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Hologram Based QSAR Analysis of CXCR-2 Inhibitors

  • Sathya., B
    • Journal of Integrative Natural Science
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    • v.10 no.2
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    • pp.78-84
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    • 2017
  • CXC chemokine receptor 2 (CXCR2) is a prominent chemokine receptor on neutrophils. CXCR2 antagonist may reduce the neutrophil chemotaxis and alter the inflammatory response because the neutrophilic inflammation in the lung diseases is found to be largely regulated through CXCR2 receptor. Hence, in the present study, Hologram based Quantitative Structure Activity Relationship Study was performed on a series of CXCR2 antagonist named pyrimidine-5-carbonitrile-6-alkyl derivatives. The best HQSAR model was obtained using atoms, bonds, and chirality as fragment distinction parameter using hologram length 151 and 6 components with fragment size of minimum 4 and maximum 7. Significant cross-validated correlation coefficient ($q^2=0.774$) and non cross-validated correlation coefficients ($r^2=0.977$) were obtained. The model was then used to evaluate the six external test compounds and its $r^2_{pred}$ was found to be 0.614. Contribution map show that presence of cyclopropyl ring and its bulkier substituent's makes big contributions for improving the biological activities of the compounds. We hope that our HQSAR model and analysis will be helpful for future design of novel and structurally related CXCR2 antagonists.

GALAXY FORMATION IN THE HUBBLE DEEP FIELD

  • PARK CHANGBOM;KIM JU HAN
    • Journal of The Korean Astronomical Society
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    • v.30 no.1
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    • pp.83-94
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    • 1997
  • We have identified the candidates for the primordial galaxies in the process of formation in the Hubble Deep Field (hereafter HDF). In order to select these objects we have removed objects brighter than 29-th magnitude in the HDF images and smoothed the maps with the Gaussian filters with the FWHM of 0.8' and 4' to obtain the difference maps. This has enabled us to find. very faint diffuse structures close to the sky level. Peaks are identified in the difference map for each of three HDF chips with three filters (F450W, F606W, and F814W). They have the apparent AB magnitudes typically between 29 and 31. The objects identified in different wavelengths filters have a strong cross-correlations. The correlation lengths are about 0.8'. This means that an object found in one filter can be also found as a peak within 0.8' separation in another filter, thus telling the reality of the identified objects. This angular scale is also the size of the primordial galaxies which have strong color fluctuations on their surfaces. Their large-scale distribution quite resembles that of nearby galaxies, supporting the idea that these objects are ancestors of the present bright galaxies forming at statistically high density regions. Inspections on individual objects show that these primordial galaxy candidates have tiny multiple glares embedded in diffuse backgrounds. Their radial light distributions are quite different from that of nearby bright galaxies. We may be now looking at the epoch of galaxy formation.

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An Experimental Study on the Properties of Ultra Rapid Hardening Mortar Using Magnesia-Phosphate Cement (마그네시아 인산염 시멘트를 사용한 보수용 초속경 모르타르의 특성에 관한 실험적 연구)

  • Ahn, Moo-Young;Jung, Sang-Jin
    • Journal of the Korea Institute of Building Construction
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    • v.7 no.4
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    • pp.109-116
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    • 2007
  • Building structures are generally large in size and have a long life, and the construction of such structures requires the investment of a huge amount of money and social infrastructure. Furthermore, building structures are closely related to people's life. Recently, however, the rapid development of society has been worsening air pollution, which is in turn accelerating the degradation of building structures. Thus, the safety of building structure is emerging as a critical issue. To cope with this problem, the government enacted "The Special Act on Safety Control for Infrastructure" but we need engineers' higher concern over the maintenance and reinforcement of existing structures. Recently researches are being made actively on repair mortar using ultra rapid hardening cement for recovering the performance of structures. The present study conducted an experiment on the basic physical properties of ultra rapid hardening mortar for repairing and reinforcing building structures using magnesia cement and mono-ammonium phosphate. In the experiment, we changed the water-cement ratio and carried out replacement at different ratio of MAP/MgO(%). We used retarder to have working life, and made comparative analysis through evaluating working life and fluidity and measuring strength by age.

Influence of High Temperature Deformation Process Variables on the Microstructure and Thermo-physical Properties of a Ni-Fe-Co Alloy (Fe-Ni-Co 합금의 고온 변형 공정 변수와 미세조직 및 열물리적 특성의 상관 관계)

  • Yoon, D.H.;Jung, J.E.;Chang, Y.W.;Lee, J.H.;Lee, K.S.
    • Transactions of Materials Processing
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    • v.21 no.3
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    • pp.207-214
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    • 2012
  • High temperature deformation behavior of a $Ni_{30}Fe_{53}Co_{17}$ alloy, with its extraordinary low coefficient of thermal expansion less than $10{\times}10^{-6}K^{-1}$ at temperatures ranging from room temperature to 673K, was investigated by conducting a series of compression tests. From an empirical processing map, the appropriate working temperature-strain rate combination for optimum forming was deduced to be in the ~1373K, $10^{-2}s^{-1}$ region. This region has a relatively high power dissipation efficiency, greater than 0.36. Furthermore, open die forging of a 100mm diameter billets was performed to confirm the variation of thermo-physical properties in relation to microstructure. The coefficient of thermal expansion was found to increase considerably with increasing the open die forging temperature and decreasing the cooling rate, which in turn provides a drastic increase in the average grain size.

Cloning and Expression of the metE gene coding for homocysteine methyltransferase from the basidiomycete Ganoderma lucidum in E. coli (영지버섯으로부터 homocysteine methyltransferase를 암호화 하는 metE 유전자의 클로닝 및 E. coli에서의 발현)

  • Kim, Hyun-Jeong;Park, Dong-Chul;Lee, Kap-Duk;Lee, Byul-La;Lee, Kap-Rang
    • The Korean Journal of Mycology
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    • v.21 no.4
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    • pp.279-284
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    • 1993
  • The metE gene coding for $N^{5}-methyl-H_{4}-folate;$ homocysteine methyltransferase from the basidiomycete Ganoderma lucidum was cloned by complementation of methionine-requiring mutants of E. coli. The size of a inserted DNA was about 1.54 kb and had 5 restriction enzyme sites. A physical map was constructed. Southern blot analysis confirmed the presence of a transforming DNA in the genome of Ganoderma lucidum. indicating the presence of a single copy.

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Interface Mapping and Generation Methods for Intuitive User Interface and Consistency Provision (사용자 인터페이스의 직관적인 인식 및 일관성 부여를 위한 인터페이스 매핑 및 생성 기법)

  • Yoon, Hyo-Seok;Woo, Woon-Tack
    • 한국HCI학회:학술대회논문집
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    • 2009.02a
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    • pp.135-139
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    • 2009
  • In this paper we present INCUI, a user interface based on natural view of physical user interface of target devices and services in pervasive computing environment. We present a concept of Intuitively Natural and Consistent User Interface (INCUI) consisted of an image of physical user interface and a description XML file. Then we elaborate how INCUI template can be used to consistently map user interface components structurally and visually. We describe the process of INCUI mapping and a novel mapping method selection architecture based on domain size, types of source and target INCUI. Especially we developed and applied an extended LCS-based algorithm using prefix/postfix/synonym for similarity calculation.

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A New Stereo Matching Algorithm (새로운 스테레오 정합 알고리즘)

  • Kim, Choong-Won
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.10 no.10
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    • pp.1829-1834
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    • 2006
  • In this raper in order to recover sharp object boundaries we propose a new efficient stereo matching algorithm in which window size is varied to the distance from the boundaries of object. To this end, the processing region is divided into small subregions with a same area and the disparities of the center pixels in the subregions are calculated using a area-based algorithm with multiple windows. From the this disparity map we can find the edges of the contracted objects. The disparities of original image are obtained using the gradient constraint that means the disparity of the center pixel is similar to the ones of the remaining pixels in the subregion. from the experimental results it is found that the proposed algorithm is very good for recovering sharp object boundaries compared to the similar different algorithm.

Distribution of the Wetness Index and Field Characteristics of Talus Slopes in the Jungsun Area, Gangwon Province (강원도 정선 지역 테일러스 사면의 습윤지수 및 현장 특성)

  • Kim, Seung-Hyun;Koo, Ho-Bon;Rhee, Jong-Hyun;Kim, Sung-Wook;Choi, Eun-Kyeong
    • The Journal of Engineering Geology
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    • v.20 no.4
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    • pp.391-399
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    • 2010
  • We performed a hydraulic analysis based on the wetness index of talus slopes in Jungsun, Gangwon province. We estimated the relation between the degree of development of the temporary water system, and talus topography and distribution. We also assessed the distribution of talus based on a map of the wetness index. We divided areas of tallus into stable and unstable types, and estimated the size, distribution and shape-preferred orientation of clasts. We performed numerical simulations of rockfall events to assess the optimum location of rockfall barriers upon talus slopes.

A Study of PDAs Icon Design Guideline Considered User's Cognitive Human Factor (사용자 인지특성을 고려한 PDA아이콘 설계지침에 관한 연구)

  • Kim, Sang-hwan;Myung, Rohae
    • Journal of Korean Institute of Industrial Engineers
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    • v.30 no.4
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    • pp.338-345
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    • 2004
  • Personal Digital Assistants (PDAs) have become ubiquitous and continued to gain popularity. Since PDAs have some special contexts such as mobility and limited screen size, icons are utilized frequently because icons allow us to do tasks more rapidly and effectively on PDAs like another information appliances. The study presents a cognitive approach to study human factors affecting icon design with multidimensional Scaling (MDS) analysis. In the experiment, a real PDA was used to investigate 29 attributes and2 preference ratings for 22 PDA icons by 20 Korean subjects. As a result, cognitive positioning about icons, attributes, and preference data were arranged on the two dimensional perceptual map. Attributes were grouped by simplicity, universality, activity, complexity, abstraction, static, and alphanumeric time. Subjects preferences were highly related with simplicity attributes group and positive to universality and activity attributes groups. It was also confirmed that there are some icons unfitted to the mental model of Korean. However, when icons are designed for PDAs or similar information appliances to Korean, it should be designed simply and actively with universal image fitted on target users mental model.

Bagging deep convolutional autoencoders trained with a mixture of real data and GAN-generated data

  • Hu, Cong;Wu, Xiao-Jun;Shu, Zhen-Qiu
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.13 no.11
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    • pp.5427-5445
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    • 2019
  • While deep neural networks have achieved remarkable performance in representation learning, a huge amount of labeled training data are usually required by supervised deep models such as convolutional neural networks. In this paper, we propose a new representation learning method, namely generative adversarial networks (GAN) based bagging deep convolutional autoencoders (GAN-BDCAE), which can map data to diverse hierarchical representations in an unsupervised fashion. To boost the size of training data, to train deep model and to aggregate diverse learning machines are the three principal avenues towards increasing the capabilities of representation learning of neural networks. We focus on combining those three techniques. To this aim, we adopt GAN for realistic unlabeled sample generation and bagging deep convolutional autoencoders (BDCAE) for robust feature learning. The proposed method improves the discriminative ability of learned feature embedding for solving subsequent pattern recognition problems. We evaluate our approach on three standard benchmarks and demonstrate the superiority of the proposed method compared to traditional unsupervised learning methods.