• Journal of Microbiology
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• 제43권6호
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• pp.487-492
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• 2005

This study demonstrated that the brown rot basidiomycete Fomitopsis palustris was able to degrade crystalline cellulose (Avicel). This fungus could also produce the three major cellulases (exoglucanases, endoglucanases, and $\beta-glucosidase$) when the cells were grown on $2.0\%$ Avicel. Avicel degraded by F. palustris showed a decrease in relative crystallinity from $83\%\;to\;78.5\%$ after 14 days of incubation. The characterization study indicated that optimum pH was 4.5 and optimum temperature was $70^{\circ}C$ for exoglucanase (cellobiohydrolase) activity. Hydrolysis of Avicel by the crude enzyme from F. palustris yielded 1.6 mg/ml of glucose after 43 h, which corresponded to a cellulose conversion degree of $3.2\%$. Therefore, this study revealed for the first time that the brown rot basidiomycete F. palustris produces cellulases capable of yielding soluble sugars from crystalline cellulose.

• Journal of Microbiology and Biotechnology
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• 제21권4호
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• pp.347-358
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• 2011

Fomitopsis palustris, a brown-rot basidiomycete, causes the most destructive type of decay in wooden structures. In spite of its great economic importance, very little information is available at the molecular level regarding its complex decay process. To address this, we generated over 3,000 expressed sequence tags (ESTs) from a cDNA library constructed from F. palustris. Clustering of 3,095 high-quality ESTs resulted in a set of 1,403 putative unigenes comprising 485 contigs and 918 singlets. Homology searches based on BlastX analysis revealed that 78% of the F. palustris unigenes had a significant match to proteins deposited in the nonredundant databases. A subset of F. palustris unigenes showed similarity to the carbohydrateactive enzymes (CAZymes), including a range of glycosyl hydrolase (GH) family proteins. Some of these CAZyme-encoded genes were previously undescribed for F. palustris but predicted to have potential roles in biodegradation of wood. Among them, we identified and characterized a gene (FpCel45A) encoding the GH family 45 endoglucanase. Moreover, we also provided functional classification of 473 (34%) of F. palustris unigenes using the Gene Ontology hierarchy. The annotated EST data sets and related analysis may be useful in providing an initial insight into the genetic background of F. palustris.

• Journal of Forest and Environmental Science
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• 제24권1호
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• pp.53-59
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• 2008

목질 바이오매스(wood biomass)를 효율적으로 분해하는 최적 배양조건을 확립하기 위하여 국내 침엽수 4수종(소나무, 낙엽송, 잣나무, 리기다소나무)의 목질바이오매스를 혼합하여 목분의 적정입도, 배양기간, 기질첨가농도별 균주의 균체외효소 활성을 측정하였다. 연구 결과, 혼합목분을 기질로 했을때 Fomitopsis palustris가 분비하는 균체외효소 활성은 효소 종류에 따라 기질농도, 목분입도, 및 배양기간등의 배양조건에 따라 다른 효소활성 값을 나타냈다. 침엽수 혼합목분을 기질로 했을 때 대부분의 cellulase 분비를 유도하는 최적 조건은 목분 입도, 80~100 mesh, 기질 농도는 7.5%가 적정한 것으로 밝혀졌다. 또한 최적의 목분입도 및 투입농도 조건에서 배양기간은 4~8주로 적절한 것으로 구명되었다.

• Journal of the Korean Wood Science and Technology
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• 제35권6호
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• pp.159-165
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• 2007

본 논문에서는 갈색부후균 Fomitopsis palustris가 볏짚을 분해하는 과정 중에 생산하는 xylanase를 확인하여 분리 정제하고, 아미노산 서열분석을 통해 동정하였다. 그리고 동정된 단백질의 효소특성을 조사하였다. 분리 정제된 단백질은 SDS-PAGE분석에서 43kDa의 분자량을 나타내었고, 아미노산 서열분석에서는 Glycoside Hydrolase family 10에 속하는 xylanase와 높은 상동성을 나타내었다. 정제효소의 기질에 대한 $K_m$치는 $31 mg/m{\ell}$, $V_{max}$는 252.3 U/mg, $K_{cat}$은 $2.3{\times}10^4/min$이고, 최적 pH 범위는 pH 4.0~5.0 최대 활성 온도는 $70^{\circ}C$로 밝혀졌다.

• Journal of Microbiology and Biotechnology
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• 제18권3호
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• pp.404-409
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• 2008

The brown-rot basidiomycete Fomitopsis palustris is known to degrade crystalline cellulose (Avicel) and produce three major cellulases, exoglucanases, endoglucanases, and ${\beta}$-glucosidases. A gene encoding endoglucanase, designated as cel12, was cloned from total RNA prepared from F. palustris grown at the expense of Avicel. The gene encoding Cel12 has an open reading frame of 732 bp, encoding a putative protein of 244 amino acid residues with a putative signal peptide residing at the first 18 amino acid residues of the N-terminus of the protein. Sequence analysis of Cel12 identified three consensus regions, which are highly conserved among fungal cellulases belonging to GH family 12. However, a cellulose-binding domain was not found in Cel12, like other GH family 12 fungal cellulases. Northern blot analysis showed a dramatic increase of cel12 mRNA levels in F. palustris cells cultivated on Avicel from the early to late stages of growth and the maintenance of a high level of expression in the late stage, suggesting that Cel12 takes a significant part in endoglucanase activity throughout the growth of F. palustris. Adventitious expression of cel12 in the yeast Pichia pastoris successfully produced the recombinant protein that exhibited endoglucanase activity with carboxymethyl cellulose, but not with crystalline cellulose, suggesting that the enzyme is not a processive endoglucanase unlike two other endoglucanases previously identified in F. palustris.

• Journal of the Korean Wood Science and Technology
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• 제35권6호
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• pp.91-99
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• 2007

소나무, 낙엽송, 리기다소나무, 잣나무 등 국내산 침엽수 목분을 기질로 진탕배양했을 때 갈색부후균인 Fomitopsis palustris로부터 분비된 당 분해성 균체 외 효소는 Endoglucanase (EG), $\beta$-glucosidase (BGL) 및 $\beta$-1,4-xylosidase (BXL)와 함께 결정형 셀룰로오스를 분해하는 Cellobiohydrolase (CBH)도 활성을 갖은 것으로 나타났다. 4주간 배양에서 변재는 심재에 비해 큰 효소활성을 나타냈으나, 배양기간을 증가시킴으로써 효소활성이 커지는 것으로 밝혀져 효소에 의한 목질바이오매스 분해의 경우 심변재 혼합처리도 가능할 수 있음이 시사되었다. 그리고, 균체 의 단백질을 SDS-PAGE로 분석한 결과, 대부분의 수종에서 나타나는 효소의 단백질 패턴은 거의 유사한 것으로 나타나 효소를 이용한 목질계 바이오매스 분해의 경구 수종별 혼합처리도 가능함이 시사되었다. F. palustris에 의해 분해된 목분(60 mesh 통과) 셀룰로오스의 결정화도 감소율은 4주 배양에서 약 4.2~20.4%, 8주 배양에서 약 12.9~28.9% 수준으로 나타났다.

• Journal of Microbiology and Biotechnology
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• 제17권5호
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• pp.800-805
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• 2007

Two endoglucanases with processive cellulase activities, produced from Fomitopsis palustris grown on 2% microcrystalline cellulose(Avicel), were purified to homogeneity by anion-exchange and gel filtration column chromatography systems. SDS-PAGE analysis indicated that the molecular masses of the purified enzymes were 47 kDa and 35 kDa, respectively. The amino acid sequence analysis of the 47-kDa protein(EG47) showed a sequence similarity with fungal glycoside hydrolase family 5 endoglucanase from the white-rot fungus Phanerochaete chrysosporium. N-terminal and internal amino acid sequences of the 35-kDa protein(EG35), however, had no homology with any other glycosylhydrolases, although the enzyme had high specific activity against carboxymethyl cellulose, which is a typical substrate for endoglucanases. The initial rate of Avicel hydrolysis by EG35 was relatively fast for 48 h, and the amount of soluble reducing sugar released after 96 h was $100{\mu}g/ml$. Although EG47 also hydrolyzed Avicel, the hydrolysis rate was lower than that of EG35. Thin layer chromatography analysis of the hydrolysis products released from Avicel indicated that the main product was cellobiose, suggesting that the brown-rot fungus possesses processive EGs capable of degrading crystalline cellulose.

• Journal of the Korean Wood Science and Technology
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• 제38권3호
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• pp.262-273
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• 2010

갈색부후균인 Fomitopsis palustris에서 균체 외 cellulase 생산 특성과 이 효소를 이용하여 목재와 볏짚의 당화특성, mediator 첨가 효과, 목질기질의 미세 표면구조나 결정화도가 효소 당화에 미치는 영향 등에 대해 연구하였다. F. palustris의 균체 외 효소의 생산에 혼합목분을 탄소원으로 이용 시 endo-${\beta}$-1,4-gulcanase (EG)는 12.0 U/$m{\ell}$, ${\beta}$-glucosidase (BGL)는 116.68 U/$m{\ell}$, cellobiohydrolase (CBH)는 18.82 U/$m{\ell}$, 그리고 ${\beta}$- xylosidase (BXL)는 13.33 U/$m{\ell}$의 활성을 보였다. 이러한 활성은 BGL, CBH, 그리고 BXL이 볏짚을 이용한 경우보다 약 2~4배 정도 높았다. 볏짚을 탄소원으로 이용하여 생산한 cellulase-RS의 효소 최적반응 온도 및 pH는 $45^{\circ}C$와 pH 5.0이었으며, 혼합 목분을 탄소원으로 이용하여 생산한 cellulase-SW의 경우에는 $50^{\circ}C$와 pH 5.0이었다. Cellulase-SW는 볏짚을 기질로 사용할 때 $40.6{\pm}0.6%$로 가장 높은 당화율을 보였다. 또한 당화촉매제인 Tween 20의 첨가로 당화율이 44%로 상승하여 상용화 효소인 Celluclast 1.5L의 53.7%의 당화율 대비 약 82% 수준으로 상승되었다. 이는 본 실험에서 사용한 효소가 조효소 형태임을 고려하면 상용화 효소에 매우 근접한 당화율을 얻은 것으로 판단된다. 또한 볏짚의 낮은 조직 결정화도와 주사전자현미경을 이용한 볏짚 표면의 섬유화를 통한 표면적 증대 효과는 목재에 비해 높은 볏짚의 당화율에 대한 원인을 제시하였다.

• 한국신재생에너지학회:학술대회논문집
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• 한국신재생에너지학회 2006년도 추계학술대회
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• pp.529-532
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• 2006

Recently the production of ethanol from lignocecllulosics has received much attention due to immense potential for conversion of renewable biometerials into biofuels and chemicals. Fomitopsis palustris causes a typycal brown-rot and is unusual in that it rapidly depolymerize the cellulose in wood without removing the surrounding lignin that normally prevents microbial attack. This study demonstrated that the brown rot basidiomycete F. palustris was able to degrade crystalline cellulose. This fungus could also produce the three major cellulases (BGL, EXG and EG) when the cells were grown on 2.0% Avicel. The fungus was able to degrade both the crystalline and amorphous forms of cellulose from woody biomasses. Moreover, we found that this fungus has the processive EG like CBH which are able to degrade the crystalline region of cellulose. To establish the cellulase system in relation with degradation of woody biomass, we performed that purification, characterization and molecular cloning of a BGL, EGs and GLA from F. palustris grown on Avicel.

• Journal of the Korean Wood Science and Technology
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• 제44권6호
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• pp.880-889
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• 2016

To evaluate the resistance of wood to decay caused by fungi, sapwood and heartwood of red pine (Pinus densiflora) and sapwood and heartwood of larch (Larix kaempferi) were conducted. Wood samples were immersed for 96 h in pyroligneous liquor. Then, the brown-rot fungus, Fomitopsis palustris, was used to examine the decay resistance of red pine and larch. Weight and density of wood from the all conditions increased after immersion treatment. Weight loss after decay resistance test was also dropped with a immersion treatment. The lowest weight loss indicated at immersion-treated heartwood of larch. Immersion treatment using pyroligneous liquor effectively increased the resistance of wood to decay caused by fungi.