• Title/Summary/Keyword: Hierarchical Likelihood

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Genetic Mixed Effects Models for Twin Survival Data

  • Ha, Il-Do;Noh, Maengseok;Yoon, Sangchul
    • Communications for Statistical Applications and Methods
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    • v.12 no.3
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    • pp.759-771
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    • 2005
  • Twin studies are one of the most widely used methods for quantifying the influence of genetic and environmental factors on some traits such as a life span or a disease. In this paper we propose a genetic mixed linear model for twin survival time data, which allows us to separate the genetic component from the environmental component. Inferences are based upon the hierarchical likelihood (h-likelihood), which provides a statistically efficient and simple unified framework for various random-effect models. We also propose a simple and fast computation method for analyzing a large data set on twin survival study. The new method is illustrated to the survival data in Swedish Twin Registry. A simulation study is carried out to evaluate the performance.

Maximum Likelihood Estimation Using Laplace Approximation in Poisson GLMMs

  • Ha, Il-Do
    • Communications for Statistical Applications and Methods
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    • v.16 no.6
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    • pp.971-978
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    • 2009
  • Poisson generalized linear mixed models(GLMMs) have been widely used for the analysis of clustered or correlated count data. For the inference marginal likelihood, which is obtained by integrating out random effects is often used. It gives maximum likelihood(ML) estimator, but the integration is usually intractable. In this paper, we propose how to obtain the ML estimator via Laplace approximation based on hierarchical-likelihood (h-likelihood) approach under the Poisson GLMMs. In particular, the h-likelihood avoids the integration itself and gives a statistically efficient procedure for various random-effect models including GLMMs. The proposed method is illustrated using two practical examples and simulation studies.

Review of Mixed-Effect Models (혼합효과모형의 리뷰)

  • Lee, Youngjo
    • The Korean Journal of Applied Statistics
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    • v.28 no.2
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    • pp.123-136
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    • 2015
  • Science has developed with great achievements after Galileo's discovery of the law depicting a relationship between observable variables. However, many natural phenomena have been better explained by models including unobservable random effects. A mixed effect model was the first statistical model that included unobservable random effects. The importance of the mixed effect models is growing along with the advancement of computational technologies to infer complicated phenomena; subsequently mixed effect models have extended to various statistical models such as hierarchical generalized linear models. Hierarchical likelihood has been suggested to estimate unobservable random effects. Our special issue about mixed effect models shows how they can be used in statistical problems as well as discusses important needs for future developments. Frequentist and Bayesian approaches are also investigated.

Statistical Inference in Non-Identifiable and Singular Statistical Models

  • Amari, Shun-ichi;Amari, Shun-ichi;Tomoko Ozeki
    • Journal of the Korean Statistical Society
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    • v.30 no.2
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    • pp.179-192
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    • 2001
  • When a statistical model has a hierarchical structure such as multilayer perceptrons in neural networks or Gaussian mixture density representation, the model includes distribution with unidentifiable parameters when the structure becomes redundant. Since the exact structure is unknown, we need to carry out statistical estimation or learning of parameters in such a model. From the geometrical point of view, distributions specified by unidentifiable parameters become a singular point in the parameter space. The problem has been remarked in many statistical models, and strange behaviors of the likelihood ratio statistics, when the null hypothesis is at a singular point, have been analyzed so far. The present paper studies asymptotic behaviors of the maximum likelihood estimator and the Bayesian predictive estimator, by using a simple cone model, and show that they are completely different from regular statistical models where the Cramer-Rao paradigm holds. At singularities, the Fisher information metric degenerates, implying that the cramer-Rao paradigm does no more hold, and that he classical model selection theory such as AIC and MDL cannot be applied. This paper is a first step to establish a new theory for analyzing the accuracy of estimation or learning at around singularities.

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Decision Tree Based Context Clustering with Cross Likelihood Ratio for HMM-based TTS (HMM 기반의 TTS를 위한 상호유사도 비율을 이용한 결정트리 기반의 문맥 군집화)

  • Jung, Chi-Sang;Kang, Hong-Goo
    • The Journal of the Acoustical Society of Korea
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    • v.32 no.2
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    • pp.174-180
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    • 2013
  • This paper proposes a decision tree based context clustering algorithm for HMM-based speech synthesis systems using the cross likelihood ratio with a hierarchical prior (CLRHP). Conventional algorithms tie the context-dependent HMM states that have similar statistical characteristics, but they do not consider the statistical similarity of split child nodes, which does not guarantee the statistical difference between the final leaf nodes. The proposed CLRHP algorithm improves the reliability of model parameters by taking a criterion of minimizing the statistical similarity of split child nodes. Experimental results verify the superiority of the proposed approach to conventional ones.

A spatial analysis of Neyman-Scott rectangular pulses model using an approximate likelihood function (근사적 우도함수를 이용한 Neyman-Scott 구형펄스모형의 공간구조 분석)

  • Lee, Jeongjin;Kim, Yongku
    • Journal of the Korean Data and Information Science Society
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    • v.27 no.5
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    • pp.1119-1131
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    • 2016
  • The Neyman-Scott Rectangular Pulses Model (NSRPM) is mainly used to construct hourly rainfall series. This model uses a modest number of parameters to represent the rainfall processes and underlying physical phenomena, such as the arrival of storms or rain cells. In NSRPM, the method of moments has often been used because it is difficult to know the distribution of rainfall intensity. Recently, approximated likelihood function for NSRPM has been introduced. In this paper, we propose a hierarchical model for applying a spatial structure to the NSRPM parameters using the approximated likelihood function. The proposed method is applied to summer hourly precipitation data observed at 59 weather stations (Korea Meteorological Administration) from 1973 to 2011.

Inference for heterogeneity of treatment eect in multi-center clinical trial

  • Ha, Il-Do
    • Journal of the Korean Data and Information Science Society
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    • v.22 no.3
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    • pp.605-612
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    • 2011
  • In multi-center randomized clinical trial the treatment eect may be changed over centers. It is thus important to investigate the heterogeneity in treatment eect between centers. For this, uncorrelated random-eect models assuming independence between random-eect terms have been often used, which may be a strong assumption. In this paper we propose a correlated frailty modelling approach of investigating such heterogeneity using the hierarchical-likelihood method when the outcome is time-to-event. In particular, we show how to construct a proper prediction interval for frailty, which explores graphically the potential heterogeneity for a treatment-by-center interaction term. The proposed method is illustrated via numerical studies based on data from the design of a multi-center clinical trial.

A Joint Frailty Model for Competing Risks Survival Data (경쟁위험 생존자료에 대한 결합 프레일티모형)

  • Ha, Il Do;Cho, Geon-Ho
    • The Korean Journal of Applied Statistics
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    • v.28 no.6
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    • pp.1209-1216
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    • 2015
  • Competing-risks events are often observed in a clustered clinical study such as a multi-center clinical trial. We propose a joint modelling approach via a shared frailty term for competing risks survival data from a cluster. For the inference we use the hierarchical likelihood (or h-likelihood), which avoids an intractable integration. We derive the corresponding h-likelihood procedure. The proposed method is illustrated via the analysis of a practical data set.

A generalized model for categorical data from epidemiological studies (질병의 범주적 자료에 대한 통계적 분석모형)

  • 최재성
    • The Korean Journal of Applied Statistics
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    • v.9 no.1
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    • pp.1-15
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    • 1996
  • This paper discusses the effectiveness of an infection rate under a certain disease on an immunity rate by a protective inoculation. A sequence of dependense models concerning the infection rate is derived by defining conditionally nested binary random variables for the analysis of polytomous data with hierarchical response scale. Maximum likelihood estimates based on the marginal log-likelihood functin are obtained numerically in the Nelder and Mead's(1965) simplex method.

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