• 제목/요약/키워드: Species affinity

검색결과 161건 처리시간 0.035초

생물학적 자극 통제 수단으로 활용하기 위한 돼지 페로몬성 냄새 물질의 탐색: III. 2-(Cyclohexyloxy) Tetrahydrofurane 유도체와 Porcine Odorant Binding Protein 사이의 결합 친화력에 관한 비교 분자장 분석 (The Search of Pig Pheromonal Odorants for Biostimulation Control System Technologies: III. Comparative Molecular Field Analysis (CoMFA) on Binding Affinities between Ligands of 2-(Cyclohexyloxy) Tetrahydrofurane Derivatives and Porcine Odorant Binding Protein)

  • 성낙도;박창식;정훈성;성민규
    • Reproductive and Developmental Biology
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    • 제30권1호
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    • pp.13-19
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    • 2006
  • 생물학적 자극통제 수단으로 활용하기 위한 돼지 웅성 페르몬성 분자를 탐색하고자 일련의 냄새 분자로서 2-(cyclo-hexyloxy) tetrahydrofurane 유도체들의 정량적인 구조와 수용체인 porcine odorant binding protein (pOBP)간의 결합 친화력 상수$(p(Od)_{50})$에 대한 비교 분자장 분석(CoMFA)을 실행하였다. 가장 양호한 CoMFA 모델 AIV $(r^2_{cv}.(q^2)=0.886$$r^2_{ncv}.=0.984$)은 기질 분자 내 입체 중심(chiral center)의 절대 배열이 $C_1(R),C_2(S)$인 분자를 atom based fit 방법으로 배열하였을 경우의 standard field와 indicator field가 조합된 CoMFA장의 조건에서 유도되었다. 이 CoMFA 모델은 입체장 40.8% 정전기장 14.6%및 소수성장 44.6%가 결합 친화력 상수에 영향을 미치는 요소임을 나타내었다. 등고도의 분석 결과로부터 효과적인 결합 친화력 냄새 분자를 수식하는 데 몇 가지 가치 있는 정보를 얻을 수 있었다.

북부 가막만의 식물플랑크톤 군집 변동 해석 (Variation Analysis of Phytoplankton Communities in Northern Gamak Bay, Korea)

  • 오석진;박종식;윤양호;양한섭
    • 해양환경안전학회지
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    • 제15권4호
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    • pp.329-338
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    • 2009
  • 북부 가막만에서 해양환경의 변화에 따라 식물플랑크톤의 군집이 어떻게 변화하는지 기존에 발표된 식물플랑크톤 생리학적 자료를 이용하여 해석하였다. 해양환경 및 식물플랑크톤 조사는 2007년 11월부터 2008년 9월까지 2개 정점에서 관측하였다. 조사 동안 10%이상 점유율을 나타내는 우점종은 와편모조류 1종, 규조류 11종 등 총 12종이었다. 우점종의 출현 시기를 보면 규조류 Skeletonema costatum이 하계(7월과 8월)를 제외하고 우점하였으며, 특히 12월은 90% 이상의 매우 높은 우점율을 보였다. 그리고 나머지 기간은 규조류 Eucampia zodiacus와 Chaetoceros속이 우점하였다. 따라서 2008년 7월과 8월에 S. costatum이 우점하지 않는 이유를 생리학적 측면에서 살펴보면 1) S. costatum과 E. zodiacus는 모두 광온 광염성 종이지만, 하계의 수온에서는 E. zodiacus가 S. costatum보다 높은 성장속도를 보였고, 2) 7월에 낮은 부유물질의 농도는 높은 광량이 수중에 도달할 수 있어 E. zodiacus와 같이 광에 대한 친화성이 낮은 종도 우점할 수 있다. 또한 3) 인산염이 비교적 낮은 시기에는 성장전략을 보이는 S. costatum이, 높은 인산염 농도일 때 저장전략을 보이는 E. zodiacus종이 우점할 수 있기 때문으로 생각된다. 앞으로 더 구체적인 식물플랑크톤의 군집 변화를 알아보기 위해서는 계절별로 우점하는 대표 식물플랑크톤에 대한 생리실험이 필요할 것으로 보인다.

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통일을 대비한 북한의 초지개발 가능성과 전망 (Possibilitise and Prospects for Glassland Development Viewed in North Korea after Unification)

  • 윤익석;이인덕;이형석
    • 한국초지조사료학회지
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    • 제17권2호
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    • pp.93-100
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    • 1997
  • It is generally analyzed that the subject area of grassland development seen in the North Korea area following unification with the South Korea includes hillland, h o w upland, tideland, and other expected grassland development areas. Possibilities and prospects for grassland development become higher if such grassland is developed by methods of environmental affinity suitable to the geographical and environmental conditions of North korea. First, the grassland development has to be based on grass species which are both cold resistant and suitable to the climate and the soil conditions of North korea. In addition, research on adaptable species, mixture combination selections and grassland establishment methods should be performed along with the accumulation of domestic data. The kind of research can be conducted in such areas as Yenben in China(Yenben University), Taekwanryung and Taeback mountains, where geographical features are similar to those of North korea. This research is possible because research can easily be given access to these locations. Hence, it is desirable to prepare for the unification of the Korean peninsula by caning out basic and applied research, and by way of accumulating data in the relevant fields.

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Complexation of Co-contaminant Mixtures between Silver(I) and Polycyclic Aromatic Hydrocarbons

  • Yim, Soo-Bin
    • 한국환경과학회지
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    • 제12권8호
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    • pp.871-879
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    • 2003
  • The complexation of co-contaminant mixtures between Ag(I) and polycyclic aromatic hydrocarbon (PAH) molecules (naphthalene, pyrene, and perylene) were investigated to quantify the equilibrium constants of their complexes and elucidate the interactions between Ag(I) and PAH molecules. The apparent solubilities of PAHs in aqueous solutions increased with increasing Ag(I) ion concentration. The values, K$_1$ and K$_2$ of equilibrium constants of complexes of Ag(I)-PAHs, were 2.990 and 0.378, 3.615 and 1.261, and 4.034 and 1.255, for naphthalene, pyrene, and perylene, respectively, The K$_1$and K$_2$ values of PAHs for Ag(I) increased in the order of naphthalene < pyrene < perylene and naphthalene < pyrene ≒ perylene, respectively, indicating that a larger size of PAH molecule is likely to have more a richer concentration of electrons on the plane surfaces which can lead to stronger complexes with the Ag(I) ion. For the species of Ag(I)-PAH complexes, a 1:1 Ag(I) : the aromatic complex, AgAr$\^$+/, was found to be a predominant species over a 2:1 Ag(I) : aromatic complex, Ag$_2$Ar$\^$++/. The PAH molecules with four or more aromatic rings and/or bay regions were observed to have slightly less affinity with the Ag(I) ion than expected, which might result from inhibiting forces such as the spread of aromatic $\pi$ electrons over o wide molecular surface area and the intermolecular electronic repulsion in bay regions.

The Impact of Environmental and Host Specificity in Seed Germination and Survival of Korean Mistletoe [Viscum album var. coloratum (Kom.) Ohwi]

  • Lee, Bo Duck;Lee, Young Woo;Kim, Seong Min;Cheng, Hyo Cheng;Shim, Ie Sung
    • 한국자원식물학회지
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    • 제28권6호
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    • pp.710-717
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    • 2015
  • Humankind has been searching for medicinal materials from various plant sources in an attempt to treat disease. Mistletoe is one indubitable plant source for these materials due to its effectiveness in treating various diseases, but it has almost disappeared from the mountainous areas of Korea due to excessive harvesting. In this study, in order to select host tree species for Korean mistletoe [Viscum album var. coloratum (Kom.) Ohwi] by seed inoculation and to clarify the effect of host specificity among various tree species were conducted for the purpose of gaining basic information for the artificial cultivation of Korean mistletoe. Almost all the seeds of Korean mistletoe germinated in vitro at the temperature of 15℃. Among host trees used in this study, Prunus mume showed the highest parasitic affinity with inoculated Korean mistletoe, compared with any other host plants. However, treatment of hormones could not increase the low survival rate of Korean mistletoe on the host trees.

Analysis of Double Stranded DNA-dependent Activities of Deinococcus radiodurans RecA Protein

  • Kim, Jong-Il
    • Journal of Microbiology
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    • 제44권5호
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    • pp.508-514
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    • 2006
  • In this study, the double-stranded DNA-dependent activities of Deinococcus radiodurans RecA protein (Dr RecA) were characterized. The interactions of the Dr RecA protein with double-stranded DNA were determined, especially dsDNA-dependent ATP hydrolysis by the Dr RecA protein and the DNA strand exchange reaction, in which multiple branch points exist on a single RecA protein-DNA complex. A nucleotide cofactor (ATP or dATP ) was required for the Dr RecA protein binding to duplex DNA. In the presence of dATP, the nucleation step in the binding process occurred more rapidly than in the presence of ATP. Salts inhibited the binding of the Dr RecA protein to double-stranded DNA. Double-stranded DNA-dependent ATPase activities showed a different sensitivity to anion species. Glutamate had only a minimal effect on the double-stranded DNA-dependent ATPase activities, up to a concentration of 0.7 M. In the competition experiment for Dr RecA protein binding, the Dr RecA protein manifested a higher affinity to double-stranded DNA than was observed for single-stranded DNA.

入公山 義眞庵일대의 植生類型 (Vegetation Patterns of Yangjinam Area, Mt. Palgong)

  • Ri, Chong-Un;Jae-In Chun;Sang-Cheon Shin;Kyung-A Kang
    • The Korean Journal of Ecology
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    • 제16권3호
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    • pp.341-352
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    • 1993
  • To make clear the interspecific relation through competiton and affinities the forest vegetation of Yangjinam area, Mt. Palgong was analysed. By the calculation of ${\chi}^2-value$ based on the vegetation data collected from 125 quadrats of 12 sites, the component species of the study area were divided into 1 distinct group and 2 less distinct groups. In contrast, the analysis based on TWINSPAN and DECORANA showed that 4 group could be separated. These were Quercus monogolica-Pinus densiflora community, Quercus monogolica-Corylus sieboldiana community.

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Conformation and Linkage Studies of Specific Oligosaccharides Related to H1N1, H5N1, and Human Flu for Developing the Second Tamiflu

  • Yoo, Eunsun
    • Biomolecules & Therapeutics
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    • 제22권2호
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    • pp.93-99
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    • 2014
  • The interaction between viral HA (hemagglutinin) and oligosaccharide of the host plays an important role in the infection and transmission of avian and human flu viruses. Until now, this interaction has been classified by sialyl(${\alpha}2-3$) or sialyl(${\alpha}2-6$) linkage specificity of oligosaccharide moieties for avian or human virus, respectively. In the case of H5N1 and newly mutated flu viruses, classification based on the linkage type does not correlate with human infection and human-to-human transmission of these viruses. It is newly suggested that flu infection and transmission to humans require high affinity binding to the extended conformation with long length sialyl(${\alpha}2-6$)galactose containing oligosaccharides. On the other hand, the avian flu virus requires folded conformation with sialyl(${\alpha}2-3$) or short length sialyl(${\alpha}2-6$) containing trisaccharides. This suggests a potential future direction for the development of new species-specific antiviral drugs to prevent and treat pandemic flu.

Photografting of PET Fabrics with Vinyl Pyrrolidone and Acryloyl Morpholine Monomers

  • Huang, Weiwei;Jang, Jin-Ho
    • 한국염색가공학회지
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    • 제20권5호
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    • pp.28-34
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    • 2008
  • PET fabrics were photografted under continuous UV irradiation with vinyl pyrrolidone (VP) and acryloylmorpholine(ACMO) as monomers and benzophenone as a hydrogen-abstractable photoinitiator. ACMO can be grafted onto the PET fabrics more efficiently than VP. The grafted PET surfaces were characterized by ATR, ESCA, SEM and zeta potential measurement. ATR and ESCA analysis indicated significant alterations on chemical structure and atomic composition on the surface of the grafted fabrics, where nitrogen content increased with increasing grafting yield. SEM images showed that the fabric surface was covered with the grafted polymers. The zeta potentials and the water wettability of the grafted PET increased with grafting. Also the photografted fabrics showed an increased dyeablity to reactive dyes and increased affinity to various iodine species which imparted anti-bacterial properties.

Expression and Purification of Recombinant Superoxide Dismutase (PaSOD) from Psychromonas arctica in Escherichia coli

  • Na, Ju-Mee;Im, Ha-Na;Lee, Kyung-Hee
    • Bulletin of the Korean Chemical Society
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    • 제32권7호
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    • pp.2405-2409
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    • 2011
  • The psychrophilic bacteria Psychromonas arctica survives at subzero temperatures by having adapted several protective mechanisms against freezing and oxidative stresses. Many reactive oxygen species are likely generated in P. arctica as a result of reduced metabolic turnover rates. A previous study identified the pasod gene for superoxide dismutase from P. arctica using a series of PCR amplifications. Here, upon cloning into a His-tag fused plasmid, the sod gene from P. arctica (pasod) was successfully expressed by IPTG induction. His-tagged PaSOD was subsequently purified by $Ni^{2+}$-NTA affinity chromatography. The purified PaSOD exhibited a higher SOD activity than that of Escherichia coli (EcSOD) at all temperatures. The difference in activity between PaSOD and EcSOD becomes even more significant at 4$^{\circ}C$, indicating that PaSOD plays a functional role in the cold adaptation of P. arctica in the Arctic.