• 제목/요약/키워드: PTI

검색결과 57건 처리시간 0.025초

Characterization of Phytophthora capsici effector genes and their functional repertoire

  • Arif, Saima;Lim, Gi Taek;Kim, Sun Ha;Oh, Sang-Keun
    • 농업과학연구
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    • 제48권3호
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    • pp.643-654
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    • 2021
  • Phytophthora capsici is one of the most destructive hemibiotrophic pathogens; it can cause blight in chili peppers, and secrete various effector proteins to infect the plants. These effectors contain an N-terminal conserved RXLR motif. Here, we generated full-length RXLR effector coding genes using primer pairs, and cloned them into the pGR106 vector for in planta expression. Two of these genes, PcREK6 and PcREK41 (P. capsici RXLR effector from the Korea isolate), were further characterized. PcREK6 and PcREK41 genes showed that they encode effector proteins with a general modular structure, including the N-terminal conserved RXLR-DEER motif and signal peptide sequences. PcREK6 and PcREK41 expressions were strongly induced when the chili pepper plants (Capsicum annuum) were challenged with P. capsici. These results provide molecular evidence to elucidate the virulence or avirulence factors in chili pepper. Our results also showed that two effectors induce hypersensitive response (HR) cell death when expressed in chili leaves. Cell death suppression assays in Nicotiana benthamiana revealed that most effectors could not suppress programmed cell death (PCD) triggered by Bcl-associated X (BAX) or Phytophthora infestans elicitin (INF1). However, PcREK6 fully suppressed PCD triggered by BAX, while PcREK41 partially suppressed PCD triggered by INF1 elicitin. These results suggest that PcREK effectors from P. capsici interact with putative resistance (R) proteins in planta, and different effectors may target different pathways in a plant cell to suppress pattern-triggered immunity (PTI) or effector-triggered immunity (ETI).

The Physicochemical Properties of Starch from Tongil-type Rice Varieties

  • Jong-Hee Shin;Chae-Min Han;Young-Un Song;Sang-Kuk Kim;Jung-Gi Ryu
    • 한국작물학회지
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    • 제68권3호
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    • pp.99-105
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    • 2023
  • Starch characteristics and pasting properties of Tongil-type rice varieties with different amylose content were analyzed. Three different Tongil-type rice varieties and one Japonica-type rice variety were examined for their properties. Tongil-type rice varieties have longer panicles and higher rice yield (721-765 kg per 10a) than Boramchan, a Japonica-type high-yield rice variety. The protein content of the Tongil-type rice variety was higher than that of Boramchan. Japonica-type rice varieties had lower amylose content than Japonica-type rice varieties, except for Amimyeon (Milyang355). Amimyeon had higher protein content than the other varieties, and its amylose content was particularly high at 39.2%. The distribution of starch granule sizes of the four varieties was similar, and the particle size corresponding to D50 was approximately 87.8-81.9 ㎛. The pasting properties of rice flour varied among varieties. The Dasanbyeo and Hanarum2 amylogram patterns were similar. These two varieties had a higher peak viscosity (PV) and lower setback (SB) than Boramchan. In the case of Amimyeon, the hot paste viscosity (HPV), cool paste viscosity (CPV), and SB were significantly higher than those of the other Toingil-type varieties, and the breakdown (BD) was very low, showing pasting properties significantly different from that of the other varieties. The onset (To), peak (Tp), and conclusion temperature (Tc) of gelatinization of rice flour from Amimyeon were lower than those of the other tested varieties. In addition, the gelatinization temperature, measured using differnetial scanning calorimetry (DSC), and BD, measured using al rapid visco analyzer (RVA) were low in Amimyeon. Amylose content showed a high positive correlation with pasting time (PTi), HPV, and SB and a negative correlation with PV and BD.

불면증 변증도구 신뢰도와 타당도 평가 및 심리검사와의 상관성에 대한 초기연구 (A Pilot Study of Evaluating the Reliability and Validity of Pattern Identification Tool for Insomnia and Analyzing Correlation with Psychological Tests)

  • 정진형;이지윤;김주연;김시연;강위창;임정화;김보경;정인철
    • 동의신경정신과학회지
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    • 제31권1호
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    • pp.1-12
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    • 2020
  • Objectives: The purpose of this study was to evaluate the reliability and validity of the instrument on pattern identification for insomnia (PIT-Insomnia) and verify the correlation between PIT-Insomnia and psychological tests. Methods: Two evaluators examined the pattern identification of the participants who met insomnia disorder diagnostic criteria of the Diagnostic and Statistical Manual of Mental Disorder, Fifth Edition (DSM-5) and took the Insomnia Severity Index (ISI) score over 15 once manually and twice using the PIT-Insomnia to measure the inter-rater and test-retest reliability. We also conducted the following surveys: the Pittsburgh Sleep Quality Index (PSQI), the Korean version of Beck's depression inventory (K-BDI), the Korean version of the State-Trait Anxiety Inventory (STAI-K), the Korean Symptom checklist-95 (KSCL-95), and the EuroQol-5 dimension (EQ-5D), to measure concurrent validity and correlation between the PTI-Insomnia and psychological tests. Results: 1. The test-retest reliability analysis of the pattern identification results showed moderate agreement, and test-retest reliability analysis of each pattern identification score showed agreements from poor to moderate. 2. The inter-rater reliability analysis of the pattern identification results via manual showed slight agreement, when analysis was performed with calibration, the inter-rater reliability analysis of the pattern identification results via manual showed fair agreement. 3. The concordance analysis between results via manual and the PIT-Insomnia showed poor agreement, when the analysis was performed with calibration, concordance analysis showed fair agreement. 4. The concordance analysis between the PIT-Insomnia and the PSQI showed positive linear correlation. 5. The concordance analysis between the PIT-Insomnia and the PSQI, K-BDI, STAI-K, KSCL-95, and EQ-5D showed that non-interaction between the heart and kidney have positive linear correlation with the K-BDI, anxiety item of KSCL-95, dual deficiency of the heart-spleen have positive linear correlation with somatization item of KSCL-95, paranoia item of KSCL-95, heart deficiency with timidity have positive linear correlation with stress vulnerability item of KSCL-95, parania item of KSCL-95, phlegm-fire harassing the heart have positive linear correlation with K-BDI, paranoia item of KSCL-95, depressed liver qi transforming into fire have positive linear correlation with the anxiety item of KSCL-95, parania item of KSCL-95, all pattern identification have negative linear correlation with EQ-5D. Conclusions: The PIT-Insomnia has moderate agreement of reliability and reflects the severity of insomnia since it has some concurrent validity with the PSQI. There are some correlations between the PTI-Insomnia with specific psychological tests, so we could suggest it can be used appropriately in the clinical situation.

Meadow fescue의 생산성에 관한 연구 I. 영양생장기에 있어서의 형질과 건물수량과의 관계 (Studies on Productivity in Meadow Fescue ( Festuca Pratensis Huds. ) I. Relationship between morpholobical characters and dry metter yield at Vegetative Growth stage)

  • 정충섭;이주삼;윤익석
    • 한국초지조사료학회지
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    • 제4권1호
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    • pp.13-17
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    • 1983
  • 영양생장기(營養生長期)의 형태적(形態的)과 건물수량(乾物收量)과의 관계(關係)를 조사(調査)하여 수량(收量)에 관여(關與)되는 형태적(形態的) 형질(形質)과 품종(品種)의 특성(特性)을 비교(比較), 검토(檢討)하였다. 1. 개체중(건물중(乾物重))은 초장(草長), 엽면적(葉面積) 및 경면적(莖面積)과 유의(有意)한 정상관(正相關)을 나타내어, 개체중의 증가(增加)는 초장(草長), 엽면적(葉面積), 경면적(莖面積)의 상호작용(相互作用)이라고 할 수 있다. 2. 경면적(莖面積)은 건물중(乾物重)을 증가(增加)시키는 중요(重要)한 형태적(形態的) 형질(形質)의 하나라고 생각되었다. 3. 초형지수(草型指數)에 의하여 품종(品種)을 분류(分類)한 결과(結果), 경중형(莖重型)에는 M이 중간형(中間型)에는 Leto, First, Trader, 경수형(莖數型)에는 Bundy, Tammisto가 속(屬)하였다. 4. 경중형(莖重型) 품종(品種)은 초장(草長)이 낮고, 경수(莖數)가 적으나 경건(莖巾)이 두껍고 1 경중(莖重)이 무거웠으며, 경수형(莖數型) 품종(品種)은 초장(草長)이 크고 경수(莖數)는 많으나 1 경중(莖重)이 가벼운 특징(特徵)을 나타 내었다. 5. 경중형(莖重型) 품종(品種)(M)이 다수(多收)를 얻기 위해서는 경수(莖數)를 증가(增加)시키고 초장(草長)을 높게 하는 조건(條件)이 필요(必要)하다고 생각되었다.

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The New X-ray Induced Electron Emission Spectrometer

  • Yu.N.Yuryev;Park, Hyun-Min;Lee, Hwack-Ju;Kim, Ju-Hwnag;Cho, Yang-Ku;K.Yu.Pogrebitsky
    • 한국결정학회:학술대회논문집
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    • 한국결정학회 2002년도 정기총회 및 추계학술연구발표회
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    • pp.5-6
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    • 2002
  • The new spectrometer for X-ray Induced Electron Emission Spectroscopy (XIEES) .has been recently developed in KRISS in collaboration with PTI (Russia). The spectrometer allows to perform research using the XAFS, SXAFS, XANES techniques (D.C.Koningsberger and R.Prins, 1988) as well as the number of techniques from XIEES field(L.A.Bakaleinikov et all, 1992). The experiments may be carried out with registration of transmitted through the sample x-rays (to investigate bulk samples) or/and total electron yield (TEY) from the sample surface that gives the high (down to several atomic mono-layers in soft x-ray region) near surface sensitivity. The combination of these methods together give the possibility to obtain a quantitative information on elemental composition, chemical state, atomic structure for powder samples and solids, including non-crystalline materials (the long range order is not required). The optical design of spectrometer is made according to Johannesson true focusing schematics and presented on the Fig.1. Five stepping motors are used to maintain the focusing condition during the photon energy scan (crystal angle, crystal position along rail, sample goniometer rail angle, sample goniometer position along rail and sample goniometer angle relatively of rail). All movements can be done independently and simultaneously that speeds up the setting of photon energy and allows the using of crystals with different Rowland radil. At present six curved crystals with different d-values and one flat synthetic multilayer are installed on revolver-type monochromator. This arrangement allows the wide range of x-rays from 100 eV up to 25 keV to be obtained. Another 4 stepping motors set exit slit width, sample angle, channeltron position and x-ray detector position. The differential pumping allows to unite vacuum chambers of spectrometer and x-ray generator avoiding the absorption of soft x-rays on Be foil of a window and in atmosphere. Another feature of vacuum system is separation of walls of vacuum chamber (which are deformed by the atmospheric pressure) from optical elements of spectrometer. This warrantees that the optical elements are precisely positioned. The detecting system of the spectrometer consists of two proportional counters, one scintillating detector and one channeltron detector. First proportional counter can be used as I/sub 0/-detector in transmission mode or by measuring the fluorescence from exit slit edge. The last installation can be used to measure the reference data (that is necessary in XANES measurements), in this case the reference sample is installed on slit knife edge. The second proportional counter measures the intensity of x-rays transmitted through the sample. The scintillating detector is used in the same way but on the air for the hard x-rays and for alignment purposes. Total electron yield from the sample is measured by channeltron. The spectrometer is fully controlled by special software that gives the high flexibility and reliability in carrying out of the experiments. Fig.2 and fig.3 present the typical XAFS spectra measured with spectrometer.

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Berkeley Puppet Interview의 표준화를 위한 예비 연구 - 증상 척도와 부모-자녀 관계척도 (A PILOT STUDY FOR STANDARDIZATION OF BERKELEY PUPPET INTERVIEW - SYMPTOMATOLOGY & PARENT-CHILD RELATIONSHIP SCALE)

  • 신민섭;손정우;조수철;김붕년;김수경
    • Journal of the Korean Academy of Child and Adolescent Psychiatry
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    • 제14권1호
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    • pp.103-111
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    • 2003
  • 목 적:본 연구에서는 미국에서 개발된 반 구조화된 진단적 인터뷰인 Berkeley Puppet Interview(BPI)의 유용성을 검증해 보고자 하였다. BPI는 만 4세에서 7세 사이의 아동들에 대한 진단적 도구로써 신뢰도와 타당도가 높다고 보고되고 있다. 따라서 이 연구에서는 BPI의 척도(symptomatology, marital relationship, parent-child relationship, academy & social scale) 중 임상 장면과 놀이 치료 장면에서 가장 유용하게 사용될 수 있을 것으로 생각되는 증상 척도(BPI-S)와 부모자녀 관계 척도(BPI-PC)가 아동의 문제를 진단하는 평가 도구로써 신뢰롭고 타당한지를 알아보고자 하였다. 방 법:수용 언어(Receptive language)가 부진한 아동을 제외한 만 4세에서 만 7세 아동을 대상으로 하였다. 수용 언어 능력을 평가하기 위하여 PTI의 어휘와 상식 및 이해 소검사를 실시하였으며, 토끼 손 인형을 사용하여 BPI 증상 척도와 부모 자녀 척도를 아동들에게 실시하였다. BPI-S에 대한 타당도를 평가하기 위하여, K-CBCL을 환아모에게 실시하였다. 결 과:BPI-S와 BPI-PC 모두에서 chronbach's alpha=0.74와 0.86 정도의 수준을 보여 통계적으로 신뢰로운 결과를 보였다. BPI-S의 타당도는 우울, 또래에 대한 공격성 및 ADHD 부주의형을 제외한 6개의 하위 유형에서 유의미한 결과를 보였다.

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운동유발성 천식의 기관지 수축에 대한 Heparin, Cromolyn, Budesonide, Furosemide 흡입 치료의 효과 (The Protective Effect of Inhaled Heparin, Cromolyn, Budesonide, and Furosemide on Exercise-induced Asthma)

  • 이신형;심재정;이상엽;조재연;인광호;유세화;강경호
    • Tuberculosis and Respiratory Diseases
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    • 제45권6호
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    • pp.1188-1198
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    • 1998
  • 연구배경 : 운동유발성 천식은 운동후 기관지 수축을 일으키는 질환으로 기도내 열과 수분의 손실로 비만세표의 기관지 수축물질이 유리되어 발생되는 것으로 알려져 있으나 논란이 많은 실정이며 그 치료 또한 $\beta_2$-수용체 자극제 및 cromolyn을 흡입하는 것이 가장 좋다고 인정되어 왔으나 최근 운동 유발성천식의 발생기전에 기초한 여러 가지 약물의 효과가 관심의 대상이 되고 있다. 이에 저자들은 furosemide, budesonide, 헤파린 및 cromolyn의 운동유발성 천식의 예방효과를 알아보고자 본 연구를 시행하였다. 방 법 : 운동유발성 천식으로 진단받은 8명(남자 5명)을 대상으로 하였고, 대상환자들의 운동전 폐기능 검사소견은 $FEV_1$ 3.39L (93.5%), FVC 4.06L (95.1%), $FEV_1$/FVC 89.6%였고, 온도와 습도가 동일한 조건에서 운동시험을 실시하였다. 헤파린과 furosemide는 연무기를 이용하여 각각 Kg당 1,000 units와 1mg을 흡입하였고, cromolyn과 budesonide는 inhaler를 이용하여 각각 $1,000{\mu}g$$200{\mu}g$을 5일간 흡입하였으며, 약제 흡입후 운동시험와 methacholine 기관지 유발검사를 실시하였다. 결 과 : 운동후 120분 까지의 $FEV_1$의 최대 감소치는 cromolyn $86.8{\pm}6.53%$, budesonide $79.4{\pm}7.31%$. 헤파린 $83.1{\pm}4.81%$, furosemide $80.5{\pm}6.87%$로 대조군 $72.5{\pm}18.2%$에 비하여 헤파린은 통계적으로 유의하게 증가하였고(p=0.010), cromolyn, furosemide와 budesonide는 통계적 유의성은 없었으나(p>0.05) 모두 대조군에 비하여 증가된 결과를 보였다. 4가지 약제의 $FEV_1$의 최대 감소치에 대한 다중 비교에서는 통계적으로 유의한 차이가 없었으며(p>0.05) 수치적으로는 헤파린이 가장 증가된 결과를 보였다. 헤파린 흡입 3일째에 측정한 aPTT는 흡입전과 차이가 없었다.(p>0.05) 약제 흡입후 methacholine 기관지 유발검사의 $PD_{20}$은 cromolyn $2.19{\pm}0.89$, budesonide $3.38{\pm}1.77$, heparin $4.17{\pm}96$, furosemide $1.85{\pm}0.86$으로 대조군 $1.58{\pm}0.49$에 비하여 각각 유의한 차이가 없었다.(p>0.05) 결 론 : 이상의 결과로 운동유발성 천식환자에서 운동전 헤파린 흡입으로 운동후 기관지수축을 예방할 수 있으며 cromolyn은 용량 및 투여기간에 대한 연구가 더 필요할 것으로 판단된다. 또한 furosemide와 budesonide의 흡입은 통계적 유의성은 없었으나 어느정도의 효과를 나타낼수 있는 것으로 보여 향후 더 많은 환자를 대상으로 한 연구가 필요할 것으로 사료된다.

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