• Title/Summary/Keyword: LRR

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Survival of Triple Negative versus Triple Positive Breast Cancers: Comparison and Contrast

  • Negi, Preety;Kingsley, Pamela Alice;Jain, Kunal;Sachdeva, Jaineet;Srivastava, Himanshu;Marcus, Sudeep;Pannu, Aman
    • Asian Pacific Journal of Cancer Prevention
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    • v.17 no.8
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    • pp.3911-3916
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    • 2016
  • Background: Triple negative (TN) and triple positive (TP) breast cancers both are aggressive types but TN generally has a shorter survival. Objectives: To compare the clinical characteristics and treatment outcomes for patients with TN versus TP breast cancer and to assess various prognostic factors affecting overall survival. Materials and Methods: A retrospective audit of 85 breast cancer patients was conducted in the Department of Radiation Oncology and Medical Oncology on patients from 2006 to 2013 for whom IHC for ER, PgR and Her-2 neu were available. The patients were stratified into: ER-, PR- and Her-2 neu- (Arm A, n=47) and ER+, PgR+ and Her-2 neu+ (Arm B, n=38). Results: TN subtype had higher numbers of premenopausal and advanced stage patients as compared to TP subtype. The locoregional recurrence (LRR) and distant metastatic rate was also higher in TN subtype but there was no definite pattern in both the arms. Among the prognostic factors, patients with premenopausal status and advanced stage in TN breast cancer had inferior survival (P=0.07) whereas for those with postmenopausal status and early stage there was no survival difference between the two arms. Conclusions: TN subtype tends to be more aggressive in terms of younger age and advanced stage at presentation, higher tumour grade, LRR and metastasis, suggesting need for future research efforts on providing aggressive treatment to these patients. We could attribute better outcome for TP subtype to receptor positivity enabling role of hormonal treatment and targeted therapy, although less number of patients received targeted therapy.

Genome-wide analysis of heterosis-related genes in non-heading Chinese cabbage

  • Yi, Hankuil;Lee, Jeongyeo;Song, Hayong;Dong, Xiangshu;Hur, Yoonkang
    • Journal of Plant Biotechnology
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    • v.44 no.3
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    • pp.208-219
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    • 2017
  • Heterosis or hybrid vigor describes a phenomenon that superior phenotypes compared to the two parents are observed in the heterozygous $F_1$-hybrid plants. Identification and characterization of heterosis-related genes (HRGs) will facilitate hybrid breeding in crops. To identify HRGs in Brassica rapa, we analyzed transcriptome profiling using a Br300K microarray in non-heading Chinese cabbage at three developmental stages. A large number of genes were differentially expressed in $F_1$ hybrids and non-additive expression was prominent. Genes that are expressed specifically for $F_1$ hybrid at all three stages were Brassica-specific uncharacterized genes and several defense-related genes. Expression of several photosynthesis- and stress-related genes were also $F_1$ hybrid-specific. Thirteen NBS-LRR class genes showed high and specific expression in $F_1$ hybrid Shulu: some of them were characterized as defense genes in Arabidopsis, but most have not been. Further characterization of these defense-related genes in Brassica species and its application will be helpful for understanding the role of defense responses in heterosis. In addition, results obtained in this study will be valuable to develop molecular markers for heterosis and disease resistance in B. rapa.

Role of RIN4 in Regulating PAMP-Triggered Immunity and Effector-Triggered Immunity: Current Status and Future Perspectives

  • Ray, Sujit Kumar;Macoy, Donah Mary;Kim, Woe-Yeon;Lee, Sang Yeol;Kim, Min Gab
    • Molecules and Cells
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    • v.42 no.7
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    • pp.503-511
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    • 2019
  • As sessile organisms, plants have developed sophisticated system to defend themselves against microbial attack. Since plants do not have specialized immune cells, all plant cells appear to have the innate ability to recognize pathogens and turn on an appropriate defense response. The plant innate immune system has two major branches: PAMPs (pathogen associated molecular patterns)-triggered immunity (PTI) and effector-triggered immunity (ETI). The ability to discriminate between self and non-self is a fundamental feature of living organisms, and it is a prerequisite for the activation of plant defenses specific to microbial infection. Arabidopsis cells express receptors that detect extracellular molecules or structures of the microbes, which are called collectively PAMPs and activate PTI. However, nucleotidebinding site leucine-rich repeats (NB-LRR) proteins mediated ETI is induced by direct or indirect recognition of effector molecules encoded by avr genes. In Arabidopsis, plasmamembrane localized multifunctional protein RIN4 (RPM1-interacting protein 4) plays important role in both PTI and ETI. Previous studies have suggested that RIN4 functions as a negative regulator of PTI. In addition, many different bacterial effector proteins modify RIN4 to destabilize plant immunity and several NB-LRR proteins, including RPM1 (resistance to Pseudomonas syringae pv. maculicola 1), RPS2 (resistance to P. syringae 2) guard RIN4. This review summarizes the current studies that have described signaling mechanism of RIN4 function, modification of RIN4 by bacterial effectors and different interacting partner of RIN4 in defense related pathway. In addition, the emerging role of the RIN4 in plant physiology and intercellular signaling as it presents in exosomes will be discussed.

The Effects on the Aerobic Function of Major in Dance and Common Students after Treadmill Gait Exercise (트레드밀 보행운동이 무용전공학생과 일반학생의 유산소 운동능력에 대한 비교)

  • Seo, Kyo-Chul;Park, Seung-Hwan
    • Journal of the Korea Convergence Society
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    • v.10 no.5
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    • pp.79-84
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    • 2019
  • The purpose of this study was to examine the effects of treadmill exercise on the aerobic function of dance majors in their 20s. The subjects consisted of 10 female Korean dance majors in their 20s as an experimental group and 10 normal female college students as a control group, and both groups conducted treadmill gait training. Their heart rate recovery (HRR), maximal oxygen uptake (MOU), maximal voluntary ventilation (MVV), and lactate recovery rate (LRR) were measured before and after the experiment. The comparison of changes in the subjects' aerobic function before and after the experiment showed that the experimental group gained more significant effects on HRR and LRR than the control group. Therefore, treadmill gait training may help Korean dance majors to improve their basic physical strength by enhancing their aerobic function, and the findings of this study are likely to provide basic data to support scientific exercise prescriptions.

Optimal Design of 70GHz Band Array Antenna for Short-Range Radar Sensor using The Chebyshev Polynomials (Chebyshev 다항식을 이용한 70GHz 대역 근거리 레이다 센서용 배열안테나의 최적설계)

  • Gue-Chol Kim;Joo-Suk Kim
    • The Journal of the Korea institute of electronic communication sciences
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    • v.19 no.1
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    • pp.11-18
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    • 2024
  • This paper presents a procedure to optimize the design of 70GHz band array antenna for automotive short range radar sensor applications using Chebyshev polynomials. SRR(: Short Range Radar) systems require a wide angle width and low Side lobe level to detect targets within close proximity while ensuring a high Field of View(FoV). The optimized antenna operates in the 76 to 81GHz frequency range, and to reduce the antenna size, we arranged 12 patches in series, achieving an SLL of 10dB, angle with of 112.5o, gain of 15.4dB and an input return loss of less than -10dB at 78GHz. In this paper, we proceed with antenna design for SRR using Chebyshev polynomials, and present an optimal design for antenna structures to be used in MRR(: Medium-Range Radar) and LRR(: Long Range Radar) applications based on this paper

Change Detection at the Nakdong Estuary Delta Using Satellite Image and GIS (위성영상과 GIS를 이용한 낙동강하구 지형변화탐지)

  • Oh, Che-Young;Park, So-Young;Choi, Chul-Uong;Jeon, Sung-Woo
    • Journal of Korean Society for Geospatial Information Science
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    • v.18 no.1
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    • pp.21-29
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    • 2010
  • Nakdong Estuary Delta plays various roles of worldwide habitat for migratory birds and a sand supplier to Haewoondae Beach and Gwanganri, which are tourist attractions of Busan. In this study, long-term topographical changes of Nakdong Estuary (Jinwoo Islet, Sinja Islet, Doyodeung, Dadae Beach) coast were detected and interpreted. Through the analysis of 34 years' satellite images, it was found out that a part in between front side and back side of Jinwoo Islet increased, Sinja Islet was divided into two belts in 1970, and has formed an islet since the 1980s and extended westward. Due to the rapid development of small islets in front of Baekhabdeung since 1990s, Doyodeung formed in the late 1990s and is still growing. To make coastal map of Nakdong Estuary area, 13 images, of which the tide level was $99{\pm}13cm$, from the 112 Landsat images of the period from 1975 to 2009 were selected to section into water zone and land zone using NDV. And the rates of coastal line change such as MATLAB EPR(End Point Rate) and LRR(Linear Regression Rate) were calculated using DSAS 4.0(Digital Shoreline Analysis System). Through detecting topographical changes, EPR showed that the front(south) and back side(north) of Jinwoo Islet moved southward at -0.93~2.56m/yr, and changes in costal line and area of Jinwoo Islet were low and stable. The front and backside of Sinja Islet moved northward at 1~4m/yr, whereas the west side of Sinja Islet was stable at 2~3m/yr and east side of Sinja Islet moved northward at 10m/yr or faster. The front and back side of Doyodeung moved northward at 18~27m/yr, causing the increase of area, while the coastal line of Dadae Beach moved westward at 7m/yr, causing the expansion of the beach. LRR also demonstrated a similar trend to EPR. Although analysis of satellite images and GIS could enabled detection of topographical changes and quantitative analysis of natural phenomena, we found that continuous observation of natural phenomena and various analytical methods are required.

Ligand Recognition by the Toll-like Receptor Family

  • Jin, Mi-Sun;Lee, Jie-Oh
    • Animal cells and systems
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    • v.13 no.1
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    • pp.1-8
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    • 2009
  • Toll-like receptor (TLR) family proteins, type I transmembrane proteins, play a central role in human innate immune response by recognizing common structural patterns in diverse molecules from bacteria, viruses and fungi. Recently four structures of the TLR and ligand complexes have been determined by high resolution x-ray crystallographic technique. In this review we summarize reported structures of TLRs and their proposed activation mechanisms. The structures demonstrate that binding of agonistic ligands to the extracellular domains of TLRs induces homo- or heterodimerization of the receptors. Dimerization of the TLR extracellular domains brings their two C-termini into close proximity. This suggests a plausible mechanism of TLR activation: ligand induces dimerization of the extracellular domains, which enforces juxtaposition of intracellular signaling domains for recruitment of intracellular adaptor proteins for signal initiation.

Validation of the Reynolds Stress Turbulence Models in Turbulent Jet Diffusion Flames (난류분류확산화염에 대한 레이놀즈응력모델의 적용성 검토)

  • 한지웅;이태우;이근오;이창언
    • Journal of the Korean Society of Safety
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    • v.11 no.3
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    • pp.66-74
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    • 1996
  • Numerical simulations were carried out using standard Reynolds stress turbulence model(LRR model) and modified RSM(Janicka model ) to validate these models in combustion flow fields. Two flames were selected for use as a benchmark data for model testing. One is a conventional jet diffusion flame that has the effect of suppression of turbulence by combustion. The other is a triple jet diffusion flame that designed to give high turbulence to the periphery of the flame and to remove the low Reynolds-number flow fields. As a result, it was found that the modification of standard RSM model is indispensable in the modelling of flames with low turbulence region. And it is also necessary to improve the existing modified models for the universal use.

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Antenna Array Compensation for Improved DOA Estimation (도래각 추정 성능 향상을 위한 배열 안테나 보정 기법)

  • Song, Heemang;Cho, Seunghoon;Lee, Jaeeun;Jeong, Seonghee;Shin, Hyun-Chool
    • The Transactions of The Korean Institute of Electrical Engineers
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    • v.64 no.5
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    • pp.786-791
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    • 2015
  • This paper presents a signal processing method for calibrating an antenna array to solve the inaccuracy of Direction of Arrival(DOA). Using reference data quantifying amplitude and phase distortion levels for each angles, we compensate each radar array’s amplitude and phase distortion. The proposed method is applied to the Bartlett, Capon and MUSIC algorithms, Using 77 GHz Frequency Modulated Continuous Wave(FMCW) Long Range Radar(LRR) signal, we experimentally demonstrate the performance improvement after the proposed compensation.