• Title/Summary/Keyword: Lep

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RNase P-dependent Cleavage of Polycistronic mRNAs within Their Downstream Coding Regions in Escherichia coli

  • Lee, Jung-Min;Kim, Yool;Hong, Soon-Kang;Lee, Young-Hoon
    • Bulletin of the Korean Chemical Society
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    • v.29 no.6
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    • pp.1137-1140
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    • 2008
  • M1 RNA, the catalytic subunit of Escherichia coli RNase P, is an essential ribozyme that processes the 5' leader sequence of tRNA precursors (ptRNAs). Using KS2003, an E. coli strain generating only low levels of M1 RNA, which showed growth defects, we examined whether M1 RNA is involved in polycistronic mRNA processing or degradation. Microarray analysis of total RNA from KS2003 revealed six polycistronic operon mRNAs (acpP-fabF, cysDNC, flgAMN, lepAB, phoPQ, and puuCBE) showing large differences in expression between the adjacent genes in the same mRNA transcript compared with the KS2001 wild type strain. Model substrates spanning an adjacent pair of genes for each polycistronic mRNA were tested for RNase P cleavage in vitro. Five model RNAs (cysNC, flgMN, lepAB, phoPQ, and puuBE) were cleaved by RNase P holoenzyme but not by M1 RNA alone. However, the cleavages occurred at non-ptRNA-like cleavage sites, with much less efficiency than the cleavage of ptRNA. Since cleavage products generated by RNase P from a polycistronic mRNA can have different in vivo stabilities, our results suggest that RNase P cleavage may lead to differential expression of each cistron.

Response of appetite-related genes in relation to the rearing water temperature in red spotted grouper (Epinephelus akaara)

  • Jeon, Eun-Jeong;Kim, Byeong-Hoon;Lee, Chi-Hoon;Lee, Young-Don
    • Fisheries and Aquatic Sciences
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    • v.23 no.2
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    • pp.4.1-4.9
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    • 2020
  • Growth of fish is controlled by various environmental factors, including water temperature (WT). WT is also a major factor that affects the eating behavior of fish. In this study, we studied the relationship between WT and expression profiles of factors involved in appetite regulation and digestion in red spotted grouper. Fish were divided into three groups with 30 fish per group and reared for 2 weeks in a recirculating system at three different WT (natural WT, 20 ℃, and 25 ℃). After 2 weeks, they were sacrificed immediately after food intake (+ 0 h), 3 h after (+ 3 h), 6 h after (+ 6 h), and 3 h before being fed the next day (- 3 h). Fish samples were obtained for analysis of mRNA expression levels of cholecystokinin (CCK), leptin A (LepA), leptin B (LepB), and neuropeptide Y (NPY) in the brain, liver, and intestine. Expression of CCK and NPY mRNA was significantly higher at 25 ℃ compared to that at natural WT and 20 ℃, but no difference was observed for leptin. This suggests that the red spotted grouper shows characteristics typical of subtropical fish and has higher levels of feeding and digestion when reared at 25 ℃ water temperature condition.

ASTROMETRIC OBSERVATION OF MIRA VARIABLES WITH VERA

  • NAKAGAWA, AKIHARU;OMODAKA, TOSHIHIRO;HANDA, TOSHIHIRO;KAMEZAKI, TATSUYA;PROJECT, VERA
    • Publications of The Korean Astronomical Society
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    • v.30 no.2
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    • pp.189-191
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    • 2015
  • The calibration of the period luminosity relation (PLR) for Galactic Mira variables is one of the principle aims of the VERA project. We observe $H_2O$ maser emission at 22 GHz associated with Mira variables in order to determine their distances based on annual parallaxes. We conduct multi-epoch VLBI observations over 1-2 years with a typical interval of one month using VERA in order to obtain annual parallaxes with an accuracy of better than than 10%. Recently, the annnual parallax of T Lep was determined to be $3.06{\pm}0.04$ mas corresponding to a distance of $327{\pm}4pc$ (Nakagawa et al., 2014). The circumstellar distribution and kinematics of $H_2O$ masers was also revealed. With accurate distances to the sources, calibrations of K-band absolute magnitudes ($M_K$) can be improved compared to conventional studies. By compiling Mira variables whose distances were determined with astrometric VLBI, we obtained a PLR of $M_K=3.51logP+1.37{\pm}0.07$.

Postnatal Expressional Patterns of Adipose-Associated Molecules in the Mouse Proximal Epididymal Fat

  • Lee, Ki-Ho
    • Development and Reproduction
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    • v.23 no.4
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    • pp.313-322
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    • 2019
  • The epididymal fat pad is a male gonadal adipocyte tissue and is histochemically separated into distal and proximal parts. The development of epididymal fat during postnatal period has not been examined in detail. A previous research showed that expression of adipocyte-associated molecules in the distal epididymal fat of mouse is generally increased as postnatally aged. In the present study, expressional patterns of same adipocyte-associated molecules in the mouse proximal epididymal fat at 2, 5, 8, and 12 months of age were studied by quantitative real-time PCR analysis and were compared with those in the distal epididymal fat. The expressional levels of peroxisome proliferator-activated receptor gamma (Pparg), lipoprotein lipase (Lpl), and fatty acid synthase (Fasn) at 5 months of age were significantly lower than those at 2 months of age, while transcript level of leptin (Lep) at 5 months was higher than that at 2 months of age. The transcript levels of all molecules at 8 months of age were significantly increased, compared with those at 2 and 5 months of age. At 12 months of age, expression of delta like non-canonical Notch ligand 1 (Dlk1) was further significantly increased, while there was no change on the transcript level of Pparg and significant decreases of Fabp4, Retn, Lpl, Lep, Fasn, and adiponectin (Adipoq) transcript levels. The current findings show that expressional patterns of molecules associated with adipocyte in the proximal epididymal fat is somewhat different with those of the distal epididymal fat, suggesting the existence of regional variance in the epididymal fat.

A literature Review of Single Nucleotide Polymorphisms in Obesity Genes (비만 유전자 단일 염기 다형성 문헌 고찰)

  • Kim, Sung-Soo;Song, Hee-Ok
    • Journal of Korean Medicine for Obesity Research
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    • v.4 no.1
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    • pp.139-160
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    • 2004
  • The obesity is detrimental to the health of people living in affluent societies. Individual differences in energy metabolism are caused primarily by single nucleotide polymorphisms(SNPs), some of which promote the development of obesity-related type 2 diabetes mellitus. Type 2 diabetes mellitus is a common multifactorial genetic syndrome, which is determined by several different genes and environmental factors. In this review, five major conclusions are reached: (1)To be clinically significant, SNPs must be relevant, prevalent, modifiable, and measurable. (2)Differences in SNPs may have been caused by famine, ultraviolet light, alcohol, climate, agricultural revolution. livestock, lactase persistence, and westernized lifestyle. (3)Candidate obesity genes of calorie intake restriction are SIM 1, MC3R, MC4R, AGRP, CART, CCK, CNTFR, DRD2, Ghrelin, 5-HT receptor, NPY, PON and those of energy metabolism are LEP, LEPR, UCP1, UCP2, UCP3, B2AR, B3AR, PGC-1, Androgen receptor and those of fat mobilization are AGT, ACE, ADA, APM1, Apolipoproteins, PPAR, FABP, FOXC2, GCGR, $11-{\beta}HSDI$, LDLR, Hormonal sensitive lipase, Perilipin, $TNF-{\alpha}$, $TNF-{\beta}$ (4)Candidate obesity genes in the eastern are NPY, LEP, LEPR, UCP1, UCP2, UCP3, B2AR, B3AR, ACE, APM1, PPAR, and FABP. (5)Candidate obesity genes in type 2 diabetes mellitus are MC3R, MC4R, B2AR, B3AR, ADA, APM1, PPAR, FABP, FOXC2, PC1, PC2, ABCC8, CAPN10, CYP19, CYP7, ENPP1, GCK, GYS1, IGF, IL-6, Insulin receptor, IRS, and LPL. The discovery of SNPs will lead to a greater understanding of the pathogenesis of obesity and to better diagnostics, treatment, and eventually prevention.

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A Study on the Map Accuracy Assessment of Positioning Data Using Statistical Approach Analysis (오차분석을 이용한 지도 위치정확도 평가기법에 관한 연구)

  • Cho, Bong-Whan;Lee, Yong-Woong;Choi, Sun-Yong
    • Journal of Korean Society for Geospatial Information Science
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    • v.5 no.1 s.9
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    • pp.71-80
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    • 1997
  • This paper suggests a Map Accuracy Standards by analyzing U.S. National Map Accuracy Standards, by considering korean terrain feature and statistical error theory for paper and digital maps on the scale of 1:50,000. Map accuracy standards require horizontal accuracy to be reported as a circular error with 90% confidence level through Linear Error Probable(LEP) theory and Circular Error Probable(CEP) theory. In order to verify the proposed methodology for positioning accuracy testing, several kinds of test point were selected and tested. These test points were extracted at the centers of roads and bridges, the comers of the independent building, the edges of geographical botany, and the tops of mountains. The positioning accuracy assessment was peformed by comparing the positions of test points in digital maps generated three different sources with those acquired by high accurate GPS surveying. The digital maps were produced from aerial photographs and SPOT satellite image using analytical plotter and 1:50,000 paper map.

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Differential Expression of Adipocyte-Related Molecules in the Distal Epididymal Fat of Mouse during Postnatal Period

  • Lee, Ki-Ho;Kim, Nan Hee
    • Development and Reproduction
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    • v.23 no.3
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    • pp.213-221
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    • 2019
  • The epididymal fat of mouse is a part of visceral fat deposit and is divided into the distal or proximal part based on its histochemical characteristics. Even though the formation of the epididymal fat pad begins before the birth, a detailed adipogenic procedure of the epididymal fat has not been revealed. The epididymal fat pad becomes enlarged and expended with age, and expressional changes of numerous genes are associated with the maturation of fat tissues. In the present research, expressional patterns of adipose tissue-related genes in the distal epididymal fat of mouse at 2, 5, 8, and 12 months of postnatal age were determined by a quantitative real-time polymerase chain reaction (PCR) analysis. The lowest transcript levels of fatty acid binding protein 4 (Fabp4), lipoprotein lipase (Lpl), delta like non-canonical Notch ligand 1 (Dlk1), peroxisome proliferator-activated receptor gamma (Pparg), leptin (Lep), adiponectin (Adipoq), and resistin (Retn) were detected at 2 months of age, except fatty acid synthase (Fasn) showing the lowest level at 5 months of age. Even though expression of Lep and Fabp4 were gradually increased until 12 months of age, significant increases of Pparg and Adipoq transcript levels were continued until 8 months of age. The transcript levels of Lpl, Rent, Dlk1, and Fasn were significantly increased at 8 months of age, compared with those at 2 months of age. The current findings suggest that the expansion of the distal epididymal fat of mouse during postnatal period would be companied with differential expression of various adipocyte-associated molecules.

Description of the Diadegma fenestrale (Hymenoptera: Ichneumonidae: Campopleginae) Attacking the Potato Tuber Moth, Phthorimaea operculella (Lep.: Gelechiidae) New to Korea

  • Choi, Jin-Kyung;Kim, Ju Il;Kwon, Min;Lee, Jong-Wook
    • Animal Systematics, Evolution and Diversity
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    • v.29 no.1
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    • pp.70-73
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    • 2013
  • Diadegma fenestrale is known as a parasitoid of the potato tuber moth, Phthorimaea operculella. The potato tuber moth, Phthorimaea operculella (Zeller) is one of the most destructive pest of potatoes. Also, we found this species attacking the diamondback moth, Plutella xylostella (Lepidoptera: Plutellidae). Ratio of parasitism is 20-30% and cocoon of lepidopteran was parasitic ichneumonid species after 3 days. This species and the genus Diadegma are recorded for the first time from Korea. In this paper, description of the parasitoid and photographs of the diagnostic characteristics are provided.

A spectral domain analysis of microstrip lines using a residue theorem (유수정리를 이용한 마이크로스트립 선로의 스펙트럼 영역 해석)

  • 문병귀;진경수;박병우
    • Journal of the Korean Institute of Telematics and Electronics D
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    • v.35D no.1
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    • pp.8-15
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    • 1998
  • An analysis of the microstripline is started as an assumption of the axial & transveral current distribution. Applying the boundary conditions to the scalar wave equations of a electric & magnetic potential, the two simultaneous coupled integral equations are produced. The electronmagnetic fields in microstrip line can be obtained by solving these two coupled integral equaltion. In general, either a numerical analysis method or a Galerkin method was used to solve them. In this paper, a residue theorem is proposed to solve them. The electromagnetic fields are expressed as integral equations for LSE and LSM mode in the spectral domain. Applying a residue theorem to the Fourier transformed equation and Fourier inverse transformed equation which is necessary for interchanging the space domain and the spectral domain, the electromagnetic fields are expressed as algebraic equations whichare relatively easier to handle. the distributions of the electromagnetic field are shown at the range of -5w/2.leq.x.leq.5w/2, 0.lep.y.leq.4h for z=0. It agrees well with the results of the Quasi-TEM mode analysis.

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Cantilever deflection measurement system for AFM with PSD (PSD를 이요한 AFM용 미세 탐촉자의 변위측정장치)

  • 김홍준;장경영
    • Proceedings of the Korean Society of Precision Engineering Conference
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    • 2000.11a
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    • pp.31-35
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    • 2000
  • A cantilever deflection measurement system for AFM(atomic force microscope) was constructed by the laser deflection method using LEP type PSD. Design process including sensitivity analysis was presented and the performance of the system was demonstrated by several experiments using a sample specimen with 50nm-step on the surface. The measured displacement-amplification-factor showed good agreement with the expected one with about 8% deviation. The step height measurement data were compared to what were acquired by commercial AFM, and the result showed that there were about 5nm-deviation between the two data. These results satisfies our expectation in the stage of system design.

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