• Title/Summary/Keyword: Mass Distribution

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Theoretical Peptide Mass Distribution in the Non-Redundant Protein Database of the NCBI

  • Lim Da-Jeong;Oh Hee-Seok;Kim Hee-Bal
    • Genomics & Informatics
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    • v.4 no.2
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    • pp.65-70
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    • 2006
  • Peptide mass mapping is the matching of experimentally generated peptides masses with the predicted masses of digested proteins contained in a database. To identify proteins by matching their constituent fragment masses to the theoretical peptide masses generated from a protein database, the peptide mass fingerprinting technique is used for the protein identification. Thus, it is important to know the theoretical mass distribution of the database. However, few researches have reported the peptide mass distribution of a database. We analyzed the peptide mass distribution of non-redundant protein sequence database in the NCBI after digestion with 15 different types of enzymes. In order to characterize the peptide mass distribution with different digestion enzymes, a power law distribution (Zipfs law) was applied to the distribution. After constructing simulated digestion of a protein database, rank-frequency plot of peptide fragments was applied to generalize a Zipfs law curve for all enzymes. As a result, our data appear to fit Zipfs law with statistically significant parameter values.

Factorization of the Jet Mass Distribution in the Small R Limit

  • Idilbi, Ahmad;Kim, Chul
    • Journal of the Korean Physical Society
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    • v.73 no.9
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    • pp.1230-1239
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    • 2018
  • We derive a factorization theorem for the jet mass distribution with a given $p^J_T$ for the inclusive production, where $p^J_T$ is a large jet transverse momentum. Considering the small jet radius limit ($R{\ll}1$), we factorize the scattering cross section into a partonic cross section, the fragmentation function to a jet, and the jet mass distribution function. The decoupled jet mass distributions for quark and gluon jets are well-normalized and scale invariant, and they can be extracted from the ratio of two scattering cross sections such as $d{\sigma}/(dp^J_TdM^2_J)$ and $d{\sigma}/dp^J_T $. When $M_J{\sim}p^J_TR$, the perturbative series expansion for the jet mass distributions works well. As the jet mass becomes small, large logarithms of $M_J/(p^J_TR)$ appear, and they can be systematically resummed through a more refined factorization theorem for the jet mass distribution.

Distribution of Baryonic Matter in Dark Matter Halos: Effect of Dynamical Friction

  • Bae, Yeong-Bok;Lee, Hyung-Mok
    • The Bulletin of The Korean Astronomical Society
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    • v.36 no.1
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    • pp.47.1-47.1
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    • 2011
  • We studied the evolution of the two mass components system with NFW initial density distribution by direct integration of the Fokker-Planck equations. The low mass component is regarded the dark matter particles while the high mass component is assumed to be conglomerates of baryonic matter in order to depict the 'stars'. While the true mass ratio between these two types of particles should be extremely large, our adopted mass ratio is about 1000 beyond which the dynamical evolution and density distribution tend to converge. Since the dynamical evolution is dominated by the dynamical friction, the high mass component slowly moves toward the central part, and eventually undergoes the core collapse. The system reaches the core-collapse at about $7.1{\times}10^{-3}$ $t_{fh}$ in NFW models, where $t_{fh}$is the dynamical friction time at half-mass radius. The distribution of the high mass component is well fitted by the Sersic profiles or modified Hubble profile when the mass segregation is established. From these results, the surface brightness of elliptical galaxies may be explained by the high mass component experiencing dynamical friction by the dark matter particles. In order for the mass segregation to be effective within Hubble time, the mass of the luminous component should be greater than $10^5M_{\bigodot}$.

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Advances and Applications of Mass Spectrometry Imaging in Neuroscience: An Overview

  • Bharath S. Kumar
    • Mass Spectrometry Letters
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    • v.14 no.3
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    • pp.57-78
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    • 2023
  • Understanding the chemical composition of the brain helps researchers comprehend various neurological processes effectively. Understanding of the fundamental pathological processes that underpin many neurodegenerative disorders has recently advanced thanks to the advent of innovative bioanalytical techniques that allow high sensitivity and specificity with chemical imaging at high resolution in tissues and cells. Mass spectrometry imaging [MSI] has become more common in biomedical research to map the spatial distribution of biomolecules in situ. The technique enables complete and untargeted delineation of the in-situ distribution characteristics of proteins, metabolites, lipids, and peptides. MSI's superior molecular specificity gives it a significant edge over traditional histochemical methods. Recent years have seen a significant increase in MSI, which is capable of simultaneously mapping the distribution of thousands of biomolecules in the tissue specimen at a high resolution and is otherwise beyond the scope of other molecular imaging techniques. This review aims to acquaint the reader with the MSI experimental workflow, significant recent advancements, and implementations of MSI techniques in visualizing the anatomical distribution of neurochemicals in the human brain in relation to various neurogenerative diseases.

THE MASS DISTRIBUTION IN THE VICINITY OF THE GALACTIC CENTER

  • MCGREGOR PETER J.
    • Journal of The Korean Astronomical Society
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    • v.29 no.spc1
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    • pp.119-122
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    • 1996
  • The case for a massive black hole in the center of the Galaxy is reassessed using improved modeling techniques and observational data. A dark mass of ${\~}{\times} 10^6$ Mo is present within 0.2 pc of the Galactic center. However, the available data can be modeled, without appealing to a massive black hole, using an extended distribution of dark stellar remnants (neutron stars and stellar mass black holes) provided that the stellar initial mass function in the central parsec is deficient in stars less massive than $\~$1 Mo. Such a situation may be a natural consequence of repeated gas build-up followed by starbursts in the central region. A clear distinction between this and the massive central black hole model cannot be made using red giant tracers outside 0.2 pc due to uncertainties in the radial velocity dispersion distribution. The cluster of massive early-type emission-line stars in the central parcsec more effectively probe the mass distribution close to Sgr A $\ast$, but their small number and partial rotational support complicate mass determinations. Proper motion determinations for stars within 0.5' of Sgr A$\ast$ may be the most effective means of unambiguously determining the mass distribution in the immediate vicinity of the Galactic center.

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A study on the effects of vertical mass irregularity on seismic performance of tunnel-form structural system

  • Mohsenian, Vahid;Nikkhoo, Ali
    • Advances in concrete construction
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    • v.7 no.3
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    • pp.131-141
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    • 2019
  • Irregular distribution of mass in elevation is regarded as a structural irregularity by which the modes with high energy levels are excited and in addition, it can lead the structure to withstanding concentration of nonlinear deformations and consequently, suffer from unpredictable local or global damages. Accordingly, with respect to the lack of knowledge and insight towards the performance of concrete buildings making use of tunnel-form structural system in seismic events, it is of utmost significance to assess seismic vulnerability of such structures involved in vertical mass irregularity. To resolve such a crucial drawback, this papers aims to seismically assess vulnerability of RC tunnel-form buildings considering effects of irregular mass distribution. The results indicate that modal responses are not affected by building's height and patterns of mass distribution in elevation. Moreover, there was no considerable effect observed on the performance levels under DBE and MCE hazard scenarios within different patterns of irregular mass distribution. In conclusion, it appears that necessarily of vertical regularity for tunnel-form buildings, is somehow drastic and conservative at least for the buildings and irregularity patterns studied herein.

Initial Size Distribution of the Milky Way Globular Clusters

  • Shin, Ji-Hye;Kim, Sung-Soo S.
    • The Bulletin of The Korean Astronomical Society
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    • v.35 no.2
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    • pp.35.1-35.1
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    • 2010
  • Unlike the initial mass function, the initial size distribution of globular cluster (GC) systems is not well known. We calculate the evolution of the mass function (MF), radial distribution (RD), and size distribution (SD) of the Galactic GC system. By comparing the results from this calculation and the present-day MF, RD, and SD of the Galactic GC system, we infer the initial SD of the GC system. We find that a Gaussian distribution of the half-mass radius and a Gaussian distribution of the half-mass to Jacobi radius ratio are the best-fit initial SDs of the Galactic GC system.

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Design of Inlet Manifold for PEM Fuel Cells and Numerical Analysis (고분자 전해질 연료전지를 위한 연료주입구 설계 및 수치해석)

  • Uhm, Seung-Bae;Na, Tae-Kyung;Kim, Hong-Suk;Baek, Jung-Sik;Sung, Dong-Mug;Kim, Tae-Min
    • 한국신재생에너지학회:학술대회논문집
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    • 2007.06a
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    • pp.172-175
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    • 2007
  • The Performance of a PEMFC stack is strongly dependent on the uniform reactants distribution on MEA. The uniform distribution can be achieved by flow-field pattern and manifold design optimized to satisfy operating conditions. This paper investigates uniform reactants distribution in channels by changing manifold shape and inlet mass flow rate. Typical U and Z shape and modified U and Z shape manifolds with buffer zone were designed. To check the uniform reactants distribution, standard deviation of mass flow rate was compared. The numerical results show that the inlet mass flow rate, inlet shape, and manifolds shape are critical factor for uniform distribution.

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Research on total resistance of ice-going ship for different floe ice distributions based on virtual mass method

  • Guo, Wei;Zhao, Qiao-sheng;Tian, Yu-kui;Zhang, Wan-chao
    • International Journal of Naval Architecture and Ocean Engineering
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    • v.12 no.1
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    • pp.957-966
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    • 2020
  • This paper presents the virtual mass method to implement the prediction of total resistance for ice-going ship in floe ice region based on the combined method of CFD and DEM. Two ways of floe ice distribution are adopted for the analysis and comparison. The synthetic ice model test has been conducted to determine the optimal virtual mass coefficients for the two different floe ice distributions. Moreover, the further verification and prediction are developed in different ice conditions. The results show that, the fixed and random distributions in numerical method can simulate the interaction of ship and ice vividly, the trend of total resistance varying with the speed and ice concentration obtained by the numerical simulation is consistent with the model test. The random distribution of floe ice has higher similarity and better accuracy than fixed distribution.

An Experimental Study on the Characteristics of Temperature Distribution in Internal Space of a Tube for the Formal Change of Counterflow Type Vortex Tube (대향류형 보텍스 튜브의 노즐형상 변화011 따른 튜브 내부의 온도분포에 관한 실험적 연구)

  • 황승식
    • Transactions of the Korean Society of Automotive Engineers
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    • v.10 no.4
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    • pp.69-76
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    • 2002
  • The aim of this study is to provide fundamental informations that make it possible to use a cool stream and a hot stream simultaneously. We changed the pressure of compressed air that flows into a tube, the inner diameter of orifice that a cold stream exits, and the mass flow rate ratio. And in each case, we measured the temperature of a cold stream and a hot stream in each exit of a tube. Also we measured the axial and the radial temperature distribution in internal spare of a tube. From the study, fellowing conclusive remarks 7an be made. First, As the number of nozzles increase, separation point move into the hot exit. Second, When we use guide vane type nozzle, the axial temperature distribution constant over the 0.75 of air mass flow rate radio. Third, When we use Spiral type nozzle, axial and radial temperature distribution in the inner space is higher than another nozzle. Fourth, Axial and radial temperature distribution in the inner space vortex-tube is determined by separation point. And separation point is moved by changing of air mass flow rate ratio. At last, A heating apparatus is possible far vortex-tube to use.