• Title/Summary/Keyword: Petiole analysis

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Diversity of Fungal Endophytes in Various Tissues of Panax ginseng Meyer Cultivated in Korea

  • Park, Young-Hwan;Lee, Soon-Gu;Ahn, Doek-Jong;Kwon, Tae-Ryong;Park, Sang-Un;Lim, Hyoun-Sub;Bae, Han-Hong
    • Journal of Ginseng Research
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    • v.36 no.2
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    • pp.211-217
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    • 2012
  • Endophytic fungi were isolated from various tissues (root, stem, petiole, leaf, and flower stalk) of 3- and 4-year-old ginseng plants (Panax ginseng Meyer) cultivated in Korea. The isolated endophytic fungi were identified based on the sequence analysis of the internal transcribed spacer (ITS), 1-5.8-ITS 2. A morphological characterization was also conducted using microscopic observations. According to the identification, 127 fungal isolates were assigned to 27 taxa. The genera of Phoma, Alternaria and Colletotrichum were the most frequent isolates, followed by Fusarium, Entrophospora and Xylaria. Although 19 of the 27 taxa were identified at the species level, the remainder were classified at the genus level (6 isolates), phylum level (Ascomycota, 1 isolate), and unknown fungal species (1 isolate). Endophytic fungi of 13 and 19 species were isolated from 3- and 4-year-old ginseng plants, respectively, and Phoma radicina and Fusarium solani were the most frequently isolated species colonizing the tissues of the 3- and 4-year-old ginseng plants, respectively. The colonization frequency (CF%) was dependant on the age and tissue examined: the CFs of the roots and stems in the 3-year-old ginseng were higher than the CF of tissues in the 4-year-old plants. In contrast, higher CFs were observed in the leaves and petioles of 4-year-old plants, and endophytic fungi in the flower stalks were only detected in the 4-year-old plants. In conclusion, we detected diverse endophytic fungi in ginseng plants, which were distributed differently depending on the age and tissue examined.

Isolation, Characterization and Numerical Taxonomy of Novel Oxalate-oxidizing Bacteria

  • Sahin, Nurettin;Gokler, Isa;Tamer, Abdurrahman
    • Journal of Microbiology
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    • v.40 no.2
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    • pp.109-118
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    • 2002
  • The present work is aimed at providing additional new pure cultures of oxalate utilizing bacteria and its preliminary characterization for further work in the field of oxalate-metabolism and taxonomic studies. The taxonomy of 14 mesophilic, aerobic oxalotrophic bacteria isolated by an enrichment culture technique from soils rhizosphers, and the juice of the petiole/stem tissue of plants was investigated. Isolates were characterized with 95 morphological, biochemical and physiological tests. Cellular lipid components and carotenoids of isolates were also studied as an aid to taxonomic characterization. All isolates were Gram-negative, oxidase and catalase positive and no growth factors were required. In addition to oxalates, some of the strains grow on methanol and/or formate. The taxonomic similarities among isolates, reference strains or previously reported oxalotrophic bacteria were analysed by using the Simple Matching (S/ sub SM/) and Jaccard (S$\_$J/) Coefficients. Clustering was performed by using the unweighted pair group method with arithmetic averages (UPGMA) algorithm. The oxalotrophic strains formed five major and two single-member clusters at the 70-86% similarity level. Based on the numerical taxonomy, isolates were separated into three phenotypic groups. Pink-pigmented strains belonged to Methylobacterium extorquens, yellow-pigmented strains were most similar to Pseudomonas sp. YOx and Xanthobacter autorophicus, and heterogeneous non-pigmented strains were closely related to genera Azospirillum, Ancylobacter, Burkholderia and Pseudomonas. New strains belonged to the genera Pseudomonas, Azospirillum and Ancylobacter that differ taxonomically from other known oxalate oxidizers were obtained. Numerical analysis indicated that some strains of the yellow-pigmented and nonpigmented clusters might represent new species.

A Study on the Identification Key of Medicinal Herbs Used as Bangki (방기류(防己類) 한약재의 감별기준 연구)

  • Jo, Kyung-Ik;Yoon, Jee-Hyun;Kim, Young-Sik;Ju, Young-Sung
    • The Korea Journal of Herbology
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    • v.32 no.6
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    • pp.49-54
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    • 2017
  • Objectives : Bangki is commonly Sinomeni Caulis et Rhizoma (SC) in Korea. But it often confused with others such as Cocculi Radix (CR), Stephaniae Tetrandrae Radix (SR) and Aristolochiae Fangchi (AR) due to the similarity in herbal names and morphological characteristics. However, because all of these types of Bangi have different healing properties, they need to be differentiated. Methods : A discrimination on external features of original plants and external characteristics of herbal medicines was carried out using visual examination, stereoscope. For the examination of Internal characteristics of herbal medicines, tissues were dyed using fast green FCF, hematoxylin and safranin O, and the features were observed by the microscope. Results : In external morphology of original plants, the original plants of SC and AR were lignum plants and others were herbaceous plants. The leaf blade and the petiole were another discriminative criteria. In external morphology of herbal medicines, SR and AR have powders and others didn't. Also, SC and CR were determined by the dense of the radiation pattern in the cross section. In internal morphology of herbal medicines, SR and AR were distinguished by the dense of Stone cells. Moreover, SC and CR were different in the pattern of medullary ray and vascular bundle. Conclusions : The results above could be used as identification keys of Bangki. Moreover, these identifications might attribute as a fundamental material to further studies like physicochemical pattern analysis and biological reaction.

A systematic study of the Polygonum amphibium L. complex (Polygonaceae) based on chloroplast DNA sequences (엽록체 DNA 염기서열에 근거한 물여뀌 종집단(마디풀과)의 분류학적 연구)

  • Yaqian, Gao;Bhandari, Gauri Shankar;Park, Jin Hee;Park, Chong-Wook
    • Korean Journal of Plant Taxonomy
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    • v.43 no.1
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    • pp.34-45
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    • 2013
  • The Polygonum amphibium complex (Poygonaceae) is a highly polymorphic taxon that can grow in aquatic environments as well as in moist terrestrial habitats. Aquatic and terrestrial plants of the P. amphibium complex vary significantly in morphology and exhibit very complicated patterns of morphological variation, resulting in the description of numerous infra-specific taxa. Principal components analysis of 107 individuals of the P. amphibium complex from Asia and North America using 11 morphological characters showed that the aquatic plants can be discerned from the terrestrial plants by leaf size, shape, and petiole length. In contrast, both aquatic and terrestrial plants collected from the same population or locality shared identical sequences in the matK, psbA-trnH IGS, rbcL-accD IGS and trnL-trnF regions of the chloroplast DNA (cpDNA), suggesting that aquatic and terrestrial forms of the P. amphibium complex are not genetically diverged; morphological differences between the two forms are probably due to the differences in environmental conditions of the habitats. In addition, results from the morphological analysis and the maximum parsimony analysis of the cpDNA data set revealed that the plants from Asia including Korea, Japan, China, Mongolia and Russia Far East are diverged from those in North America and Europe, suggesting that the Asian populations should be recognized as a distinct variety, P. amphibium var. amurense Korsh.

Studies on Morphological Variation Among Provenances of a Rare Rhododendron micranthum in Korea (희귀 식물 꼬리진달래의 형태적 변이)

  • Kim, Nam Young;Kim, Heung Sik;Kim, Sol Young;Park, Wan Geun
    • Journal of Korean Society of Forest Science
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    • v.95 no.1
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    • pp.55-59
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    • 2006
  • The objectives of this study, an analysis of the morphological characteristics among six provenances of a rare Rhododendron micranthum could be used for the conservation of gene resources and could provide information on superior trees selection. The following results were obtained. Approximately Mt.worak region showed larger values at petal character. On the other hand, Bonghwa region showed smaller values at petal character. Yeonha-ri region showed larger values at leaf character. On the other hand, Bonghwa region showed smaller values at leaf character. The results of principal component analysis (PCA) for morphological characteristics showed that the first for principal components(PC's) explained 41.6% of the total variation. From th third PC explained 81.5% of the total variation. The first PC was correlated with those characteristics that were mainly related to the Petal length (PL), Leaf length (LL) width (LW), Stigma length (SL). The second PC was correlated with the Petiole length (PTW), Anther length (AL). The third PC was correlated with the Flower pedicel length (FPL), Filament length (FL). Therefore, these characteristics was important to analysis of the variation for morphological characteristics among provenances of Rhododendron micranthum. Cluster analysis using single linkage method based on morphological characteristics showed that six provenances of Rhododendron micranthum could be clustered into three groups. Group I is Jicdong-ri, Group II is Mt.worak and Yeonha-ri, and Group III is Taeback, Bonghwa, and Samcheok. These results corresponded well with that of principal component analysis.

Analysis of Morphological Characteristics and Variation among Six Populations of Pourthiaea villosa (Thunb.) Decne. var. villosa in Korea (국내 윤노리나무 6개 집단의 형태적 특징과 변이조사)

  • Nam, Jae-Ik;Choi, Go-Eun;Kim, Young-Me;Park, Jae-In
    • Korean Journal of Plant Resources
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    • v.28 no.1
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    • pp.26-34
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    • 2015
  • This study was conducted to examine the morphological characteristics and variations of the 6 populations of Pourthiaea. villosa (Thunb.) Decne. var. villosa in Korea. The ANOVA results showed that the populations were significantly different in 18 of the 21 quantitative characteristics that were analyzed. In the results of principal component analysis, 6 principal components (PC) represented 68.28% for the total variations. 'Petiole length' (0.764), 'Leaf shape' (0.834), 'Leaf length' (0.753), 'Crown diameter' (0.663), 'Inflorescence width' (0.492), and 'Leaf base shape' (0.721) showed the highest contribution to PC1, PC2, PC3, PC4, PC5, and PC6, respectively. According to the results of cluster analysis, one cluster comprised only 'Goesan-gun Ssanggok Valley' population. 'Namhae-gun Mijori Evergreen Forest' population was grouped with 'Hamyang-gun Sang Forest' population, which was the nearest subgroup. Further, 'Namhae-gun Geum Mountain' population, 'Jindo-gun Cheomchal Mountain' population, and 'Jeju-si Barimae Parasitic volcano' population were placed in the same cluster.

Possibility of Drought stress Indexing by Chlorophyll Fluorescence Imaging Technique in Red Pepper (Capsicum annuum L.) (고추의 엽록소 형광 이미지 분석법에 의한 한발스트레스 지표화 가능성)

  • Yoo, Sung-Yung;Eom, Ki-Cheol;Park, So-Hyun;Kim, Tae-Wan
    • Korean Journal of Soil Science and Fertilizer
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    • v.45 no.5
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    • pp.676-682
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    • 2012
  • The objectives of this study focused on measuring chlorophyll fluorescence related to drought stress comparing some parameters. Almost parameters were declined although they were not significant on the basis of mean values of fluorescence of total leaf area. While the ratio of fluorescence intensity variable chlorophyll ($F_V$) to fluorescence intensity maximal chlorophyll ($F_M$) was not changed, the effective quantum yield of photochemical energy conversion in photosystemII (${\Phi}PSII$) and chlorophyll fluorescence decrease ratio ($R_{fd}$) were slightly reduced, indicating inhibition of the electron transport from quinone bind protein A ($Q_A$) to quinone bind protein B ($Q_B$). Some parameters such as non-photochemical quenching rate ($NPQ_{_-LSS}$) and coefficients of non-photochemical quenching of variable fluorescence (qN) in mid-zone of leaf and near petiole zone leaf were significantly enhanced within 4 days after drought stress, which can be used as physiological stress parameters. Decrease in ${\Phi}PSII$ could was significantly measured in all leaf zones. In conclusion, three parametric evidences for chlorophyll fluorescence responses such as ${\Phi}PSII$, NPQ, and qN insinuated the possibility of photophysiological indices under drought stress.

Analysis of Triterpene Glycoside Levels and Antioxidant Activity in the Different Shoot Tissues of Centella asiatica (L.) Urban (병풀 지상부 조직에서 시기별 triterpene glycoside 함량 및 항산화활성 분석)

  • Kil, Young Sook;Sin, Seung Mi;Lee, Dong Yeol;Jeong, Won Min;Yang, Ki jeung;Lee, Shin-Woo;Kim, Yun-Hee;Goo, Young-Min
    • Journal of Life Science
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    • v.28 no.8
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    • pp.917-922
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    • 2018
  • Centella asiatica is one of the local herbs that is claimed to possess various physiological effects. C. asiatica also accumulates large amounts of pentacyclic triterpenoid saponins known as centelloids. These terpenoids usually include asiatic acid, asiaticoside, madecassoside, and madecassic acids. In the present study, to understand the changes of triterpene glycoside levels in the different shoot tissues of C. asiatica during seasonal cultivation, we investigated the High-Performance Liquid Chromatography (HPLC) analysis via different extraction methods, such as water, 20% ethanol and methanol extracts. Significant increases were observed in the levels of madecassoside and asiaticoside in the leaf extracts by methanol compare with extracts using water or 20% ethanol. Additionally, we also analyzed the various antioxidant activity in the different shoot tissues of C. asiatica using different extracts, such as leaves, petioles and both materials. Among these petiole extracts showed high 2,2-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTs) scavenging activity in all extracts, whereas 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging activity exhibited high activity levels in the leaf part using methanol and ethanol extracts. Levels of total phenolics and flavonoid also showed the highest levels in the leaf tissues using all extracts such as methanol, ethanol and water. Our results indicated that the increased levels of triterpene glycoside and antioxidant activity in the leaf parts of the C. asiatica were indicating that useful metabolites were mainly maintained through seasonal cultivation such as madecassoside, asiaticoside.

Growth Analysis of Angelica gigas Nakai Affected by Cultivation Methods (참당귀(Angelica gigas Nakai)의 직파 및 이식재배에 따른 생장해석)

  • Nam, Hyo-Hoon;Choi, Don-Woo;Kim, Kil-Ung;Kwon, Oh-Heun;Choi, Boo-Sull
    • Korean Journal of Medicinal Crop Science
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    • v.7 no.3
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    • pp.218-228
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    • 1999
  • This study was conducted to obtain the information on dry matter productivity in Angelica gigas Nakai for establishing the cultivation method. Cultivation methods such as direct seeding on Mar. 31, Apr. 15 and Apr. 30, and transplanting of $8^{\frac{1}{2}}$, 9, 12 months old seedling were investigated. There were similar tendencies in changes of agronomic characters for all cultivation methods. Dry weight started to increase from 120 DAS. Direct seedling showed vigorous growth for aerial part, whereas transplanting showed better underground part. The quadratic polynomial was suitable to dry weight of root after 120 DAS (or DAT) .Short growing time had higher RGR and NAR independent of cultivation method but Direct seeding on Mar. 31 and transplanting of 9 months old seedling had the highest CGRs. LAI was positively correlated with CGR, and CGR had the highest value as $6.74\g/m^2/day$ when LAI was 1.97. RGR and NAR increased as mean temperature was increased and showed the highest value around . The highest net production of leaf and petiole was obtained at 20 and$23^{\circ}C$, respectively.

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Frequency and Growth Characteristics of Polyploids Occurred Spontaneously in Some Mandarin Hybrids (만다린 잡종에서 자연발생 배수체의 발생 빈도와 생장 특성)

  • Song, Kwan-Jeong;Kim, Sat-Byul;Park, Jae-Hyun;Oh, Eun-Ui;Lee, Kyung-Uk;Kim, Dong-Wook;Kang, Jong-Hoon;Kim, Jeong-Soon;Oh, Jeong-Hwan;Gmitter, Fred G.
    • Horticultural Science & Technology
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    • v.29 no.6
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    • pp.617-622
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    • 2011
  • The study was conducted to determine the efficiency in producing spontaneous polyploids in some mandarin hybrids with different seed embryony. Seed formation by open pollination, frequency of spontaneous polyploids, and plant growth characteristics were evaluated in four mandarin hybrids with polyembryony such as 'Amakusa', 'Haruka', 'Hayaka', and 'Seminole' and two with monoembryony such as 'Benibae' and 'Harehime'. The mean number of the developed seeds per fruit was 10.0 and frequency of small seeds was 25.1%. Polyploids were selected from plants germinated in vitro by a flow cytometry and confirmed by chromosome analysis. One triploid was produced from 'Harehime', one tetraploid, 'Amakusa', and one tetrapoid, 'Benibae'. There were little differences in leaf shape, thickness, petiole length, and internode length between diploids and polyploids such as tri- or tetraploid. However, polyploids had larger stomata and lower density of stomata in abaxial epidermis than diploids. SPAS indicating chlorophyll content and photosynthetic rate were significantly affected by ploidy level. The results indicated that spontaneous polyploids might be produced by open pollination in some mandarin hybrids and monoembryony had higher frequency in polyploid occurrence than polyembryony.