• 제목/요약/키워드: SIBs

검색결과 38건 처리시간 0.027초

Discrimination of the commercial Korean native chicken population using microsatellite markers

  • Choi, Nu Ri;Seo, Dong Won;Jemaa, Slim Ben;Sultana, Hasina;Heo, Kang Nyeong;Jo, Cheorun;Lee, Jun Heon
    • Journal of Animal Science and Technology
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    • 제57권2호
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    • pp.5.1-5.8
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    • 2015
  • Background: Korean native chicken (KNC) is a well-known breed due to its superior meat taste. This breed, however, owing to a low growth rate, has a high market price. In order to overcome this disadvantage, the National Institute of Animal Science (NIAS) in Korea developed a commercial KNC breed, named Woorimatdag version 2 (WM2), an upgraded version of the Woorimatdag (WM1) breed and the WM2 was created by crossing the KNC with meat type breeds. This study aims to discriminate between WM2 and other chicken breeds using microsatellite (MS) markers. Methods: A total of 302 individuals from eight Korean chicken populations were examined. The genetic diversity and population structure analysis were investigated using Cervus, API-CALC, STRUCTURE, PowerMarker programs. Results: Based on heterozygosity and polymorphic information content (PIC) values, 30 MS markers were initially selected from 150 markers. The identified average number of alleles (Na), expected heterozygosity, and PIC values for the WM2 samples were 7.17, 0.741, and 0.682, respectively. Additionally, the paternity of individuals was assigned with a success rate of greater than 99% using 12 markers, the best minimum number of markers. The 12 selected markers contained heterozygosity and PIC values above 0.7 and probability of identity values around zero. Using these markers, the determined probability of identity (PI), $PI_{half-sibs}$, and $PI_{sibs}$ values were 3.23E-33, 5.03E-22, and 8.61E-08, respectively. Conclusions: WM2 is well differentiated with respect to other chicken breeds based on estimated genetic distances. The results presented here will contribute to the identification of commercial WM2 chicken in the market.

Phenotypic and Genetic Parameters for Inosine Acid in Relation to Carcass and Meat Quality Traits in Pigs

  • Jiang, X.P.;Liu, G.Q.;Xiong, Y.Z.;Ding, J.T.;Xie, K.Z.;Zhang, J.Q.;Zuo, B.
    • Asian-Australasian Journal of Animal Sciences
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    • 제16권2호
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    • pp.257-260
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    • 2003
  • A total of 135 F2 finishing pigs (65 barrows and 69 gilts) from resource population (Large White${\times}$Meishan) were slaughtered at about 87.8 kg BW. Contents of inosine acid (IMP) and carnine (HR) in muscle were assayed by HLPC and genetic parameters for IMP content and HR content were estimated using full sibs model. There was significant sex effect on IMP content(p<0.05), $3.561{\pm}0.077mg/g$ for gilt and $3.287{\pm}0.085mg/g$ for barrow. Heritability estimates for IMP and HR content were 0.127 and 0.357, respectively. The phenotypic correlation between IMP content and HR was 0.335, pH (A) 0.024, water lose rate (WLR) -0.069, intramuscular fat (IMF) -0.214, average marbling score (MARB) -0.143, average backfat measurements (AVBF) -0.084 and average color value (CV) -0.156, respectively. The result indicated that inosine acid content in meat might be retained or slightly improved by reducing backfat depth in pig breeding.

Hemihypertrophy with hypomelanosis of Ito: A new syndrome combination

  • Goswami, Hit K.;Rangnekar, Aruna G.;Sharma, Sandeep;Varshney, Subodh;Lee, In-Hwan;Chang, Sung-Ik
    • Journal of Genetic Medicine
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    • 제2권1호
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    • pp.1-5
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    • 1998
  • A female hemihypertrophy patient with hypomelanosis of Ito is presented as a rare case combining classical features of both the syndrome. Chromosomal profile has been based on longitudinal study of repeated lymphocyte cultures during 1984-1992. The propositus has exhibited chromosomal mosaicism both hypoploid ($42{\pm}1$) and hyperploid ($48{\pm}2$ chromosome) counts, but the major stem line presented 46XX chromosomes. Ring chromosome with simple and complex translocations with marker dots appear to be the major cytogenetic assemblage of this child to posses unequal left and right halves of the body. Each and every organ from toe to the head has grown up unequally and lately the patient had been exhibiting different dark and light shapes of melanin on the skin. We believe that the patient had inherited, through her male parent, "a few" mutated loci on some chromosomes so as to generate different cell lines within the developing child. All sibs and the mother showed normal karyotype with no apparent aberration.

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Implementation and Design of a Fuzzy Power System Stabilizer Using an Adaptive Evolutionary Algorithm

  • Hwang, Gi-Hyun;Lee, Min-Jung;Park, June-Ho;Kim, Gil-Jung
    • KIEE International Transactions on Power Engineering
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    • 제3A권4호
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    • pp.181-190
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    • 2003
  • This paper presents the design of a fuzzy power system stabilizer (FPSS) using an adaptive evolutionary algorithm (AEA). AEA consists of genetic algorithm (GA) for a global search capability and evolution strategy (ES) for a local search in an adaptive manner when the present generation evolves into the next generation. AEA is used to optimize the membership functions and scaling factors of the FPSS. To evaluate the usefulness of the FPSS, we applied it to a single-machine infinite bus system (SIBS) and a power system simulator at the Korea Electrotechnology Research Institute. The FPSS displays better control performance than the conventional power system stabilizer (CPSS) for a three-phase fault in heavy load, which is used when tuning FPSS. To show the robustness of the FPSS, it is applied with disturbances such as change of mechanical torque and three-phase fault in nominal and heavy load, etc. The FPSS also demonstrates better robustness than the CPSS. Experimental results indicate that the FPSS has good system damping under various disturbances such as one-line to ground faults, line parameter changes, transformer tap changes, etc.

First-principles investigation of the monoclinic NaMnO2 cathode material for rechargeable Na-ion batteries

  • Zhang, Renhui;Lu, Zhibin;Yang, Yingchang;Shi, Wei
    • Current Applied Physics
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    • 제18권11호
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    • pp.1431-1435
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    • 2018
  • Using first-principles calculations, we successfully investigate the electrochemical performance of the monoclinic $NaMnO_2$ for the sodium ion batteries. $NaMnO_2$ possesses a voltage window of 3.54-2.52 V and theoretical reversible capacity of $136mAh\;g^{-1}$. Besides, we find that the metallicity of the monoclinic $NaMnO_2$ gradually increases during Na extraction. Moreover, the computational Na migration energy barrier in the monoclinic $NaMnO_2$ is 0.18 eV, ensuring ideal conductivity and reversible capacity. Although the Jahn-Teller distortion effects limit the enhancement of the reversible capacity of the monoclinic $NaMnO_2$, it is still a right cathode material for the sodium ion batteries. The computational results are well in consistent with the experimental investigations.

Simulation Study on Parentage Analysis with SNPs in the Japanese Black Cattle Population

  • Honda, Takeshi;Katsuta, Tomohiro;Mukai, Fumio
    • Asian-Australasian Journal of Animal Sciences
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    • 제22권10호
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    • pp.1351-1358
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    • 2009
  • Parentage tests using polymorphic DNA marker are commonly performed to avoid incorrect recording of the parental information of livestock animals, and single-nucleotide polymorphisms (SNPs) are becoming the method of choice. In Japanese Black cattle, parentage tests based on the exclusion method using microsatellite markers are currently conducted; however, an alternative SNP system aimed at parentage tests has recently been developed. In the present study, two types of simulations were conducted using the pedigree data of two subpopulations in the breed (subpopulations of Hyogo and Shimane prefectures) in order to examine the effect of actual genetic and breeding structures. The first simulation (simulation 1) investigated the usefulness of SNPs for excluding a close relative of the true sire; the second one (simulation 2) investigated the accuracy of sire identification tests for multiple full-sib putative sires by a combined method of exclusion and paternity assignment based on the LOD score. The success rates of excluding a single fullsib and sire of the true sires were, respectively, 0.9915 and 0.9852 in Hyogo and 0.9848 and 0.9852 in Shimane, when 50 SNPs with minor allele frequency (MAF: q) of 0.25${\leq}$q${\leq}$0.35 were used in simulation 1. The success rates of sire identification tests based solely on the exclusion method were relatively low in simulation 2. However, assuming that 50 SNPs with MAF of 0.25${\leq}$q${\leq}$0.35 or 0.45${\leq}$q${\leq}$0.5 were available, the total success rates including achievements due to paternity assignment were, respectively, 0.9430 and 0.9681 in Hyogo and 0.8999 and 0.9399 for Shimane, even when each true sire was assumed to compete with 50 full-sibs.

알로자임에 의한 무 씨의 순수성 검증 (Determination of Seed Purity in Radish (Raphanus sativus L.) Using Allozyme)

  • 허만규
    • 생명과학회지
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    • 제18권7호
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    • pp.907-911
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    • 2008
  • 무(Raphanus sativus L.)는 세계적으로 중요한 작물 중의 하나이다. 십자화과 식물 종자 생산에서 원하지 않은 내교잡에 의한 종자 결실로 오염이 발생하므로 씨의 순수성 검증은 매우 중요하다. 재배종 진주 대평 무(R. sativus cv. Daepeng)와 백자 무(R. sativus cv. Backza)의 교잡 분석을 실시하였다. 알로자임으로 상업적으로 이용되는 잡종 제1세대($F_1$) 무에 있어서 씨의 순수성을 평가하였다. 웅성과 자성 양친 360개체에 27개 대립유전자좌위를 조사하였다. 특히 Par-1 ($aa{\times}bb$), Lap-1($aa{\times}bb$), Est-1 ($aa{\times}bb$)에서 명확한 잡종 밴드를 나타내었다. Est-1 대립유전자좌위에서 자성 배우체로부터 기원된 것이 15개체(8.3%)가 발견되었고, 웅성 배우체로부터 기원된 것이 26개체(14.4%)가 발견되었다. 또한 다양도 측면에서 양친 계통에 비해 잡종 계통에서 높은 유전적 다양도를 유지하고 있었다. 샤논의 정보지수(Shannon's index)를 이용한 표현형 다양도는 교잡 계통이 가장 높았다. 알로자임에 의한 무 계통의 교잡에 의한 종자 생성에서 씨에 대한 순수성 검증이 효과적으로 탐지되어 육종 연구에 기여할 수 있을 것으로 판단된다.

Statistical Analysis of Stillbirths in Different Genotypes of Sows

  • Chu, M.X.
    • Asian-Australasian Journal of Animal Sciences
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    • 제18권10호
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    • pp.1475-1478
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    • 2005
  • Statistical analysis was conducted on sow stillbirth traits of three genotypes with 2,400 litters including the Erhualian, Large White and the $F_1$ cross of these two breeds. Number of stillborn piglets per litter in the Erhualian, Large White and the $F_1$ averaged 0.85, 0.31 and 0.70, and percentage born alive averaged 95.0%, 97.0% and 95.5%, respectively. Erhualian sows with a greater litter size also had a higher stillbirth rate. Results of analysis of variance indicated that genotype, parity, farrowing year${\times}$farrowing season interaction and total number born had highly significant effects on both number of stillborn piglets per litter and percentage born alive in sows (p<0.0001). Farrowing year had no significant effect on number of stillborn piglets per litter (p>0.05), and highly significant effect on percentage born alive (p<0.01). Farrowing season had highly significant effects on both number of stillborn piglets per litter and percentage born alive (p<0.01). From parity one to parity ten, least squares means for number of stillborn piglets per litter progressively increased with increasing parity and least squares means for percentage born alive progressively decreased with increasing parity. Sows that farrowed in winter had the highest number of stillborn piglets per litter and the lowest percentage born alive, sows that farrowed in autumn had the lowest number of stillborn piglets per litter and the highest percentage born alive. With increasing total number born, least squares means for number of stillborn piglets per litter markedly increased and least squares means for percentage born alive markedly decreased. Results from analysis of paternal half sibs indicated that the heritabilities for number of stillborn piglets per litter and percentage born alive were 0.110 and 0.124, and the genetic, phenotypic and environmental correlations between them were -0.989, -0.951 and -0.948, respectively. These results indicated that number of stillborn piglets per litter and percentage born alive were traits with the similar genetic background.

Effects of the Chicken Sex-linked Dwarf Gene on Growth and Muscle Development

  • Chen, C.F.;Chen, Y.H.;Tixier-Boichard, M.;Cheng, P.Y.;Chang, C.S.;Tang, P.C.;Lee, Y.P.
    • Asian-Australasian Journal of Animal Sciences
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    • 제22권7호
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    • pp.937-942
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    • 2009
  • The aim of this study was to analyze the effects on growth and muscle development during the growing period of the sex-linked dwarf gene in the background of a Taiwan Country chicken strain, L2, selected for egg production. Eight crossbred males, heterozygous for the DW*DW mutation, were each backcrossed to six females of the L2 strain to produce two genotypes of BC females, either normal (DW*N+/-) or dwarf (DW*DW/-). The experiment included 251 normal and 207 dwarf pullets. The effect of the dwarf gene on body weight and shank length was highly significant from 2 weeks of age. The reduction of body weight by the dwarf gene reached 34.8% and 37.4% as compared to normal sibs at 16 and 20 weeks of age, respectively. Parameters of the growth curve were estimated: the age at inflection (TI) was higher in normal pullets (66.9 days) than in dwarf pullets (61.2 days). A significant effect of the dwarf gene on single muscle fiber cross-section area was found from 12 weeks of age onwards, whereas the dwarf gene had no effect on the total number of muscle fibers. Comparing the effect of the dwarf gene on shank length at different ages revealed an earlier effect on skeleton growth, observed from 2 weeks of age, than on muscle development, which was affected from 8 to 12 weeks of age.

나트륨이차전지용 전환반응 음극 소재 기술 동향 (Research Trend on Conversion Reaction Anodes for Sodium-ion Batteries)

  • 김수지;김유진;류원희
    • 전기화학회지
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    • 제22권1호
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    • pp.22-35
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    • 2019
  • 이차 전지의 개발이 전기자동차나 스마트그리드와 같은 중대형의 에너지저장장치로 응용범위가 확대됨에 따라 이차 전지의 경제성확보가 화두가 되고 있다. 나트륨이차전지는 리튬보다 훨씬 저렴한 나트륨원료를 사용하여 저가의 차세대 이차 전지로 크게 주목받고 있다. 이에 따라 이온 반경이 큰 나트륨이온의 삽입과 탈리를 원활하게 해줄 수 있는 음극 소재의 개발이 최근 몇 년간 활발히 수행되어 왔다. 나트륨이차전지용 음극은 세 가지의 반응 메커니즘 (층간 삽입반응, 금속-합금반응, 전환반응)을 기반한 소재들이 보고되었으며, 본 총설에서는 전환반응으로 구동하는 다양한 음극 소재들을 소개하며 나트륨 전지 셀 내 반응 메커니즘을 소개하고자 한다.