• Title/Summary/Keyword: Specific population

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Genetic Distances Within-Population and Between-Population of Tonguesole, Cynoglossus spp. Identified by PCR Technique

  • Yoon, Jong-Man
    • Development and Reproduction
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    • v.23 no.3
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    • pp.297-304
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    • 2019
  • The higher fragment sizes (>2,100 bp) are not observed in the two C. spp. populations. The six oligonucleotides primers OPA-11, OPB-09, OPB-14, OPB-20, OPC-14, and OPC-18 were used to generate the unique shared loci to each tonguesole population and shared loci by the two tonguesole populations. The hierarchical polar dendrogram indicates two main clusters: Gunsan (GUNSAN 01-GUNSAN 11) and the Atlantic (ATLANTIC 12-ATLANTIC 22) from two geographic populations of tonguesoles. The shortest genetic distance displaying significant molecular difference was between individuals' GUNSAN no. 02-GUNSAN no. 01 (genetic distance=0.038). In the long run, individual no. 02 of the ATLANTIC tonguesole was most distantly related to GUNSAN no. 06 (genetic distance=0.958). These results demonstrate that the Gunsan tonguesole population is genetically different from the Atlantic tonguesole population. The potential of PCR analysis to identify diagnostic markers for the identification of two tonguesole populations has been demonstrated. As a rule, using various oligonucleotides primers, this PCR method has been applied to identify polymorphic/specific markers particular to species and geographical population, as well as genetic diversity/polymorphism in diverse species of organisms.

Trend of health care utilization of cleft lip and/or palate in Korea during 2007-2016

  • Hong, Mihee;Baek, Seung-Hak
    • The korean journal of orthodontics
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    • v.48 no.4
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    • pp.216-223
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    • 2018
  • Objective: This study is performed to investigate the trend of health care (HC) utilization among cleft lip and/or palate (CL/P) during 2007-2016 by using data from the Korean National Health Insurance Service (KNHIS). Methods: The KNHIS data were reorganized to count a specific patient only once for a specific year. Cleft type (cleft lip [CL], cleft palate [CP], and cleft lip and palate [CLP]), sex, and age at HC utilization were investigated. The study period was divided into the first half (2007-2011) and the last half (2012-2016). The utilization number and rate per 1,000 population were calculated for the total population and for new-born patients. Independent t-test and one-way analysis of variance were used for statistical analyses. Results: The total CL/P population (n = 48,707) comprised 19.2% CLP, 35.5% CL, and 45.3% CP (CLP < CL < CP; p < 0.001). Their HC utilization rate increased from 0.066 in 2007 to 0.118 in 2016. The new-born patient population (n = 7,617) comprised 18.6% CLP, 30.4% CL, and 51.0% CP (CLP < CL < CP; p < 0.001). Their HC utilization rate increased from 1.12 in 2007 to 1.74 in 2016. An examination of the utilization number and rate among new-born patients revealed CP exhibited a female-dominant pattern (all p < 0.01), while CL and CLP exhibited a male-dominant pattern (all p < 0.01). However, utilization number showed no difference by sex and cleft type between 2007-2011 and 2012-2016. Conclusions: These results might serve as a guideline for HC utilization among patients with CL/P.

Development of a Specific antibody for the Detection of Ice Nucleation-Active Bacteria (빙핵세균의 검출을 위한 특이적 항혈청 개발)

  • Lee, Ung;Kwon, Mi-Kyung;Seong, Ki-Young;Cho, Baik-Ho;Kim, Ki-Chung
    • Plant Disease and Agriculture
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    • v.5 no.1
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    • pp.27-33
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    • 1999
  • Frost injury of crops is closely related to the epiphytic population dynamics of ice nucleation-active (INA) bacteria, and the injury can be reduced by decreasing the INA bacterial population. In order to predict the epiphytic population of INA bacteria on crops, a rapid and accurate detection method has to be developed. In the previous report, we produced some antibodies against INA proteins purified from the outer membrane of INA bacteria. However it was difficult to produce the antibodies because the purification procedures of the INA proteins were complicated, and the final yield was too low. We designed a specific peptide from the N-terminal region of INA protein by computer analysis and synthesized the peptide in vitro in this experiment. The peptide sequence was Asp-Ser-Por-Leu-Ser-Leu-His-Ala-Asp, that is corresponding to the highly conserved region in several INA proteins, with predicted beta turn, coiling, and hydrophilic region. A polyclonal anti-INA peptide antiserum produced specifically recognized INA bacteria as few as 10 colony-forming units (CFU) in the ELISA reactions and did not respond to other non-INA bacteria. Serological specificity of the anti-INA peptide antiserum will facilitate the forecasting of the INA bacterial population dynamics on crops.

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Genetic Differences and Variation of Ascidians, Halocynthia roretzi von Drasche and H. hilgendorfi Oka Identified by PCR Analysis

  • Yoon, Jong-Man;Kim, Jong-Yeon
    • Development and Reproduction
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    • v.15 no.4
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    • pp.359-364
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    • 2011
  • The seven selected primers OPA-02, OPA-04, OPA-18, OPD-07, OPD-08, OPD-15 and OPD-16 were used to generate unique shared loci to each species and shared loci by the two species. The hierarchical dendrogram indicates three main branches: cluster 1 (RORETZI 01~RORETZI 11) and cluster 2 (HILGENDORF 12~HILGENDORF 22) from two geographic populations of ascidians, Halocynthia roretzi and H. hilgendorfi. The shortest genetic distance displaying significant molecular difference was between individuals' HILGENDORF no. 14~HILGENDORF no. 19 (genetic distance =0.008). Ultimately, individual no. 02 of the RORETZI ascidian was most distantly related to HILGENDORF no. 21 (genetic distance=0.781). These results demonstrate that the H. roretzi population is genetically different from the H. hilgendorfi population. From what has been said above, the potential of PCR analysis to identify diagnostic markers for the identification of two ascidian populations has been demonstrated. Generally speaking, using a variety of decamer primers, this PCR method has been applied to identify specific markers particular to line, species and geographical population, as well as genetic diversity/polymorphism in diverse species of organisms.

The study on the $CO_2$ fixation and algae reproduction by microalgae Chlorella ellipsoidea (Chlorella ellipsoidea를 이용한 $CO_2$ 고정 및 미세조류 증식효과 검토)

  • 강창민;홍순강
    • Journal of environmental and Sanitary engineering
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    • v.15 no.1
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    • pp.39-45
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    • 2000
  • The purpose of this study was conducted to indentified the fixing quality of $CO_2$, the most important greenhouse effect gas, by microalgae Chlorella ellipsoidea in batch test apparatus. The glass flask of $1.4{\ell}$ culture media which was saturated with 99.99% pure $CO_2$ gas was setted water bath of $25^{\circ}C$, 5000Lux, and seeded 100$m\ell$ algae liquid. We checked the change of inorganic carbon concentration and algae population with time in culture media. The result were next: the growth of algae population relied on aquatic IC(inorganic carbon) concentration. And the pH was increased with decrease of IC concentration. The growth of algae population had positive correalation with $CO_2$ concentration, and the coefficient of correlation was 0.982. The specific growth rate($\mu$) of Chlorella ellipsoidea was 1.104/d, the maximum specific growth $rate({\mu}_{max}$) of 9.21/d, and helf velocity constant($K_s$) of $259mg/{\ell}$ by Monod equation.

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The Outline of Han River Basin Environmental master Plan Project (한강유역 환경보전 종합계획 사업의 개요)

  • 이선환
    • Journal of the Korean Professional Engineers Association
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    • v.15 no.1
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    • pp.46-50
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    • 1982
  • Following rapid industrial development and urbanization in Korea, there is a need for the Government to implement effective control of pollution and to undertake specific schemes in areas where pollution of the environment is severe. In response to this need, Government of Korea prepare Han River Basin Environmental Master Plan Project for water, air, solid waste to cover environmental protection of the Han River Basin. The Project area is approximately 27,000 sq. Km extending over Seoul, Kyunggi, Kwangwon, Chungbuk Province. The total population of Master Plan Project area is approximately 11.6 million, or one-third of the total population of Korea. There are about 8,000 industries, including those located in 16 industrial complexes, in the project area. The scope of work and terms of reference are the following: (1) A Summary of existing land use and forecasts for changes in land use by the year 2,000. (2) Emission inventories for air, waste water, and solid wastes. (3) Forecasts of future population growth patterns and pollution loadings. (4) Identification of specific projects needs to reduce pollution levels and satisfy the environmental quality standards. (5) A Program of enforcement to include (i) self monitoring, and (ii) governmental inspections and surveillance. (6) A program for quality improvement and quality assurance of environmental measurements. (7) Reports summarizing all data collected analyzed during the study. (8) Conceptual design and feasibility studies, including cost estimates, for needed pollution control projects. (9) A financial plan for future detailed design and construction of public facilities, for financial incentives to industry, and for user charges for industrial use of public treatment of disposal works.

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Characterization of Single Nucleotide Polymorphisms in 55 Disease-Associated Genes in a Korean Population

  • Lee, Seung-Ku;Kim, Hyoun-Geun;Kang, Jason-J.;Oh, Won-Il;Oh, Berm-Seok;Kwack, Kyu-Bum
    • Genomics & Informatics
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    • v.5 no.4
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    • pp.152-160
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    • 2007
  • Most common diseases are caused by multiple genetic and environmental factors. Among the genetic factors, single nucleotide polymorphisms (SNPs) are common DNA sequence variations in individuals and can serve as important genetic markers. Recently, investigations of gene-based and whole genome-based SNPs have been applied to association studies for marker discovery. However, SNPs are so population-specific that the association needs to be verified. Fifty-five genes and 384 SNPs were selected based on association with disease. Genotypes of 337 SNPs in candidate genes were determined using Illumina Sentrix Array Matrix (SAM) chips by an allele-specific extension method in 364 unrelated Korean individuals. Allelic frequencies of SNPs were compared with those of other populations obtained from the International HapMap database. Minor allele frequencies, linkage disequilibrium blocks, tagSNPs, and haplotypes of functional candidate SNPs in 55 genetic disease-associated genes were provided. Our data may provide useful information for the selection of genetic markers for gene-based genetic disease-association studies of the Korean population.

Effect of Rubus coreanus Miquel on the Specific Immune Response in Mice (복분자가 생쥐의 특이적 면역반응에 미치는 영향)

  • Won Kyung Sook;Lee Tae Won;Eun Jae Soon;Song Jung Mo
    • Journal of Physiology & Pathology in Korean Medicine
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    • v.17 no.3
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    • pp.656-661
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    • 2003
  • The specific immune response of unripened fruits and ripened fruits of Rubus coreanus Miquel was examined in BALB/C mice. The 70% ethyl alcohol extracts (20 or 100 mg/kg) of unripened fruits (RCE-I) and of ripened fruits (RCE-II) were administered p.o. once a day for 7 days. RCE-I and RCE-II decreased the viability of thymocytes, but increased the viability of splenocytes. Also, RCE-I enhanced the population of helper T and cytotoxic T cells in thymocytes and RCE-II enhanced the population of helper T cells. Furthermore, RCE-I and RCE-II decreased the population of B220/sup +/ cells and Thy1/sup +/ cells and helper T cells in splenocytes. In a general way, the immunosuppressive action of RCE-I was more potent than those of RCE-II. These results suggest that RCE-I and RCE-II have a regulative action of immune response via decrease the viability of thymocytes and increase the viability of splenocytes.

Analysis of the Distinguishing Characteristics of Small Towns in Korea (소도읍의 유형별 내부기능 특성 분석)

  • Yuh, Hong-Koo;Ji, Nam-Seok;Kim, Jin-Young
    • Journal of Korean Society of Rural Planning
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    • v.13 no.4
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    • pp.9-22
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    • 2007
  • With the establishment of municipalities, public interest in small towns in Korea has been on the rise. To initiate an effective study and suggest subsequent policies for small towns, it is necessary to analyze and discuss substantive issues based on specific conditions of these small towns. The primary objective of this paper is to categorize small towns into types and to analyze the peculiarities and differences of their internal factors. The focus of this research is to determine the general characteristics of the classified towns and to suggest specific revitalization and specialized studies about them. In the main analysis of this paper, 39 small towns are divided into sets according to urban rank, conditions of location, and size of the population in the central site. Furthermore, distinctions of the divided towns are analyzed using three constituents for urban organization, including populations, activities, and facilities/land. From the research results, it was determined that there is a difference between small town types, according to population, land cost, and urban activities, based upon the urban rank and size of the population in the central site. Therefore, this paper concludes it is necessary to conduct further studies on time series analysis regarding the peculiarity changes of the types, and to complement the variables for future related studies.

Evolutionary and Functional Analysis of Korean Native Pig Using Single Nucleotide Polymorphisms

  • Lee, Jongin;Park, Nayoung;Lee, Daehwan;Kim, Jaebum
    • Molecules and Cells
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    • v.43 no.8
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    • pp.728-738
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    • 2020
  • Time and cost-effective production of next-generation sequencing data has enabled the performance of population-scale comparative and evolutionary studies for various species, which are essential for obtaining the comprehensive insight into molecular mechanisms underlying species- or breed-specific traits. In this study, the evolutionary and functional analysis of Korean native pig (KNP) was performed using single nucleotide polymorphism (SNP) data by comparative and population genomic approaches with six different mammalian species and five pig breeds. We examined the evolutionary history of KNP SNPs, and the specific genes of KNP based on the uniqueness of non-synonymous SNPs among the used species and pig breeds. We discovered the evolutionary trajectory of KNP SNPs within the used mammalian species as well as pig breeds. We also found olfaction-associated functions that have been characterized and diversified during evolution, and quantitative trait loci associated with the unique traits of KNP. Our study provides new insight into the evolution of KNP and serves as a good example for a better understanding of domestic animals in terms of evolution and domestication using the combined approaches of comparative and population genomics.