• Asian-Australasian Journal of Animal Sciences
• /
• v.25 no.3
• /
• pp.299-303
• /
• 2012

Inbreeding is the mating of relatives that produce progeny having more homozygous alleles than non-inbred animals. Inbreeding increases numbers of recessive alleles, which is often associated with decreased performance known as inbreeding depression. The magnitude of inbreeding depression depends on the level of inbreeding in the animal. Level of inbreeding is expressed by the inbreeding coefficient. One breeding goal in livestock is uniform productivity while maintaining acceptable inbreeding levels, especially keeping inbreeding less than 20%. However, in closed herds without the introduction of new genetic sources high levels of inbreeding over time are unavoidable. One method that increases selection response and minimizes inbreeding is selection of individuals by weighting estimated breeding values with average relationships among individuals. Optimum genetic contribution theory (OGC) uses relationships among individuals as weighting factors. The algorithm is as follows: i) Identify the individual having the best EBV; ii) Calculate average relationships ($\bar{r_j}$) between selected and candidates; iii) Select the individual having the best EBV adjusted for average relationships using the weighting factor k, $EBV^*=EBV_j(1-k\bar{{r}_j})$ Repeat process until the number of individuals selected equals number required. The objective of this study was to compare simulated results based on OGC selection under different conditions over 30 generations. Individuals (n = 110) were generated for the base population with pseudo random numbers of N~ (0, 3), ten were assumed male, and the remainder female. Each male was mated to ten females, and every female was assumed to have 5 progeny resulting in 500 individuals in the following generation. Results showed the OGC algorithm effectively controlled inbreeding and maintained consistent increases in selection response. Difference in breeding values between selection with OGC algorithm and by EBV only was 8%, however, rate of inbreeding was controlled by 47% after 20 generation. These results indicate that the OGC algorithm can be used effectively in long-term selection programs.

• The Korean Journal of Malacology
• /
• v.31 no.4
• /
• pp.257-262
• /
• 2015

The seven selected primers BION-13, BION-29, BION-61, BION-64, BION-68, BION-72 and BION-80 generated the total number of loci, average number of loci per lane and specific loci in Meretrix lusoria (ML), Saxidomus purpuratus (SP) and Cyclina sinensis (CS) species. Here, the complexity of the banding patterns varied dramatically between the primers from the three venerid clam species. The higher fragment sizes (> 1,000 bp) are much more observed in the SP species. The primer BION-68 generated 21 unique loci to each species, which were ascertaining each species, approximately 150 bp, 300 bp and 450 bp, in the ML species. Remarkably, the primer BION-80 detected 7 shared loci by the three clam species, major and/or minor fragments of sizes 500 bp, which were matching in all samples. As regards average bandsharing value (BS) results, individuals from CS clam species (0.754) exhibited higher bandsharing values than did individuals from SP clam species (0.607) (P < 0.05). In this study, the dendrogram obtained by the seven oligonucleotides primers indicates three genetic clusters: cluster 1 (LUSORIA01-LUSORIA07), cluster 2 (PURPURATUS08-PURPURATUS14), cluster 3 (SINENSIS15-SINENSIS21). Among the twenty one venerid clams, the shortest genetic distance that displayed significant molecular differences was between individuals 18 and 20 from the CS species (genetic distance = 0.071), while the longest genetic distance among the twenty-one individuals that displayed significant molecular differences was between individuals LUSORIA no. 02 and PURPURATUS no. 09 (genetic distance = 0.778). Relatively, individuals of SP venerid species were appropriately closely related to that of CS species, as shown in the hierarchical dendrogram of genetic distances. Eventually, PCR fragments exposed in the present study may be worthwhile as a DNA marker the three venerid clam species to discriminate.

• Journal of Forest and Environmental Science
• /
• v.30 no.1
• /
• pp.161-166
• /
• 2014

To provide basic information for wildlife management, we investigated the distribution and ecology of wild mice in Mt. Keumwon recreational forests. The trapped wild mice were a total of 4 species such as Eothenomys regulus, Apodemus speciosus peninsulae, Apodemus agarius, and Crocidura suaveolens. A total of 79 individuals from four species were trapped. Number of Eothenomys regulus was the highest as 41 individuals followed by Apodemus speciosus peninsulae of 31 individuals, Apodemus agarius of 4 individuals, and Crocidura suaveolens of 4 individuals. Depending on forest type, 51 individuals were captured in broad-leaved forests, whereas 28 individuals were captured in coniferous forests. Average weight of the trapped Eothenomys regulus, Apodemus speciosus peninsulae, Apodemus agarius, and Crocidura suaveolens was 37.13 g, 36.29 g, 31.25 g, and 15 g, respectively. Among the trapped wild mice, vole which has the largest head and ears were Eothenomys regulus and vole which has the longest tail was Apodemus speciosus peninsulae and Apodemus agarius (p<0.5). This study might be valuable to control and predict some damages related to wild mice in Mt. Keumwon for protecting forest trees.

• Tuberculosis and Respiratory Diseases
• /
• v.83 no.1
• /
• pp.61-70
• /
• 2020

Background: Circulating tumor cells (CTCs) are frequently detected in patients with advanced-stage malignant tumors and could act as a predictor of poor prognosis. However, there is a paucity of data on the relationship between CTC number and primary tumor volume in patients with lung cancer. Therefore, our study aimed to evaluate the relationship between CTC number and primary tumor volume in patients with lung adenocarcinoma. Methods: We collected blood samples from 21 patients with treatment-naive lung adenocarcinoma and 73 healthy individuals. To count CTCs, we used a CTC enrichment method based on fluid-assisted separation technology. We compared CTC numbers between lung adenocarcinoma patients and healthy individuals using propensity score matching, and performed linear regression analysis to analyze the relationship between CTC number and primary tumor volume in lung adenocarcinoma patients. Results: CTC positivity was significantly more common in lung adenocarcinoma patients than in healthy individuals (p<0.001). The median primary tumor volume in CTC-negative and CTC-positive patients was 10.0 ㎤ and 64.8 ㎤, respectively. Multiple linear regression analysis showed that the number of CTCs correlated with primary tumor volume in lung adenocarcinoma patients (β=0.903, p=0.002). Further subgroup analysis showed a correlation between CTC number and primary tumor volume in patients with distant (p=0.024) and extra-thoracic (p=0.033) metastasis (not in patients with distant metastasis). Conclusion: Our study showed that CTC numbers may be associated with primary tumor volume in lung adenocarcinomas patients, especially in those with distant metastasis.

• Korean Journal of Ichthyology
• /
• v.28 no.4
• /
• pp.273-278
• /
• 2016

The seasonal variations in species composition and abundance of the fish assemblage were studied in the rocky subtidal habitat around the Jam-do, Jinhae. Fish samples were collected monthly from September 2007 to July 2008 using a pot. During study, a total of 48 fish species belonging to 24 families were collected. The dominant species were Sebastes longispinis, Pseudoblennius cottoides, Sebastes inermis, Rudarius ercodes, Ditrema temminckii, Ernogrammus hexagrammus, which accounted for 71.0% of the total number of individuals collected. The number of species, number of individuals, biomass and diversity greatly fluctuated showing a peak in the number of species, number of individuals and species diversity in autumn, whereas the biomass was the highest in spring. Abundance of dominant species varied with season. S. longispinis was abundant during spring and summer, while the abundance of P. cottoides was higher during autumn and spring. S. inermis occurred with high number in September, December and May, whereas R. ercodes occurred exclusively during autumn.

• 한국균학회소식:학술대회논문집
• /
• 2014.05a
• /
• pp.19-19
• /
• 2014

This study included the analysis of mushroom data collected from Mt. Chiak in Gangwon-do using various methods. Former studies of Korean mushrooms are limited by regional characters and there is less species diversity among the regions. This study tried to find a way for the forecast of mushroom distribution and appearance by indexes of species diversity. The indexes used in this study include the number of fungi (N), the number of species (S), similarity index (C), richness index (R1, R2), variety index (V1, V2), evenness index (E1, E2, E3, E4, E5), and dominance index (D1) to analyze variety of species diversity. Analyses of data of fungi using a multistage cluster sampling indicate that the average value of C for years was higher than the average value of C for areas. The mushrooms consisted of 208 species in 686 individuals in limited fungal collection from 2002 to 2003. One hundred thirty nine species in 393 individuals were collected in 2002, and 122 species 293 individuals were collected in 2003. The individuals collected in 2003 were smaller than 2002's individuals. Similarity, richness, and variety indexes' values of 2003 were reduced than 2002's values but dominance index of 2003 was increased than 2002's value. Generally the species diversity of the environment to evaluate the index of similarity, richness, and variety was a higher index; dominance index was lower than that of the surrounding environment, suggesting a good diversity. As a result, the occurrence of mushrooms in the surrounding environment and the various factors seem fell in 2002 compared to 2003. The majority genus of the limited fungal collection was Mycena genus in 63 individuals; the majority species was Laccaria laccata in 34 individuals. Ninety three species in 106 individuals were collected by the extended collection and the majority genus of the extended collection was Amanita genus in 17 individuals; the majority species was Amanita citrina (Schaeff.) Pers. which was found in 5 individuals. This demonstrates that periodical similarity's value was 0.159 is higher than special similarity's 0.119. This indicates that the probability of the appearance of same mushrooms in the same area in following year is higher than the probability of the appearance of same mushrooms in the surrounding area in same year. The value of coefficient of variation (CV), in which the amount of change is much or less by N is higher than the CV value by S. CV value of dominance index(D) was the highest r point among other indexes, and evenness index (E) was the lowest point among other indexes. The correlation matrix with 66 combinations between the indexes, the combinations with correlations was 46 combinations. These results revealed that indexes of R1, V2, and E1 were proper to represent species diversity of fungi based on the correlation matrix and the theory of statistical independence which means there is no or less mutual association. This research would contribute to the study about variable living creature by measuring method and in the future this would be used to figure out regulation about fungi with their correlation, values in ecosystem, develop improving new models about agricultural fungi species and numbers by investigating agricultural variable species.

• Korean Journal of Environment and Ecology
• /
• v.21 no.6
• /
• pp.461-467
• /
• 2007

The research on food habits of the Fire-bellied toad, Bombina orientalis, distributed in Korea was done targeting a total of 487 individuals in 4 inland areas and 8 areas of Jeju island from April 1990 to September 1992. The survey results showed that there was no difference In the number of the preys of the Korean Fire-bellied per individual between the inland areas and Jeju island and the toad preyed on 1 to 3 individuals on an average, but there happened a case where some Fire-bellied toads in Jeju preyed on as much as 94 individuals. There were 13 orders surveyed in the kinds of prey of the Fire-bellied toad inland, and 10 in Jeju island with a high predation frequency and the number of the preyed individuals of Coleoptera and Hymenoptera. The predation frequency of the two populations was similar in terms of prey taxa, but there appealed a different aspect in the number of the individuals by prey taxa. In short, the inland population of Fire-bellied toad was found to eat more various sorts of preys, not satisfied with limited sorts of preys in comparison with the Jeju toad. There appeared a difference in eating habits by month between the two populations; the feeding duration of the inland population was from May to October, but the Jeju population was from April to September. Among the kinds of prey taxa, Coleoptera and Hymenoptera were equally distributed to the two populations of Korean Fire-bellied toad for this research purpose during the survey period. The number of orders, predation frequency and the number of the prey taxa by one population prey were rather higher in the summer. Therefore, it is concluded that the most active period of predation of the Korean Fire-bellied toad is summer.

• Journal of Information Technology Applications and Management
• /
• v.28 no.1
• /
• pp.33-41
• /
• 2021

In this study, we estimated the number of secondary COVID-19 infections caused by students with potential transmission potential home. When the existing Monte Carlo method was applied to Korean data, the average number of household members of the second COVID-19 infected was predicted. The summary of this study is as follows. First, in general, the number of secondary infections by students returning home from school is greatly influenced by the virus infection rate of each student group they contact while returning home from school. Korea-based empirical research on this is needed. Second, the number of secondary infections by Korean students was relatively lower than that of previous studies. This can be interpreted as being due to the domestic furniture structure. Third, unlike previous studies that assumed the distribution of secondary infected individuals as normal distribution, assuming a negative binomial distribution, the number of secondary infected individuals was sensitively changed according to the estimated parameters. Interpretation of this result shows that the number of secondary infections may vary depending on the time of decision making, the target region, and the target student group. Finally, according to the results of this analysis, a proposal was made to support education policy decisions.

• Fashion & Textile Research Journal
• /
• v.11 no.6
• /
• pp.942-946
• /
• 2009

The trends of patents related to natural dyeing were examined in order to guide the development of natural dyeing into a high value-added technology. Total 181 patents data provided from KISTI were analyzed and following results were drawn. Korea had the overwhelming number of patents related to natural dyeing over Japan or United States of America from 1970 to 2007. In case of domestic, the number of patent applications were heavily focused on the metropolitan area in 1990's, but started to increase in the Honam region and Youngnam region in the first half of the year 2000 which indicated that the researches and the developments of natural dyeing were very active. In the case of foreign countries, most of their patent applications comes from the corporation such as a company while the number of patents applications from individuals overwhelms that of corporation in South Korea. Also, more of individuals' patent applications were denied than corporations' patents applications. The vegetable dye, a type of dyestuff which is a research subject for patent application, had the most research done above all other dyestuff.

• Journal of applied mathematics & informatics
• /
• v.28 no.5_6
• /
• pp.1073-1088
• /
• 2010

In this article we want to formulate a disease transmission model, MSEIR model, for a population with individuals travelling between patches i and i + 1 and we derive an explicit formula for the basic reproductive number, $R_0$, employing the spectral radius of the next generation operator. Also, in this article we show that a system of ordinary differential equations for this model has a unique disease-free equilibrium and it is locally asymptotically stable if $R_0$ < 1 and unstable if $R_0$ > 1.