• Title/Summary/Keyword: Sp10

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Characterization of Cellulase and Xylanase from Bacillus subtilis NC1 Isolated from Environmental Soil and Determination of Its Genes (Bacillus subtilis NC1 유래 cellulase와 xylanase의 특성 규명 및 효소 유전자의 규명)

  • Park, Chang-Su;Kang, Dae-Ook;Choi, Nack-Shick
    • Journal of Life Science
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    • v.22 no.7
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    • pp.912-919
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    • 2012
  • A Bacillus sp. strain producing celluase and xylanase was isolated from environmental soil with LB agar plate containing carboxymethylcellulose (CM-cellulose) and beechwood xylan stained with trypan blue as substrates, respectively. Based on the 16S rRNA gene sequence and API 50 CHL test, the strain was identified as B. subtilis and named B. subtilis NC1. The cellulase and xylanase from B. subtilis NC1 exhibited the highest activities for CM-cellulose and beechwood xylan as substrate, respectively, and both enzymes showed the maximum activity at pH 5.0 and $50^{\circ}C$. We cloned and sequenced the genes for cellulase and xylanase from genomic DNA of the B. subtilis NC1 by the shot-gun cloning method. The cloned cellulase and xylanase genes consisted of a 1,500 bp open reading frame (ORF) encoding a 499 amino acid protein with a calculated molecular mass of 55,251 Da and a 1,269 bp ORF encoding a 422 amino acid protein with a calculated molecular mass of 47,423 Da, respectively. The deduced amino acid sequences from the genes of cellulase and xylanase showed high identity with glycosyl hydrolases family (GH) 5 and 30, respectively.

Analysis of Trans Fatty Acid and Crude Fat Contents of Bakery Foods in Chung-cheong Province (대전, 충천 지역 제빵류의 조지방 및 트랜스 지방산 함량 조사)

  • Kim, Yu-Mi;Heo, Oak-Sun;Lee, Ki-Teak
    • Journal of the East Asian Society of Dietary Life
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    • v.17 no.4
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    • pp.540-546
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    • 2007
  • Bakery food items distributed in Chung-cheong province Daejeon, Cheonan, and Cheongju) were studied to determine their contents of total crude fat and trans fatty acids (TFA). After fat extraction by the Folch method, methylation was carried out to analyze the fatty acid compositions by GC, using a SP-2560 column and flame ionization detector. The total fat contents of the foods were in the approximate range of 2$\sim$34%. The total fat contents of the items were as follows: whipping cream cake : 0.03$\sim$1.31 (g/100 g food), pastries = 0.21$\sim$2.64 (g/100 g food), cream puff = 0.09$\sim$0.43 (g/100 g food), croquette = 0.22$\sim$1.99 (g/100 g food), and glutinous rice doughnut = 0.03$\sim$0.38 (g/100 g food).

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Mobile LCD Characterization using XYZ Electro-Optical Transfer Functions for RGBCMYK Components (RGBCMYK 성분의 XYZ 전광 변환 함수를 이용한 모바일 LCD의 특성화)

  • Park, Kee-Hyon;Kwon, Oh-Seol;Son, Chang-Hwan;Ha, Yeong-Ho
    • Journal of the Institute of Electronics Engineers of Korea SP
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    • v.43 no.6 s.312
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    • pp.1-10
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    • 2006
  • Most display characterization methods, such as the gain-offset-gamma (GOG) model and S-curve model, generally assume that displays have two fundamental characteristics, channel -chromaticity-constancy and channel-independence. However, these assumptions are not so applicable in the case of liquid crystal (LC)-based mobile displays. Accordingly, modifications are required to enable the application of conventional display characterization methods to mobile displays. Therefore, this study proposes the modeling of distinct EOTFs in terms of the X, Y, and Z values for each channel to consider the differences among the EOTFs resulting from channel-chromaticity-inconstancy. In addition, to overcome the poor additivity property among the channels due to channel-interaction, the proposed method also models and uses the EOTFs of the X, Y, and Z values for the inter-channel components cyan, magenta, yellow, and gray Experimental results confirm that the mobile display color values predicted by the proposed characterization method are more accurate than those predicted by other characterization methods due to considering the channel-chromaticity-inconstancy and/or channel-dependence of the display.

Image Stabilization Algorithm for Close Watching UAV(Unmanned Aerial Vehicle) Aystem (근접감시용 무인항공기 시스템을 위한 영상 안정화 알고리즘)

  • Lee, Hong-Suk;Lee, Tae-Yeoung;Kim, Byoung-Soo;Ko, Yun-Ho
    • Journal of the Institute of Electronics Engineers of Korea SP
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    • v.47 no.6
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    • pp.10-18
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    • 2010
  • This paper proposes an image stabilization algorithm for close watching UAV(Unmanned Aerial Vehicle) using motion separation and stabilization mode. The motion of UAV is composed of its actual navigating motion and unwanted vibrating motion so that image sequences obtained from UAV are shaken randomly. In order to stabilize these images we separate the vibrating motion component from UAV motion and remove the effect caused by it from image sequences. In the proposed algorithm the motion and global intensity change of two consecutive images are modeled with 6 motion parameters and 2 intensity change parameters respectively. These modeled parameters are estimated by non-linear least square method based on Gauss-Newton algorithm. The vibrating motion component is separated from the estimated motion using IIR filtering and the geometric deformation caused by it is removed from image sequences. In order to apply the proposed method to real aerial image sequences with many abrupt changes of camera view, we proposed a stabilizing method using two different modes named as stabilizing and non-stabilizing mode. Experimental results show that the accuracy of motion estimation is 99% and the efficiency of removing the vibrating motion component is 90%. We apply the proposed method to real aerial image sequences and verified its stabilizing performance.

Expression of CDX2 and Villin in Gastric Cardiac Intestinal Metaplasia and the Relation with Gastric Cardiac Carcinogenesis

  • Xiao, Zhong-Yue;Ru, Yi;Sun, Jiang-Tao;Gao, She-Gan;Wang, Yu-Feng;Wang, Li-Dong;Feng, Xiao-Shan
    • Asian Pacific Journal of Cancer Prevention
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    • v.13 no.1
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    • pp.247-250
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    • 2012
  • Objective: To determine whether CDX2 and villin protein expression are associated with intestinal metaplasia (IM) in gastric cardiac mucosa and to explore the relationship with evolution of gastric cardiac adenocarcinoma (GCA). Methods: We studied 143 gastric cardiac biopsy or resection specimens from Henan province China, including 25 cardiac gastritis specimens with IM, 65 dysplasia specimens with IM and 35 gastric cardiac adenocarcinoma specimens and stained them for CDX2 and villin by the immunohistochemical SP method. 15 normal gastric cardiac biopsy specimens were also collected as control. Results: (1) Normal gastric mucosa presented no CDX2 and villin expression. The positive rates of CDX2 protein in cardiac gastritis with IM, dysplasia with IM, and carcinoma tissues were 84.0% (21/25), 66.7% (32/48) and 36.4% (20/55), respectively. While the positive rates of villin protein in cardiac gastritis with IM, dysplasia with IM, and carcinoma tissues were 76.0% (19/25), 70.8% (34/48) and 45.5% (25/55), respectively. There were significant differences among the three groups for both CDX2 and villin (P<0.01). Spearman's rank correlation coefficient(rho) showed a close correlation between the two proteins (r=0.843, P<0.01) and both were positively related with tumor differentiation (both P<0.05), but not associated with age, sex, invasion and metastasis of lymph node (P>0.05). Conclusion: Our results suggest that ectopic expression of CDX2 and villin may be involved in early-stage IM and tumorigenesis in gastric cardia and the expression of villin may be regulated by CDX2.

Effect of Mineral Nutrient Contents and Growth on the Damages of Organic Apple Trees (사과 유기재배 시 무기성분 함량과 수체생장과 피해에 미치는 영향)

  • Choi, Hyun-Sug;Jung, Seok-Kyu
    • Korean Journal of Organic Agriculture
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    • v.25 no.3
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    • pp.587-602
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    • 2017
  • Correlations of soil and leaf nutrients and growth of young 'Enterprise' apple (Malus ${\times}$ domestica Borkh.) trees were analyzed with tree damage, such as Japanese beetle (JB; Popillia japonica Newman)-damaged leaves, vole damage to trunk, tree mortality, and weed density in a certified organic orchard in warm and humid environment of Southern USA. Interaction treatments of four mulch and three fertilizers were applied around trees as follows: mow-and-blow (MB), shredded paper (SP), wood chips (WC), and green compost (GC) as a mulch, with no fertilizer (NF), poultry litter (PL), and commercial organic fertilizer (CF) as a fertilizer applied in April. Vole damage to trunk and weed density were little correlated with mineral nutrients and tree growth. JB-damaged leaves were highly stimulated to 26.5% in GC-treated plots while tree mortality were increased by MB treatments. Biomass production per tree was approximately 3,700 g on the WC- and GC-treated plots, which was two times higher than those values observed on the other two mulch plots. JB-damaged leaves tended to get worse when nutrients in soil and leaf increased through the correlation analysis, with a strong positive relationship ($r^2=0.585$) observed between JB-damaged leaves and trunk cross sectional area, a vegetative indicator. Tree mortality was more negatively associated with nutrient contents and growth of trees than those of soil nutrients. Wood chips was considered for a local organic mulch materials to increase organic matter contents and to produce healthy young trees in Southern USA, with control insect, such as beetle, and vole density in an orchard habitat.

Substrate roughness induces the development of defective E-cadherin junctions in human gingival keratinocytes

  • Jin, Chengbiao;Lee, Gayoung;Oh, Changseok;Kim, Hyun Jung;Kim, Hyun-Man
    • Journal of Periodontal and Implant Science
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    • v.47 no.2
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    • pp.116-131
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    • 2017
  • Purpose: The entry of bacteria or harmful substances through the epithelial seal of human gingival keratinocytes (HGKs) in the junctional epithelium (JE) is blocked by specialized intercellular junctions such as E-cadherin junctions (ECJs). However, the influence of roughened substrates, which may occur due to apical migration of the JE, root planing, or peri-implantitis, on the development of the ECJs of HGKs remains largely unknown. Methods: HGKs were cultured on substrates with varying levels of roughness, which were prepared by rubbing hydrophobic polystyrene dishes with silicon carbide papers. The activity of c-Jun N-terminal kinase (JNK) was inhibited with SP600125 or by transfection with JNK short hairpin RNA. The development of intercellular junctions was analyzed using scanning electron microscopy or confocal laser scanning microscopy after immunohistochemical staining of the cells for E-cadherin. The expression level of phospho-JNK was assessed by immunoblotting. Results: HGKs developed tight intercellular junctions devoid of wide intercellular gaps on smooth substrates and on rough substrates with low-nanometer dimensions (average roughness $[Ra]=121.3{\pm}13.4nm$), although the ECJs of HGKs on rough substrates with low-nanometer dimensions developed later than those of HGKs on smooth substrates. In contrast, HGKs developed short intercellular junctions with wide intercellular gaps on rough substrates with mid- or high-nanometer dimensions ($Ra=505.3{\pm}115.3nm$, $867.0{\pm}168.6nm$). Notably, the stability of the ECJs was low on the rough substrates, as demonstrated by the rapid destruction of the cell junction following calcium depletion. Inhibition of JNK activity promoted ECJ development in HGKs. JNK was closely associated with cortical actin in the regulation of ECJs in HGKs. Conclusions: These results indicate that on rough substrates with nanometer dimensions, the ECJs of HGKs develop slowly or defectively, and that this effect can be reversed by inhibiting JNK.

Preparation and Characterization of Anti-GP73 Monoclonal Antibodies and Development of Double-antibody Sandwich ELISA

  • Li, Qi-Wen;Chen, Hong-Bing;Li, Zhi-Yang;Shen, Peng;Qu, Li-Li;Gong, Lai-Ling;Xu, Hong-Pan;Pang, Lu;Si, Jin
    • Asian Pacific Journal of Cancer Prevention
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    • v.16 no.5
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    • pp.2043-2049
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    • 2015
  • Background: Serum Golgi protein 73 (GP73) as a novel and potential marker for diagnosing hepatocellular carcinoma (HCC) have been found to be elevated in HCC patients and associated with clinical variables representing tumor growth and invasiveness. The aim of this study was to prepare a pair of monoclonal antibodys (mAbs) against GP73 and develop a newly designed double-antibody sandwich enzyme-linked immunosorbent assay (s-ELISA), which would be used in the detection of serum GP73 (sGP73) as well as in the diagnosis of HCC. Materials and Methods: Produced by prokaryotic expression, the purified recombinant GP73 (rGP73), produced by prokaryotic expression, was used to immunize the Balb/c mice. Two hybridoma cell lines against GP73 were obtained by fusing mouse Sp2/0 myeloma cells with spleen cells from the immunized mice. The titers of anti-GP73 mAb reached 1:243,000. Western blotting analysis and Immunohistochemistry staining revealed that anti-GP73 mAb could recognize GP73 protein. The double-antibody s-ELISA was successfully established and validated by 119 HCC and 103 normal serum samples. Results: showed that the detection limit of this method could reach 1.56 ng/ml, and sGP73 levels in HCC group (mean=190.6 ng/ml) were much higher than those of in healthy controls (mean=70.92 ng/ml). Conclusions: Results of our study not only showed that sGP73 levels of HCC patients were significantly higher than those of healthy controls, but also indicated that the laboratory homemade anti-GP73 mAbs could be the optimal tool used in evaluating sGP73 levels, which would provide a solid foundation for subsequent clinical applications.

Occurrence patterns of insect pests in the field of Lycium chinense under environment-friendly management (친환경 구기자재배지에서 다년간 해충발생양상)

  • Ryu, Tae-Hee;Kang, Chan-Yeong;Jung, Yu-Bin;Ko, Na-Yeon;Kwon, Hye-Ri;Seo, Mi-Ja;Yu, Yong-Man;Youn, Young-Nam;Kim, Yeong-Guk
    • Korean Journal of Agricultural Science
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    • v.41 no.4
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    • pp.341-350
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    • 2014
  • The occurrence of insect pests of Lycium chinense was monitored at 4 organic farms that was cultivated with environment-friendly management at Cheongyang, Chungnam from May, 2012 to September, 2014. Total 4 orders and 18 species occurred in the L. chinense. Among them, 4 major pests and Lepidopteran and Hemipteran insect pests were investigated the occurrence pattern. During the budding, the population density of Myzus persicae was very high in late-May and early-June, and the injury by Lema decempunctata was increased from mid-June. The injuries by Henosepilachna vigintioctomaculata and Hedma lycia sp. were continued throughout the growing season. From the fruit held in late-July, hemipteran insects including Plautia stali and Halyomorpba balys were sucking the fruit, and their injury to L. chinense were gradually increased. In the case of Eriophys macrodonis densities to increase gradually from early July. The population density of E. macrodonis in 2014 was rapidly increased more than 5 times compared with 2012 and 2013. It was supposed that the initial control of mites or the removing of over-wintering density in the past year might be neglected. However, there is a need to more review the factors for the mass occurs.

A Study on the Development and the Verification Experiment of ECDA Equipment (외면부식직접평가 장비 개발 및 실증 시험에 관한 연구)

  • Ryou, Young-Don;Lee, Jin-Han;Jung, Sung-Won;Park, Kyeong-Wan
    • Journal of the Korean Institute of Gas
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    • v.20 no.5
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    • pp.72-81
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    • 2016
  • When the coatings of buried steel pipelines are damaged, corrosion could be occurred on the surface of the damaged areas. Moreover the pinhole occurred by corrosion of pipelines may cause accidents due to gas leakage. To prevent these accidents, foreign countries including UK and USA have carried out coating defect detection on the buried gas pipelines by using a DCVG or a ACVG and have conducted direct assessment of pipelines through digging the ground, and if necessary, have repaired the pipelines. That is called ECDA i.e External Corrosion Direct Assessment which is regulated by NACE standards(SP 0502) and etc. In Korea, the ECDA provisions were included in KGS FS551 in 2014 when the regulations of Safety Validation in Detail for the medium-pressure piping were introduced. We have developed the equipment which can be used to detect external corrosion of the buried gas pipelines. We have also constructed pipeline test bed for empirical test of the developed equipment. In addition, we have carried out the verification experiments of the developed equipment on the test bed to demonstrate the performance of the equipment. The experiments were conducted by comparison tests of the developed equipment and other equipments which have been introduced and used in Korea. As the result, we have found the developed equipment is easier to use and has far superior performance compared to other equipment being used in Korea.