• 제목/요약/키워드: Parameter selection

검색결과 722건 처리시간 0.029초

Survey on Nucleotide Encoding Techniques and SVM Kernel Design for Human Splice Site Prediction

  • Bari, A.T.M. Golam;Reaz, Mst. Rokeya;Choi, Ho-Jin;Jeong, Byeong-Soo
    • Interdisciplinary Bio Central
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    • 제4권4호
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    • pp.14.1-14.6
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    • 2012
  • Splice site prediction in DNA sequence is a basic search problem for finding exon/intron and intron/exon boundaries. Removing introns and then joining the exons together forms the mRNA sequence. These sequences are the input of the translation process. It is a necessary step in the central dogma of molecular biology. The main task of splice site prediction is to find out the exact GT and AG ended sequences. Then it identifies the true and false GT and AG ended sequences among those candidate sequences. In this paper, we survey research works on splice site prediction based on support vector machine (SVM). The basic difference between these research works is nucleotide encoding technique and SVM kernel selection. Some methods encode the DNA sequence in a sparse way whereas others encode in a probabilistic manner. The encoded sequences serve as input of SVM. The task of SVM is to classify them using its learning model. The accuracy of classification largely depends on the proper kernel selection for sequence data as well as a selection of kernel parameter. We observe each encoding technique and classify them according to their similarity. Then we discuss about kernel and their parameter selection. Our survey paper provides a basic understanding of encoding approaches and proper kernel selection of SVM for splice site prediction.

멀티미디어 트래픽을 위한 서비스 품질 보장형 망의 최선형 표준 트래픽 기술자 계산 방식 (An Optimal parameter selection Algorithm for standard-compatible traffic descriptors for multimedia traffic)

  • 안희준;오혁준
    • 한국통신학회논문지
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    • 제30권5A
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    • pp.370-375
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    • 2005
  • 인터넷 및 통신망 국제표준 단체들은 자신들의 망에서 서비스 품질 보장형 기능을 제공하기 위한 방안으로써 공통적으로 리키버킷에 의한 입력 트래픽 정의 방법을 채택하고 있다. 반면, 그동안 연구결과는 멀티미디어 트래픽의 버스트특성이 시간적으로 광범위한 준위에 걸쳐 있음을 확인하고 있다. 이러한 두개의 상반되는 현실을 해결하기 위하여 본 논문에서는 임계 시준위 개념을 사용한 표준적 트래픽 기술자계산 방법을 제안하고 이를 시뮬레이션을 통하여 분석하였다. 제안된 알고리듬은 지연치가 주어진 상태에서 최상의 성능을 얻음을 수학적으로 증명하였고, 실제 시스템 응용에 대하여 제안하였다.

Asymmetrically Reweighted Penalized Least Squares을 이용한 기준선 보정에서 최적 매개변수 자동 선택 방법 (Automatic Selection of Optimal Parameter for Baseline Correction using Asymmetrically Reweighted Penalized Least Squares)

  • 박아론;백성준;박준규;서유경;원용관
    • 전자공학회논문지
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    • 제53권3호
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    • pp.124-131
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    • 2016
  • 분광법을 이용한 많은 응용에서 스펙트럼 데이터의 기준선 보정은 분석 시스템의 성능을 좌우하는 매우 중요한 과정이다. 기준선은 많은 경우에 육안 검사로 매개변수를 선택하여 추정한다. 이 과정은 매우 주관적이고 특히 대량의 데이터인 경우 지루한 작업을 동반하므로 좋은 분석 결과를 보장하기 어렵다. 이러한 이유로 기준선 보정에서 최적의 매개변수를 자동으로 선택하기 위한 객관적인 방법이 필요하다. 이전의 연구에서 PLS(penalized least squares) 방법에 새로운 가중 방식을 도입하여 기준선을 추정하는 arPLS(asymmetrically reweighted PLS) 방법을 제안하였다. 본 연구에서는 arPLS 방법에서 최적의 매개변수를 자동으로 선택하는 방법을 제안한다. 이 방법은 가능한 매개변수의 범위에서 추정한 기준선의 적응도와 평활도를 계산한 다음 정규화한 적응도와 평활도의 합이 최소가 되는 매개변수를 선택한다. 경사 기준선, 곡선 기준선, 이중 곡선 기준선의 모의실험 데이터와 실제 라만 스펙트럼을 이용한 실험에서 제안한 방법이 기준선 보정을 위한 최적 매개변수의 선택에 효과적으로 적용될 수 있음을 확인하였다.

회전기계 결함신호 진단을 위한 신호처리 기술 개발 (Signal Processing Technology for Rotating Machinery Fault Signal Diagnosis)

  • 최병근;안병현;김용휘;이종명;이정훈
    • 한국소음진동공학회:학술대회논문집
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    • 한국소음진동공학회 2013년도 추계학술대회 논문집
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    • pp.331-337
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    • 2013
  • Acoustic Emission technique is widely applied to develop the early fault detection system, and the problem about a signal processing method for AE signal is mainly focused on. In the signal processing method, envelope analysis is a useful method to evaluate the bearing problems and Wavelet transform is a powerful method to detect faults occurred on rotating machinery. However, exact method for AE signal is not developed yet. Therefore, in this paper two methods which are Hilbert transform and DET for feature extraction. In addition, we evaluate the classification performance with varying the parameter from 2 to 15 for feature selection DET, 0.01 to 1.0 for the RBF kernel function of SVR, and the proposed algorithm achieved 94% classification accuracy with the parameter of the RBF 0.08, 12 feature selection.

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모델보정을 위한 구조물 매개변수 규명시 가진점 .측정점의 선정 (Excitation and Measurement Points Selection to Identify Structural Parameters for Model Tuning)

  • 박남규;박윤식
    • 대한기계학회논문집A
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    • 제24권5호
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    • pp.1271-1280
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    • 2000
  • A sensor placement technique to identify structural parameter was developed. Experimental results must be acquired to identify unknown dynamic characteristics of a targeting structure for the comparison between analytical model and real structure. If the experimental environment was not equipped itself properly, it can be happened that some valuable information are distorted or ill-condition can be occurred. In this work the index to determine exciting points was derived from the criterion of maximizing parameter sensitivity matrix and that to choose measurement points was from that of preserving the invariant of sensitivity matrix. This idea was applied to a compressor hull structure to verify its performance. The result shows that the selection of measurement and excitation points using suggested criteria improve the ill-conditioning problem of inverse type problems such , as model updating.

선삭변수 최적화를 위한 진화 알고리듬 응용 (Turning Parameter Optimization Based on Evolutionary Computation)

  • 이성열;곽규섭
    • 경영과학
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    • 제18권2호
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    • pp.117-124
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    • 2001
  • This paper presents a machining parameter selection approach using an evolutionary computation (EC). In order to perform a successful material cutting process, the engineer is to select suitable machining parameters. Until now, it has been mostly done by the handbook look-up or solving optimization equations which is inconvenient when not in handy. The main thrust of the paper is to provide a handy machining parameter selection approach. The EC is applied to rapidly find optimal machining parameters for the user\\`s specific machining conditions. The EC is basically a combination of genetic a1gorithm and microcanonical stochastic simulated annealing method. The approach is described in detail with an application example. The paper concludes with a discussion on the potential of the proposed approach.

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Two Sample Tests in the Weibull Distribution

  • Park, Won-Joon
    • Journal of the Korean Statistical Society
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    • 제8권2호
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    • pp.99-105
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    • 1979
  • In Thoman and Bain and Schafer and Sheffield, procedures for testing the equality of the scale parameters of two Weibull populations with a common shape parameter and procedures for selecting the Weibull population with the largest scale parameter are given. We give, in this paper, a modified procedure for the above testing and selection problems, which is more powerful than those previoulsy given.

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Bayesian Confidence Intervals in Penalized Likelihood Regression

  • Kim Young-Ju
    • Communications for Statistical Applications and Methods
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    • 제13권1호
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    • pp.141-150
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    • 2006
  • Penalized likelihood regression for exponential families have been considered by Kim (2005) through smoothing parameter selection and asymptotically efficient low dimensional approximations. We derive approximate Bayesian confidence intervals based on Bayes model associated with lower dimensional approximations to provide interval estimates in penalized likelihood regression and conduct empirical studies to access their properties.

Outage Probability of Decode-and-Forward Relaying Systems with Efficient Partial Relay Selection in Nakagami Fading Channels

  • Lee, Sangjun;Lee, Howon;Choi, Hyun-Ho;Lee, In-Ho
    • ETRI Journal
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    • 제36권1호
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    • pp.22-30
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    • 2014
  • Recently, efficient partial relay selection (e-PRS) was proposed as an enhanced version of PRS. In comparing e-PRS, PRS, and the best relay selection (BRS), there is a tradeoff between complexity and performance; that is, the complexity for PRS, e-PRS, and BRS is low to high, respectively, but vice versa for performance. In this paper, we study the outage probability for e-PRS in decode-and-forward (DF) relaying systems over non-identical Nakagami-m fading channels, where the fading parameter m is an integer. In particular, we provide closed-form expressions of the exact outage probability and asymptotic outage probability for e-PRS in DF relaying systems. Numerical results show that e-PRS achieves similar outage performance to that of BRS for a low or medium signal-to-noise ratio, a high fading parameter, a small number of relays, and a large difference between the average channel powers for the first and the second hops.

A Structure of Personalized e-Learning System Using On/Off-line Mixed Estimations Based on Multiple-Choice Items

  • Oh, Yong-Sun
    • International Journal of Contents
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    • 제5권1호
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    • pp.51-55
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    • 2009
  • In this paper, we present a structure of personalized e-Learning system to study for a test formalized by uniform multiple-choice using on/off line mixed estimations as is the case of Driver :s License Test in Korea. Using the system a candidate can study toward the license through the Internet (and/or mobile instruments) within the personalized concept based on IRT(item response theory). The system accurately estimates user's ability parameter and dynamically offers optimal evaluation problems and learning contents according to the estimated ability so that the user can take possession of the license in shorter time. In order to establish the personalized e-Learning concepts, we build up 3 databases and 2 agents in this system. Content DB maintains learning contents for studying toward the license as the shape of objects separated by concept-unit. Item-bank DB manages items with their parameters such as difficulties, discriminations, and guessing factors, which are firmly related to the learning contents in Content DB through the concept of object parameters. User profile DB maintains users' status information, item responses, and ability parameters. With these DB formations, Interface agent processes user ID, password, status information, and various queries generated by learners. In addition, it hooks up user's item response with Selection & Feedback agent. On the other hand, Selection & Feedback agent offers problems and content objects according to the corresponding user's ability parameter, and re-estimates the ability parameter to activate dynamic personalized learning situation and so forth.