• 농약과학회지
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• 제14권4호
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• pp.407-414
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• 2010

한국의 여러 지역에서 수집 분리 동정한 Bacillus subtilis의 토마토, 고추에 대한생육촉진 및 병 저항성 활성을 평가하였다. 선발된 B. subtillis JE 21-1 와 JE8-1 균주는 토마토 및 고추의 생육을 크게 증진 시켰다. B. subtillis JE21 균주 처리는 무처리 혹은 0.1 mm BTH 처리와 비교하여 고추와 토마토의 초장, 잎의 크기 등 생육을 촉진하고 고추 탄저병의 발생을 억제시켰다. ES2-1 균주는 고추 근권에 정착력이 우수하며 $1.2{\times}10^5cfu/g$ root의 밀도를 나타내었다. 생육촉진은 과실의 크기와 무게로 평가하였는데 JE9-4, ES2-2 균주를 처리하였을 때 과실크기가 향상되었고, JE 3-6, ES4-2, ES2-2 및 JE 21-2를 처리하였을 때 고추과실의 무게가 높았다. PR1a::GUS 유전자 함유 담배(Xanthi nc)에 선발된 바실러스균을 선 정착시키고 무름병균인 Pectobacterium carotovornm SCC를 접종하여 병 저항성 발현을 조사한 결과 JE9-4의 PRI::GUS 발현량이 가장 많았다.

• Tuberculosis and Respiratory Diseases
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• 제58권1호
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• pp.54-58
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• 2005

연구 배경 : 비소세포 폐암의 암화 과정에서 에스트로겐과 프로제스테론 단백의 역할에 대한 면역조직화학 염색을 이용한 연구들이 진행 중이다. 그러나 이 연구들은 아직 일치된 결과를 보이고 있지 않으며 이는 상용하는 면역조직화학 염색법이 한 문제로 제시되고 있다. 저자 들은 최근 새로 개발된 조직미세배열법을 이용하여 비소세포 폐암 환자의 조직에서 이들 호르몬 수용체 발현을 연구하였다. 대상 및 방법 : 대상은 70예의 비소세포 폐암 환자로 남성이 74%, 여성이 26%이었다. 이들의 포르말린 고정, 파라핀 포매조직을 이용하여 조직미세배열을 구축하였다. 가열을 통한 항체 재생 후에 폐암 조직에서 일차 단일클론 항체 (ER1D5와 PR1A6)를 이용한 면역조직화학 염색을 시행하였다. 결 과 : 흡연력은 현재 흡연자가 49%이었고, 비흡연자와 금연자는 각각 27%와 24%이었다. 폐암의 조직학적 분류는 편평상피세포암이 34예이었고, 선암, 편평상피선암, 기타 세포형은 각각 24예, 9예와 3예이었다. 단일클론 항체를 이용한 염색에서 양성 결과를 보이는 비소세포 폐암 세포는 관찰되지 않았다. 결 론 : 미세조직배열법을 이용한 에스트로겐과 프로제스테론 수용체 연구는 모든 비소세포 폐암 조직에서 음성 결과를 보였다. 현재 면역조직화학 염색에 사용되는 호르몬 수용체가 비소세포 폐암 조직에서 발현이 되지 않을 가능성을 시사해주는 소견으로 향후 적절한 항체들을 이용한 추가적인 연구가 필요하겠다.

• Molecules and Cells
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• 제25권4호
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• pp.559-565
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• 2008

Members of the TGA family of basic domain/leucine zipper transcription factors regulate defense genes through physical interaction with NON-EXPRESSOR OF PR1 (NPR1). Of the seven TGA family members, TGA4/octopine synthase (ocs)-element-binding factor 4 (OBF4) is the least understood. Here we present evidence for a novel function of OBF4 as a regulator of flowering. We identified CONSTANS (CO), a positive regulator of floral induction, as an OBF4-interacting protein, in a yeast two-hybrid library screen. OBF4 interacts with the B-box region of CO. The abundance of OBF4 mRNA cycles with a 24 h rhythm under both long-day (LD) and short-day (SD) conditions, with significantly higher levels during the night than during the day. Electrophoretic mobility shift assays revealed that OBF4 binds to the promoter of the FLOWERING LOCUS T (FT) gene, a direct target of CO. We also found that, like CO and FT, an OBF4:GUS construct was prominently expressed in the vascular tissues of leaf, indicating that OBF4 can regulate FT expression through the formation of a protein complex with CO. Taken together, our results suggest that OBF4 may act as a link between defense responses and flowering.

• 생명과학회지
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• 제25권11호
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• pp.1214-1222
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• 2015

본 연구는 난소 제거 수술을 시행하여 폐경기를 유도시킨 뒤 고지방 식이를 섭취한 쥐에게서 나타난 신체 변화에 있어 운동과 갈근/지황 섭취에 의한 개선 효과를 관찰하고, 그러한 효과가 골격근에서의 후성 유전적 발현 변화에 의한 것임을 규명하고자 하였다. 8주령의 쥐(rat, n=60)의 난소를 제거한 뒤 고지방 식이를 유도하면서 트레드밀 운동(exercise)을 실시하는 그룹과 비운동(sedentary) 그룹으로 나누었다. 두 그룹을 각각 estradiol, 갈근과 지황의 3:1 복합물(HT051), 그리고 물 섭취 군으로 다시 나누어 총 8주간 경구 투여를 함께 실시하였다. 그 결과 운동 그룹과 갈근/지황 섭취 그룹에서 체중이 유의하게 감소하였고, 가자미근과 족저근의 근질량 또한 운동 그룹과 갈근/지황 섭취 그룹에서 유의하게 증가하였다. 한편, 가자미근에서 물을 섭취하며 운동하지 않은 그룹의 H3K9 아세틸화가 억제 되었고 H3K9의 메틸화에는 변화가 없었다. 족저근의 경우 운동 그룹에서 H3K9 아세틸화가 현저하게 눈에 띄었고, 반대로 메틸화는 줄어든 것이 관찰되었다. 나아가 H3K9의 아세틸화와 메틸화를 조절하는 대표적인 효소 중 HDAC4, HDAC5, G9a 유전자의 mRNA 발현양을 정량한 결과, 가자미근에서는 모두 유의한 차이가 없었고 족저근에서 운동 한 그룹의 HDAC5와 G9a 유전자의 mRNA 발현양이 유의하게 감소하였지만 HDAC4의 mRNA는 차이가 없었다. 또한 운동과 갈근/지황의 상호작용 효과는 나타나지 않았다. 본 연구를 통하여 운동과 갈근/지황 섭취가 체중 감소, 근질량 증가에 영향을 미치고, 이러한 현상은 히스톤 H3K9 부분의 아세틸화와 메틸화에 의한 유전자 발현 조절이 그 기전으로 작용한다는 것을 알 수 있었다.

• The Korean Journal of Physiology and Pharmacology
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• 제12권4호
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• pp.205-209
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• 2008

Recently, Sun et al (2008) reported that the IL6R polymorphism is associated with schizophrenia. Therefore, to detect the association between polymorphisms of interleukin 31 receptor A (IL31RA) and schizophrenia, we genotyped 9 SNPs [rs9292101 (intron 1), rs1009639 (exon 2, Pr043Pro), rs2161582 (intron 2), rs68761890 (intron 5), rs16884629 (intron 6), rs11956465 (intron 12), rs12153724 (intron 12), and rs16884641 (intron 14)] using the Golden Gate assay on Illumina BeadStation 500 GX. Two hundred eighteen patients with schizophrenia and 379 normal subjects were recruited. Patients with schizophrenia were diagnosed according to DSM-IV, and control subjects without history of psychiatric disorders were selected. We used SNPStats, Haploview, HapAnalyzer, SNPAnalyzer, and Helixtree programs for the evaluation of genetic data. Of nine polymorphisms, three SNPs (rs9292101, rs1009639, and rs11956465) were associated with schizophrenia. The rs9292101 and rs11956465 showed significant associations with the risk of schizophrenia in the codominant [rs9292101, odds ratio (OR)=0.74, 95% confidence interval (CI)=0.58${\sim}$0.95, p=0.017] and recessive (rs11956465, OR=0.64, 95% CI=0.42${\sim}$0.96, p=0.034) models, respectively. The rs1009639 also was statistically related to schizophrenia in both codominant (OR=0.76, 95% CI=0.60${\sim}$0.97, p=0.025) and dominant (OR=0.66, 95% CI=0.44${\sim}$0.98, p=0.035) models. Two linkage disequilibrium (LD) blocks were made. In the analysis of haplotypes, a haplotype (GCT) in block 1 and a haplotype (CCACAG) in block 2 showed significant associations between schizophrenia and control groups (haplotype GCT, frequency=0.509, chi square=4.199, p=0.040; haplotype CCACAG, frequency=0.289, chi square=5.691, p=0.017). The results suggest that IL31RA may be associated with risk of schizophrenia in Korean population.

• Asian Pacific Journal of Cancer Prevention
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• 제17권1호
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• pp.249-254
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• 2016

Molecular detection methods such as RT-PCR for detecting breast cancer-associated gene expression in the peripheral blood have the potential to modify breast cancer (BC) staging and therapy. In this regard, we evaluated the potential of erb-B2 molecular marker in BC detection and analyzed the expression of erb-B2 mRNA in the peripheral blood and fresh tissue samples of 50 pretreated female BC patients and 50 healthy females by reverse transcription-PCR (RT-PCR) method. We also assessed the correlation of erb-B2 mRNA marker positivity in peripheral blood and tumor tissue samples with clinical and pathological factors in BC patients in order to evaluate its prognostic value. It was shown that there is a significant difference between healthy females and BC patients with expression of the erb-B2 molecular marker (p<0.01). A significant difference between the expression of erb-B2 in the peripheral blood and tissue samples of BC patients (p<0.01) and the frequency of circulating erb-B2 mRNA expression in peripheral blood and in tissue was detected by RT-PCR. No correlation was found between erb-B2 mRNA expression in blood or tumor tissue samples and lymph node, tumor grade, tumor stage, tumor size, patient's age, ki67, estrogen receptor (ER), progesterone receptor (PGR), P53, and HER-2 status. However, in a small subset of 31 BC patients we found that expression of erb-B2 in peripheral blood or in both peripheral blood and tumor tissue was directly correlated with lympho-vascular invasion and perineural invasion as poor prognostic features. The highest rates of erb-B2 expression in peripheral blood or tumor tissue were in the ER and PR negative and HER-2 positive group. This study suggests that the application of the RT-PCR and immunohistochemical methods for erb-B2 molecular marker detection would provide a higher detection rate, especially in early stage BC.

• Biomolecules & Therapeutics
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• 제22권4호
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• pp.347-354
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• 2014

Larrea nitida is a plant that belongs to the Zygophyllaceae family and is widely used in South America to treat inflammatory diseases, tumors and menstrual pain. However, its pharmacological activity remains unclear. In this study we evaluated the property of selective estrogen receptor modulator (SERM) of Larrea nitida extracts (LNE) as a phytoestrogen that can mimic, modulate or disrupt the actions of endogenous estrogens, depending on the tissue and relative amount of other SERMs. To investigate the property of SERM of LNE, we performed MCF-7 cell proliferation assays, estrogen response element (ERE)-luciferase reporter gene assay, human estrogen receptor (hER) binding assays and in vivo uterotrophic assay. To gain insight into the active principles, we performed a bioassay-guided analysis of LNE employing solvents of various polarities and using classical column chromatography, which yielded 16 fractions (LNs). LNE showed high binding affinities for $hER{\alpha}$ and $hER{\beta}$ with $IC_{50}$ values of $1.20{\times}10^{-7}$ g/ml and $1.00{\times}10^{-7}$ g/ml, respectively. LNE induced $17{\beta}$-estradiol (E2)-induced MCF-7 cell proliferation, however, it reduced the proliferation in the presence of E2. Furthermore, LNE had an atrophic effect in the uterus of immature rats through reducing the expression level of progesterone receptor (PR) proteins. LN08 and LN10 had more potent affinities for binding on $hER{\alpha}$ and ${\beta}$ than other fractions. Our results indicate that LNE had higher binding affinities for $hER{\beta}$ than $hER{\alpha}$, and showed SERM properties in MCF-7 breast cancer cells and the rat uterus. LNE may be useful for the treatment of estrogen-related conditions, such as female cancers and menopause.

• 한국자원식물학회지
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• 제26권2호
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• pp.320-327
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• 2013

활용가치가 높은 부존식물자원인 갈대의 기내 번식을 통한 배양체계를 확립하고 재분화 식물체들의 유전적 다양성을 검토한 결과, 성숙종자 유래의 캘러스를 통한 기내 식물체 재분화는 N6배지에서 MS배지보다 양호하였고, 0.25~0.5 mg/L의 BA를 포함한 N6배지에서 가장 높았다. ISSR 마커를 이용하여 재분화 식물체의 유전적 안정성을 분석한 결과, 검출된 총 94 유전좌중 유전적 다형성은 17%였고, 평균 유전자다양도 값(h)은 0.03, BA 5 mg/L를 포함한 N6배지에서 0.008, NAA 0.1 mg/L와 kinetin 2 mg/L를 포함한 MS 배지에서 0.040으로 나타났다. 이것은 재분화된 갈대식물체 개체간에 유전적으로 구조가 매우 단순하고 균일하며, 유전적 다양성 진단에 ISSR 마커가 효과적임을 시사한다.

• The Plant Pathology Journal
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• 제30권4호
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• pp.343-354
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• 2014

Rice blast disease caused by Magnaporthe oryzae is one of the most serious diseases of cultivated rice (Oryza sativa L.) in most rice-growing regions of the world. In order to investigate early response genes in rice, we utilized the transcriptome analysis approach using a 300 K tilling microarray to rice leaves infected with compatible and incompatible M. oryzae strains. Prior to the microarray experiment, total RNA was validated by measuring the differential expression of rice defense-related marker genes (chitinase 2, barwin, PBZ1, and PR-10) by RT-PCR, and phytoalexins (sakuranetin and momilactone A) with HPLC. Microarray analysis revealed that 231 genes were up-regulated (>2 fold change, p < 0.05) in the incompatible interaction compared to the compatible one. Highly expressed genes were functionally characterized into metabolic processes and oxidation-reduction categories. The oxidative stress response was induced in both early and later infection stages. Biotic stress overview from MapMan analysis revealed that the phytohormone ethylene as well as signaling molecules jasmonic acid and salicylic acid is important for defense gene regulation. WRKY and Myb transcription factors were also involved in signal transduction processes. Additionally, receptor-like kinases were more likely associated with the defense response, and their expression patterns were validated by RT-PCR. Our results suggest that candidate genes, including receptor-like protein kinases, may play a key role in disease resistance against M. oryzae attack.

• 한국자원식물학회:학술대회논문집
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• 한국자원식물학회 2022년도 추계학술대회
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• pp.36-36
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• 2022

The molecular understanding of resistance and susceptibility of host plants to scab, a most threatful disease to pome fruit production worldwide, is very limited. Comparing resistant line '93-3-98' to susceptible one 'Sweet Skin' at seven time points of 0, 0.5, 1, 2, 3, 4, 8 days post inoculation, RNA-sequencing data derived from infected and mock-inoculated young leaves were analyzed to evaluate the tolerant response and to mine candidate genes of pear to the scab pathogen Venturia nashicola. Analysis of the mapped reads showed that the infection of V. nashicola led to significant differential expression of 17,827 transcripts with more than 3-fold change in the seven pairs of libraries, of which 9,672 (54%) are up- and 8,155(46%) are down-regulated. These included mainly receptor (NB-ARC domains-containing, CC-NBS-LRR, TIR-NBS-LRR, seven transmembrane MLO family protein) and transcription factor (ethylene responsive element binding, WRKY DNA-binding protein) related gene. An arsenal of defense response of highly resistant pear accessions derived from European pear was probably supposed no sooner had V. nashicola infected its host than host genes related to disease suppression like Polyketide cyclase/dehydrase and lipid transport protein, WRKY family transcription factor, lectin protein kinase, cystein-rich RLK, calcium-dependent phospholipid-binding copine protein were greatly boosted and eradicated cascade reaction induced by pathogen within 24 hours. To identify transcripts specifically expressed in response to V. nashicola, RT-PCRs were conducted and compare to the expression patterns of seven cultivars with a range of highly resistant to highly susceptible symptom. A DEG belonging to the PR protein family genes that were higher expressed in response to V. nashicola suggesting extraordinary role in the resistance response were led to the identification. This study provides the first transcriptional profile by RNA-seq of the host plant during scab disease and insights into the response of tolerant pear plants to V. nashicola.