• Korean Journal of Soil Science and Fertilizer
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• v.44 no.2
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• pp.236-241
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• 2011

Soil microbial diversity was responsible for a strong effect on the chemical properties of orchard soils. This study evaluated a relationship between soil chemical properties and soil microbial diversities at 25 sites in orchard soils in Gyeongnam Province. The average nutrients in the orchard soils were 2.6 times for available phosphorous, 2.3 times for exchangeable potassium and 1.3 times for exchangeable calcium higher compared to recommend concentrations in the orchard soils. Contents of available phosphorous and organic matter in the inclined piedmont soils were higher than those in the other topographical soils (p<0.05). Populations of fungi and fluorescence Pseudomonas sp. in the silt loam soils were significantly higher than those in the sandy loam soils (p<0.05). In principal component analysis of chemical properties and microbial populations in the upland soils, our findings suggested that population of bacteria should be considered as potential factor responsible for the clear orchard soils differentiation. The soil organic matter was significantly negative correlation with population of bacteria whereas was positive correlation with population of fungi in orchard soils.

• Korean Journal of Soil Science and Fertilizer
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• v.44 no.5
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• pp.696-701
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• 2011

This study was conducted to investigate impacts of soil properties on microbial distribution in Jeonbuk orchard fields. Soil samples were collected from 110 sites cultivated with different fruit plants. The population of aerobic bacteria and fungi and the content of soil microbial biomass carbon (C) were found to increase with increasing silt content in the soils. Different activity of dehydrogenase was not observed among the different textures of soil. Microbial distribution, amount of microbial biomass C, and dehydrogenase activity in the soils were not significantly different among the topographic sites. However, in pear and grape fruit plant fields, coliform group of bacteria was found in relatively higher population, $133.0{\times}10^3\;CFU\;g^{-1}$ and $107.4{\times}10^3\;CFU\;g^{-1}$, respectively. Microbial groups were simplified and their density was reduced with increasing the cultivation periods of fruit plants. The soil microbial distribution was proportionally correlated with some of soil properties such as soil pH, soil organic matter (SOM) content, and exchangeable Mg content; in particular, the population of Bacillus sp. was proportionally correlated with soil pH and exchangeable Mg content. The amounts of microbial biomass C and the dehydrogenase activity in the soils were significantly correlated with the contents of SOM and exchangeable Ca ion (p<0.01).

• Korean Journal of Soil Science and Fertilizer
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• v.48 no.5
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• pp.442-450
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• 2015

This study was conducted to investigate the effect of Psy-2A-CrtI (PAC), a genetically modified (GM) rice with enhanced ${\beta}$-carotene, on the soil microbial community. The soil used to cultivate GM rice and its wild-type, Nakdong, was analyzed for population density, denaturing gradient gel electrophoresis (DGGE), and pyrosequencing. It was found that the bacterial, fungal and actinomycetes population densities of the PAC soils were within the range of those of the non-GM rice cultivar, Nakdong. The DGGE banding patterns of the GM and non-GM soils were also similar, suggesting that the bacterial community structures were stable within a given month and were unaffected by the presence of a GM plant. The pyrosequencing result showed a temporal difference in microorganism taxon and distribution ratio, but no significant difference between GM and non-GM was found. The persistence of the transgene DNA in the plant and surrounding soil were investigated for different time periods. There were differences in the persistence within the plant depending on the gene, but they could not be detected after 5 weeks. Also the transgenes were not detected in the surrounding soil. These results indicate that soil microbial communities are unaffected by the cultivation of a PAC rice within the experimental time frame.

• Korean Journal of Soil Science and Fertilizer
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• v.44 no.5
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• pp.819-823
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• 2011

The present study evaluated the seasonal changes of the soil microbial population by selected media in an organic farming system (OFS) with rye rotation cropping management compared to those in a conventional farming system (CFS) with chemical fertilizers, pesticide and herbicide from May 2009 to October 2010 in an upland field. With the exception of fungi, populations of aerobic bacteria, Gram-negative bacteria, and Bacillus spp. were higher in the OFS soil during soybean-growing stages. In addition, populations of aerobic bacteria, Gram-negative bacteria, and Bacillus spp. in the OFS soil were nearly two times more than those in the CFS soil on reproductive growth stages. Our findings suggested that Bacillus spp. should be considered as responsible factor for microbial population differentiation observed between the OFS and the CFS in upland fields.

• Korean Journal of Soil Science and Fertilizer
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• v.44 no.6
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• pp.1158-1163
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• 2011

The present study was aimed to evaluate the soil microbial communities by fatty acid methyl ester (FAME) method in paddy soils at 20 sites in Gyeongnam Province. The soil microbial biomass carbon content of fan and valley $1,266mg\;kg^{-1}$ was higher than alluvial plain $578mg\;kg^{-1}$ (p<0.05). In addition, The dehydrogenase activity of fan and valley $204{\mu}g\;TPF\;g^{-1}\;24h^{-1}$ was higher than alluvial plain $93{\mu}g\;TPF\;g^{-1}\;24h^{-1}$ (p<0.05). The communities of total bacteria and Gram-negative bacteria in the fan and valley paddy soils were significantly higher than those in the alluvial plain paddy soils (p<0.05). Total bacteria communities should be considered as a potential responsible factor for the obvious microbial community differentiation that was observed between the fan and valley and alluvial plain in paddy soils.

• Korean Journal of Soil Science and Fertilizer
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• v.44 no.4
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• pp.600-614
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• 2011

Classical methods which used for removal of heavy metals from contaminated water are adsorption, precipitation, coagulation, ion exchange resin, evaporation, and membrane processes. Microbial biosorption can be used for the removal of contaminated waters with pollutants such as heavy metals and dyes which are not easily biodegradable. Microbial biosorbents are inexpensive, eco friendly and more effective for the removal of toxic metals from aqueous solution. In this review, the bacterial and fungal abilities for heavy metals ions removal are emphasized. Environmental factors which affect biosorption process are also discussed. A detailed description for the most common isotherm and kinetic models are presented. This article reviews the achievements and the current status of bacterial and fungal biosorption technology for heavy metals removal and provides insights for further researches.

• Korean Journal of Soil Science and Fertilizer
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• v.44 no.1
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• pp.118-126
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• 2011

Ester-linked fatty acid methyl ester (EL-FAME) profiles were used to describe differences in soil microbial communities influenced by conventional farming system (CFS), and organic farming system (OFS) in controlled horticultural land. Soil physicochemical properties and soil microbial communities were determined in the experimental fields. Higher organic matter content in OFS reduced soil bulk density which in turn increased the soil porosity. Generally, soil chemical properties in OFS were higher than those of CFS, but EC value in OFS was significantly lower than that of CFS. With the exception of Fe content, other macronutrient contents and pH in both farming system decreased with the soil depth. Soil microbial biomass of OFS was approximately 1.3 times in topsoil and 1.8 times in subsoil higher than those of CFS. Lower ratios of cy17:0 to $16:1{\omega}7c$ and cy19:0 to $18:1{\omega}7c$ were found in the CFS soils than the OFS soils, indicating that microbial stress decreased. The ratio of MUFA to SFA was higher in OFS due to organic input to the soil. In principal components analysis (PCA), the first variable accounted for 54.3%, while the second for 27.3%, respectively. The PC1 of the PCA separated the samples from CFS and OFS, while the PC2 of the PCA separated the samples from topsoil and subsoil. EL-FAMEs with the positive eigenvector coefficients for PC1 were cy17: 0 to $16:1{\omega}7c$ ratio, cy19:0 to $18:1{\omega}7c$ ratio, soil pH, soil organic matter, and soil $NO_3$-N content. Our findings suggest that the shifting cy19:0 to $18:1{\omega}7c$ ratio should be considered as potential factors responsible for the clear microbial community differentiation observed between different cultivation systems and soil depth in controlled horticultural land.

• Korean Journal of Soil Science and Fertilizer
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• v.48 no.1
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• pp.36-43
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• 2015

Excess use of chemical fertilizer causes soil acidification and accumulation of salt, and thus might bring to desertification of soil. To overcome this problem, it needs limited usage of chemical fertilizer and increased usage of natural fertilizer as an alternative. In this study, dry soil-borne Bacillus sp. SHL-3, which was isolated from arid and barren soil, with plant growth promoting activity was isolated for identification and to determine optimal culture condition. A bacterial strain SHL-3 had the IAA productivity ($5.16{\pm}0.10mg\;L^{-1}$), ACC deaminase activity ($0.36{\pm}0.09$ at 51 hours) and siderophore synthesis. It was identified as genus Bacillus sp.. Also, optimal culture condition of SHL-3 were $20^{\circ}C$ and pH 7 in LB medium. Bacillus sp. SHL-3 had up to 4% salt tolerance in the medium. We evaluated the plant growth promotion ability of SHL-3 using yam (Dioscorea japonica Thunb.). As a result, Bacillus sp. SHL-3 was effective on the increase of the shoot length (202.4% increase for 91 days). These results indicate that Bacillus sp. SHL-3 can serve as a promising microbial resource for the biofertilizers of soil.

• Korean Journal of Soil Science and Fertilizer
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• v.46 no.3
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• pp.182-186
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• 2013

In this study, we examined the chemical properties and microbial community characteristics in 25 controlled horticultural soils (CHS) sampled from Gyeongnam Province by fatty acid methyl ester (FAME) method. The electrical conductivity of watermelon CHS was significantly (p < 0.05) higher than those of red pepper CHS, pumpkin CHS, and strawberry CHS. The amounts of total FAMEs, total bacteria, gram-negative bacteria, gram-positive bacteria, and fungi were significantly (p < 0.05) higher in red pepper CHS than those in strawberry CHS and pumpkin CHS. In addition, higher (p < 0.05) ratios of cy19:0 to $18:1{\omega}7c$ were detected in tomato CHS than those in watermelon CHS, pumpkin CHS, and red pepper CHS. This implied that microbial communities of tomato CHS were stressed more than other species of cultivation soils. Actinomycetes community in red pepper CHS was significantly (p < 0.05) higher than those in tomato CHS, strawberry CHS, and watermelon CHS. Differences in soil microbial community composition were highly associated with cultivated crop species which might result from the management inputs such as fertilizer, herbicide, and irrigation.

• Korean Journal of Soil Science and Fertilizer
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• v.44 no.2
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• pp.242-247
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• 2011

Soil management for environment-friendly agriculture depends on the effects of soil microbial activities and soil fertility. To improve soil health for the upland crops, this study evaluated a relationship between soil chemical properties and soil microbial diversities at 25 sites in upland soils in Gyeongnam Province. The average nutrients in the upland soils were 1.7 times for available phosphorous, 1.4 times for exchangeable potassium and 1.5 times for exchangeable calcium higher compared to recommend concentrations in the upland soils. We found a significant positive correlation between the soil organic matter and the soil microbial biomass C (p<0.01). Contents of organic matter and dehydrogenase in the inclined piedmont soils were significantly higher than those in the other topographical soils (p<0.05). In addition, concentrations of organic matter and microbial biomass C in the loam soils were significantly higher than in the silt loam soils (p<0.05). In principal component analyses of chemical properties and microbial populations in the upland soils, our findings suggested that available phosphorous should be considered as potential factor responsible for the clear upland soils differentiation. The soil organic matter was positive correlation with Bacillus sp. and fungi, whereas soil pH was also positive correlation with Pseudomonas sp. in upland soils.