• 제목/요약/키워드: Diversity index(H')

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새우조망을 이용한 금강 하구역 어획물의 계절별 종조성 및 군집분석 (Seasonal species composition and cluster analysis of catches by shrimp beam trawl in the Geum river estuary)

  • 이선길;최문성;서영일;이재봉
    • 수산해양기술연구
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    • 제50권4호
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    • pp.455-466
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    • 2014
  • Seasonal variations in species composition of catches were explored using seasonal samples caught by shrimp beam trawl in the Geum river estuary in 2011. During the study period, total catches were collected 91 species as fish 47 species, crustacean 28 species, mollusca 4 species, gastropoda 5 species, shellfish 3 species and others 4 species. The dominant species were Exopalaemon carinicauda, Eriocheir leptognathus, Palaemon gravieri, Mugil cephalus, Acanthogobius hasta, Cynoglossus joyneri, Pennahia argentata and Coilia nasus. The amount of species in spring and summer was higher than in autumn. The diversity index (H') was 0.43~0.96, evenness index (EI) was 0.14~0.25, and richness index (RI) was 1.54~4.25. Using cluster analysis 91 species were divided into 4 groups. Group I appeared mainly in spring and summer. Group II appeared only in summer. Group III appeared in winter and spring, and Group IV in spring and autumn.

한국 특산식물 매미꽃(Coreanomecon hylomeconoides Nakai) 집단의 유전다양성 및 구조 (Genetic Diversity and Structure of the Korean Endemic Species, Coreanomecon hylomeconoides Nakai, as Revealed by ISSR markers)

  • 손성원;정재민;김은혜;최경수;박선주
    • 한국자원식물학회지
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    • 제26권2호
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    • pp.310-319
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    • 2013
  • 우리나라 특산식물인 매미꽃(Coreanomecon hylomeconoides Nakai) 집단의 유전적 다양성 및 구조를 조사하기 위해 8집단 224개체에 대한 ISSR(Inter Simple Sequence Repeat) 분석이 수행되었다. 총 8개의 ISSR 프라이머를 이용하여 50개의 증폭산물을 관찰하였으며 집단 수준에서의 유전적 다양성의 평균은 P (Percentage of polymorphic loci) = 47.3%, SI(Shannon's information index) = 0.218, h (Nei's genetic diversity) = 0.142로 다년생 초본류의 평균보다는 월등히 낮게 나타났다. 집단별로는 분포의 중심에 해당하는 산청(SI=0.233, h=0153), 광양(SI=0.263, h=0.171), 순천(SI=0.241, h=0.159) 집단이 남해(SI=0.183, h=0.116)나 광주(SI=0.181, h=0.121)의 변두리 집단보다는 비교적 높은 유전다양성을 유지하는 것으로 나타났다. AMOVA 분석 결과 전체 유전변이의 약 18%가 지역 간에 나머지 82%가 집단 내 개체간의 차이에 기인하는 것으로 나타났는데 이는 집단 간에 유전자 교류가 원활히 이루어지기 때문으로 판단된다. 유전적 거리를 이용한 UMGMA 유집분석과 Bayesian cluster 분석 결과, 매미꽃 집단은 동서 두 지역으로 구조화 되는 경향을 보여 주었는데 이는 집단의 지리적 분포 패턴의 영향인 것으로 추정할 수 있다. 본 연구 결과, 조사된 다른 집단보다 풍부한 개체수와 높은 유전 다양성을 유지하고 있는 지리산 및 백운산의 산청, 광양 집단들에 대한 적극적인 현지 내(in situ) 보전대책 수립이 요구된다.

낙동강 하구 생태계의 종속영양세균의 군집구조 분석 및 수리학적 분류 (Characterization and Numerical Taxonomy of Heterotrophic Bacterial Community in Naktong Estuarine Ecosystem)

  • 귄오섭;조경제
    • 미생물학회지
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    • 제30권6호
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    • pp.444-449
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    • 1992
  • 낙동강 하구생태계에 분포한 종속영양세균의 환경 변화에 따른 군집구조의 변화를 파악하기 위해 총 858 균주를 분리하여 수리학적 방법에 의해 분석하였다. 종의 다양성(H') 은 1.54-3.49 로, 하구언 건설 전의 수치와 큰 차이가 없었으나, 균등성지수(evenness index)(J') 는 0.31-0.80 으로 감소하였다. Physiological tolerance index 중 수온에 대한 지수(P') 는 수심이 얕은 정점에서, pH 와 염분에 대한 $P_{h}$$P_{s}$ 는 담수와 해수가 교차하는 정점에서 높았다. 우점의 cluster 를 속 (genus) 수준에서 동정한 결과 Aeromonas, Vibrio, Pseudomonas, Acinetobacter-Morexella, Alcaligenes, Flavobacterium, Micrococcaceae, Enterobacteriaceae 등으로 분류되어 하구언 축조 전과 동일한 종류의 세균뷴포를 나타냈으나 그 출현비율은 달랐다. 이와 같은 결과로 미루어 하구언 축조 등에 따른 낙동강 하구역의 환경변화는 분포세균의 종류보다는 생리적 특셩에 영양을 미쳐 특정종의 우점을 나타나게 한 것으로 사료된다.

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순천만에 자생하는 염생식물 근권에서 유래한 해양세균의 계통학적 분석 및 다양성 (Phylogenetic Analysis and Diversity of Marine Bacteria Isolated from Rhizosphere Soils of Halophyte in Suncheon Bay)

  • 유영현;박종명;이명철;김종국
    • 한국미생물·생명공학회지
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    • 제43권1호
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    • pp.65-78
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    • 2015
  • 순천만의 염생식물 근권에서 정주하는 세균의 분리를 위해 순천만에서 우점하는 자생식물인 칠면초 군락 3개 지점을 선발하여 샘플링 하였다. 시료는 marine broth, tryptic soy broth 한천배지를 통해 분리되었으며, 형태학적인 구분을 통해 순수분리되었다. 분리주의 16S rDNA를 분석하여 총 92 균주가 동정되었다. 이들의 유연관계 확인을 위한 계통수 작성 결과, 각각 firmicutes (56.5%), gamma-proteobacteria (29.3%), alpha-proteobacteria (5.4%), actinobacteria (5.4%), bacteroidetes (3.3%)에 속하였다. Shannon’s Diversity index (H')를 산출하였을 때 각각 1.675, 1.924, 2.04로, 채취 지점별로 종 다양성의 차이를 보였다.

Genetic Diversity of Wild Quail in China Ascertained with Microsatellite DNA Markers

  • Chang, G.B.;Chang, H.;Liu, X.P.;Zhao, W.M.;Ji, D.J.;Mao, Y.J.;Song, G.M.;Shi, X.K.
    • Asian-Australasian Journal of Animal Sciences
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    • 제20권12호
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    • pp.1783-1790
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    • 2007
  • The genetic diversity of domestic quail and two wild quail species, Japanese (Coturnix coturnix)and Common quail (Coturnix japonica), found in China was studied using microsatellite DNA markers. According to a comparison of the corresponding genetic indices in the three quail populations, such as Polymorphism Information Content (PIC), Mean Heterozygosity ($\bar{H}$) and Fixation Index, wild Common quail possessed rich genetic diversity with 4.67 alleles per site. Its values for PIC and $\bar{H}$ were the highest, 0.5732 and 0.6621, respectively. Domestic quail had the lowest values, 0.5467 and 0.5933, respectively. Wild Japanese quail had little difference in genetic diversity from domestic quail. In addition, from analyses of the fuzzy cluster based on standard genetic distance, the similarity relationship matrix coefficient between wild Japanese quail and domestic quail was 0.937, and that between wild Common quail and domestic quail was 0.783. All of these results showed that the wild Japanese quail were closer to the domestic quail for phylogenetic relationship than wild Common quail. These results at the molecular level provide useful data about quail's genetic background and further supported the hypothesis that the domestic quail originated from the wild Japanese quail.

낙동강하구에서의 미생물 다양성과 환경변화에 따른 내성한계 (Variations of diversity and tolerance indicies of heterotrophic bacterial communities in Naktong estuary)

  • 권오섭;하영칠;홍순우
    • 미생물학회지
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    • 제25권3호
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    • pp.229-237
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    • 1987
  • To determine the characteristics of heterotrophic bacterial community in estuarine ecosystem, water and sediment samples were taden from Naktong estuary. All isolates were compared with 73 characters and described by cluster analysis. With same characters, 30 reference strains were able to divide into approximate species level at 80% similarity (S value). Diversity indices ($H^{1}$) of sediment column isolates were higher than water column isolates. The bacterial community commonly appeared in water and sediment column was reduced with going to downstream. Tolerance indices for temperature (Pt) and salinity (Ps) were also higher in sediment isolates than in water isolates. The bacterial community in sediment column is believed to be composed with diverse populations compared to water column and maintains its stability against various environmental changes with high physiological tolerances.

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Effects of Acidification on the Changes of Microbial Diversity in Aquatic Microcosms

  • Young-Beom Ahn;Hong-Bum Cho;Byung Re Min;Yong-Keel Choi
    • Animal cells and systems
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    • 제3권2호
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    • pp.153-159
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    • 1999
  • In an artificial pH-gradient batch culture system, the effects of acidification on the species composition of a heterotrophic bacterial community were analyzed. As a result of this study, it was found that total bacteria numbers were not affected by acidification and that the population of hetero-trophic bacteria decreased as pH became lower. The heterotrophic bacteria isolated from the entire pH gradient were 12 genera and 22 species. Among them, 64% were gram negative and 36% were gram positive bacteria. As pH decreased, the distribution rate of gram negative bacteria increased while that of gram positive bacteria decreased. The diversity of genera decreased from 13 to 5 as pH decreased from 7 to 3. The G+C content of all of the 202 isolated strains varied from 22.8 to 77.0%, and increased in interspecies of same genus as pH decreased. As a result of clustering analysis, the diversity index of species ranged from 1.13 to 2.37, and it had lower indices as pH decreased. In order to evaluate the diversity of numbers of sample of different size, a rarefaction method was used to analyze the expected number of species appearance according to pH. The statistical significance of species diversity was verified by the fact that the number decreased at lower pH.

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낙동강 상류 수계의 어류 군집 구조 분석 및 생태건강도 평가 (Fish Community Structure Analysis and Ecological Health Assessments in the Headwater Watershed of Nakdong River)

  • 이재훈;홍영표;안광국
    • 생태와환경
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    • 제40권3호
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    • pp.403-411
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    • 2007
  • 본 연구는 낙동강의 최상류 8개 지점을 대상으로 1999년 $6{\sim}8$월까지 어류군집을 이용한 전통적인 종다양도 지수(H')와 IBI 지수를 통한 생태 건강도 평가를 비교하였다. 채집된 총 종수는 19종이었고, 우점종은 갈겨니와 버들치로써 각각 51%, 28%를 차지하였다. 트로픽 길드 분석에 따르면, 전체 채집된 종에서 충식종이 87%였고, 잡식종의 빈도는 극히 낮게 나타났다. 종다양도 지수에 의한 공간적인 변이의 패턴은 종수와 개체수의 패턴과 유사했지만, 내성도 및 트로픽길드 자료에 의한 패턴과는 상당한 차이를 보였다. 종다양도 지수는 지점 6에서 1.56으로 최대치를 보였으며, 민감종과 내성종은 각각 최소, 최대값을 보였다. 한편, 지점 6에서 충식종과 잡식종이 각각 최소, 최대치를 보였다. 즉 종다양도 지수는 내성도 길드 및 트로픽 길드의 패턴과 어떤 유사성도 없으며, 전통적인 지수는 수계내에서의 어류군집의 전반적인 생태학적 특성들을 잘 반영할 수 없었다. 한편, 생태건강도 (IBI)의 평균 모델값은 33.5(n=8)로써 보통${\sim}$양호상태로 나타났고, 트로픽 길드 및 내성도 길드의 패턴과 유사하게 나타났다. 민감종과 충식종이 거의 최대치를 보인 2지점에서 IBI간은 최대치를 보였으며, 동일지점에서 내성종과 잡식종의 빈도는 최저치를 보였다. 이런 결과는 IBI 값이 생태학적인 기능과 건강상태에 밀접히 연관되어 있다는 것을 제시하는 바이다. 본 연구에서 전통적인 종 다양도 지수는 어류를 이용한 생태건강도 군집평가에 비효율적인 반면, IBI를 이용한 접근방식은 하천구조를 잘 진단할 수 있는 유용한 척도가 될 수 있음을 시사하는 바이다.

Characteristics of species richness and diversity of woody vegetation in the natural rivers in Korea and its meaning to restoration design in flood plains

  • Bang, Je-Yong;Hu, Un-Bok;Kim, Hyea-Ju;You, Young-Han
    • 한국환경생태학회지
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    • 제29권1호
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    • pp.62-68
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    • 2015
  • In order to get basic data for flood plain restoration, we surveyed the woody vegetation in Korean natural rivers and analyzed the species' characteristics with regards to patterns of richness and diversity. These characteristics were higher in hard wood forests than those in soft wood forests, such as Salix spp. community. Futhermore, they were the highest in the Prunus sargentii-Pinus densiflora community(H' 1.095), and the lowest in the Carpinus laxiflora community(H' 0.118) among the hard wood forests. Species' richness diversity were the highest in the Salix gracilistyla community, but the lowest in the S. koriyangi community or S. koreensis community among the soft wood forests. With regards to the dominant index, just one community is over 0.9, 13 communities are between 0.3-0.7 and 15 communities are less than 0.3. The Salix koreensis community was the highest at 0.931, and Prunus sargentii-Pinus densiflora community was the lowest at 0.13. Species' richness and diversity was significantly correlated with tree layer coverages and degree of slope. These results mean that in order to increase plant species diversity in flood plains planted hard woody trees, such as oaks and fir, are needed to suit environmental conditions with steeper slope and lower canopy coverage.

충청북도 미동산수목원의 자생 초본군락 구조 및 관리방안 (Structure and Management Plan of the Spontaneous Herbaceous Communities in Midongsan Arboretum, Chungcheongbuk-do)

  • 유주한;정성관
    • 한국조경학회지
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    • 제33권2호
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    • pp.48-59
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    • 2005
  • The purpose of this study was to examine the ecological characteristics of herbaceous communities by systematic and scientific analysis of their structure and diversity in the Midongsan Arboretum and to offer raw data for a long-tenn monitoring study. The importance value and diversity index of species appearing in twenty plots from July to September, 2004 were analyzed and a management plan for these communities is presented. Vascular plants were represented by 60 taxa of 23 families, 51 genera, 50 species and 10 varieties. Based on the results of importance value analysis, the most dominant species was Artemisia princeps var. orientalis, followed by Setaria viridis and Erigeron canadensis. The diversity index analysis showed that plot no. 5 had the highest H' and H'_{max}$(2.0135 and 2.6391). It's species composition was comparatively more diverse and it's structure more stable than other plots. Artemisia montana and Dactylis glomerata showed the highest correlation between species. Because herbaceous communities are important biological habitats and provide important function in environmental conservation, it is important to properly preserve these communities. At the same time, in order to preserve genetic resources and improve spatial function, it may be necessary to consider removing herbaceous communities in certain areas. In the future, the relations between physicochemical soil properties and herbaceous communities should be examined and community movement should be studied.