source data for the analysis. The goal of analysis from the aspect of this case study is to extract strong competitors of the store that affects the sales amount of the store among many competitors. With the result, therefore, it is expected that market area pattern and competitive power of stores under micro scale retail environment would be understood by quantitative measure.

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Micro-computed tomography for assessing the internal and external voids of bulk-fill composite restorations: A technical report

  • Tosco, Vincenzo;Monterubbianesi, Riccardo;Furlani, Michele;Giuliani, Alessandra;Putignano, Angelo;Orsini, Giovanna
    • Imaging Science in Dentistry
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    • v.52 no.3
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    • pp.303-308
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    • 2022
  • Purpose: This technical report aims to describe and detail the use of micro-computed tomography for a reliable evaluation of the bulk-fill composite/tooth interface. Materials and Methods: Bulk-fill composite restorations in tooth cavities were scanned using micro-computed tomography to obtain qualitatively and quantitatively valuable information. Two-dimensional information was processed using specific algorithms, and ultimately a 3-dimensional (3D) specimen reconstruction was generated. The 3D rendering allowed the visualization of voids inside bulk-fill composite materials and provided quantitative measurements. The 3D analysis software VG Studio MAX was used to perform image analysis and assess gap formation within the tooth-restoration interface. In particular, to evaluate internal adaptation, the Defect Analysis addon module of VG Studio Max was used. Results: The data, obtained with the processing software, highlighted the presence and the shape of gaps in different colours, representing the volume of porosity within a chromatic scale in which each colour quantitatively represents a well-defined volume. Conclusion: Micro-computed tomography makes it possible to obtain several quantitative parameters, providing fundamental information on defect shape and complexity. However, this technique has the limit of not discriminating materials without radiopacity and with low or no filler content, such as dental adhesives, and hence, they are difficult to visualise through software reconstruction.

A Study on the Visualization and Characteristics of Mixed Convection between Inclined Parallel Plates Filled with High Viscous Fluid (경사진 평행평판 내 고 점성유체의 혼합대류 열전달 특성 및 가시화에 관한 연구)

  • Piao, Ri-Long;Bae, Dae-Seok
    • Korean Journal of Air-Conditioning and Refrigeration Engineering
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    • v.18 no.9
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    • pp.698-706
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    • 2006
  • Experiment and numerical calculation have been peformed to investigate mixed convection heat transfer between inclined parallel plates. Particle image velocimetry (PIV) with thermo-sensitive liquid crystal (TLC) tracers is used for visualizing and analysis. This method allows simultaneous measurement of velocity and temperature fields at a given instant of time. Quantitative data of the temperature and velocity are obtained by applying the color-image processing to a visualized image, and neural network is applied to the color-to-temperature calibration. The governing equations are discretized using the finite volume method. The results are presented for the Reynolds number ranges from 0.004 to 0.062, the angle of inclination, ${\Theta}$, from 0 to 45 degree and Prandtl number of the high viscosity fluid is 909. The results show velocity, temperature and mean Nusselt numbers distributions. It is found that the periodic flow of mixed convection between inclined parallel plates is shown at $0^{\circ}{\leq}{\Theta}<30^{\circ}$, Re<0.062, and the flow pattern can be classified into three patterns which depend on Reynolds number and the angle of inclination. The minimum Nusselt numbers occur at Re=0.05 regardless of the angle of inclination.