• Title/Summary/Keyword: Dimerization

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Thermodynamic Analysis on the Hydrolysis Reaction of Vinylsulfonyl Reactive Dyes (VS계 반응염료 가수분해반응의 열역학적 해석)

  • Gwon, Hyeok-Seong;Jeon, Yeong-Sil;Nam, Seong-U;Kim, In-Hoe
    • Proceedings of the Korean Society of Dyers and Finishers Conference
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    • 2008.04a
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    • pp.74-76
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    • 2008
  • The hydrolyses of ten VS dyes were examined at 40$^{\circ}C$, 50$^{\circ}C$, and 60$^{\circ}C$ and the kinetic parameters were estimated. The values of free energy, enthalpy and entropy of hydrolysis and reaction with cellulose for VS dyes were calculated. The linear relationship exist between the enthalpy and entropy. The structure and entropy of VS dyes gave a effect on the dimerization for VS reactive dyes. The VS dyes have small value of entropy were formed dimer. It was confirmed that no dimer form for m-substituted VS dyes. There were similarities among various reactions including homo- and mixed dimerization.

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Dimerization Behavior of Cinnamate Group attached to Flexible Polymer Backbone and Its Application to Liquid Crystal Alignment

  • Sung, Shi-Joon;Cho, Ki-Yun;Hah, Hyun-Dae;Kim, Won-Sun;Jeong, Yong-Cheol;Park, Jung-Ki
    • 한국정보디스플레이학회:학술대회논문집
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    • 2004.08a
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    • pp.1163-1166
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    • 2004
  • Cinnamate group is well-known for the dimerization reaction by ultra-violet irradiation and cinnamate polymers are studied for photo-alignment materials. The cinnamate groups of flexible polymer are found to produce LC alignment parallel to polarization direction of ultra-violet light, which is contrary to the LC orientation on conventional cinnamate polymers. The un-reacted cinnamate groups in the flexible polymer are also found to participate in cycloadducts formation by additional thermal reaction that preserves the orientation of cycloadducts, leading to the enhancement of thermal stability of LC alignment.

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Ligand Recognition by the Toll-like Receptor Family

  • Jin, Mi-Sun;Lee, Jie-Oh
    • Animal cells and systems
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    • v.13 no.1
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    • pp.1-8
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    • 2009
  • Toll-like receptor (TLR) family proteins, type I transmembrane proteins, play a central role in human innate immune response by recognizing common structural patterns in diverse molecules from bacteria, viruses and fungi. Recently four structures of the TLR and ligand complexes have been determined by high resolution x-ray crystallographic technique. In this review we summarize reported structures of TLRs and their proposed activation mechanisms. The structures demonstrate that binding of agonistic ligands to the extracellular domains of TLRs induces homo- or heterodimerization of the receptors. Dimerization of the TLR extracellular domains brings their two C-termini into close proximity. This suggests a plausible mechanism of TLR activation: ligand induces dimerization of the extracellular domains, which enforces juxtaposition of intracellular signaling domains for recruitment of intracellular adaptor proteins for signal initiation.

Peroxidase-mediated Formation of the Fungal Polyphenol 3,14'-Bihispidinyl

  • Lee, In-Kyoung;Yun, Bong-Sik
    • Journal of Microbiology and Biotechnology
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    • v.18 no.1
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    • pp.107-109
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    • 2008
  • Medicinal fungi, Phellinus linteus and Inonotus xeranticus, produce a cluster of yellow pigment in their fermentation broth that acts as an important element of biological activity. The pigment is composed of diverse polyphenols with a styrylpyrone moiety, mainly hispidin and its dimers, 3,14'-bihispidinyl, hypholomine B, and 1,1-distyrylpyrylethan. Although dimeric hispidins were proposed to be biosynthesized from two molecules of monomer via oxidative coupling by ligninolytic enzymes, laccase and peroxidase, the details of this process remain unknown. In this preliminary study, we attempted to achieve enzymatic synthesis of the hispidin dimer from hispidin by using commercially available horseradish peroxidase (HRP). Consequently, a hispidin dimer, 3,14'-bihispidinyl, was synthesized, whereas the other dimers, hypholomine B and 1,1-distyrylpyrylethan, were not produced. This result suggested that the oxidative coupling at the C-3 and C-14' positions of hispidins was dominant in the process of dimerization by HRP, and indicated that additional catalysts or substrates would be needed to synthesize other hispidin dimers present in the fungal metabolite.

Simulation of Diamond (100) and (110) Surface Structure and Surface Energy (Diamond(100) 및 (110) 표면구조와 표면에너지의 시뮬레이션)

  • 이종무
    • Journal of the Korean Vacuum Society
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    • v.3 no.3
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    • pp.269-274
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    • 1994
  • Tersoff 포텐셜을 사용한 에너지 최소화테크닉에 의하여 컴퓨터 시뮬레이션함으로써 다이아몬드 (100)과 (110) 표면의 구조와 표면에너지를 구하였다, 다이아몬드(100)면과 (110)면의 reconstruction pattern 은 각각 (1$\times$1)과 (2$\times$1)이며 표면에너지는 각각 6,671.3 erg/cm2 와 4,032.0 erg/cm2 인 것으로 계산되었다 (100)면의 surface reconstruction 은 첫 번째 원자층과 두 번째 원자층간의 간격이 [100] 방 향으로 수축되는 것으로 나타났다. 한편 (110)면의 surface reconstruc-tion은 주로 첫 번째 원자층에서 의 원자들은 [001] 방향으로 dimerization 한는 것과 첫 번째 원자층과 두 번째 원자층간의 간격이 [110] 방향으로 dimerization 하는 것과 첫 번째 원자층과 두 번째 원자층간의 간격이 [110] 방향으로 수축되 는 것으로 나타났다. 그밖에 표면의 각 원자층의 stress 성분들이 구해졌으며 그것들이 표면흡착에 미치 는 효과 등이 토의되었다.

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Intercellular Adhesion Molecule-1 (ICAM-1)의 분자구조와 기능

  • 전창덕
    • The Zoological Society Korea : Newsletter
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    • v.18 no.2
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    • pp.33-37
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    • 2001
  • Intercellular adhesion molecule-1 (ICAM-1)은 T 세포의 활성이나 면역세포가 염증작용이 일어나고 있는 곳으로 옮겨갈 때 중요한 역할을 수행하는 당단백질 (glycoprotein)으로서 2-integrin 계열의 분자인 leukocyte function associated antigen-1(LFA-1)이나 Mac-1의 수용체이며 세포의 막에 homodimer인 상태로 발현되어진다. ICAM-1은 5개의 세포외 domain과 transmembrane domain(TM) 및 짧은 cytoplasmic domain을 갖고 있으며, dimerization motif는 domain 5 또는 TM인 것으로 알려져 있다. 최근의 crystal 구조분석 결과에 의하면 domain 1에도 dimerization motif가 있는 것으로 추정되어지지만 정확한 실험적인 뒷받침이 되어져 있지 않다. 본 연구에서는domain 1에 dimer를 형성할 수 있는 motif가 존재하는 지에 대한 실험적인 증명과 함께 ICAM-1이 세포의 막에서 어떠한 구조를 갖고 있는지에 대한 최근의 연구성과를 보고하고자 한다.

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Structural basis of Shank PDZ interaction with the C-terminal peptide of GKAP protein and the mode of PDZ domain dimerization

  • Im, Young-Jun;Lee, Jun-Hyuck;Park, Seong-Ho;Park, Seong-Hwan;Park, Soo-Jeong;Kang, Gil-Bu;Kim, Eunjoon;Eom, Soo-Hyun
    • Proceedings of the Korea Crystallographic Association Conference
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    • 2003.05a
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    • pp.14-14
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    • 2003
  • We have crystallized and determined the structures o the Shank PDZ domain, alone and in complex with the synthetic C-terminal hexapeptide of GKAP protein at resolutions of 1.8Å and 2.5Å, respectively. The structure revealed the structural basis of the ligand recongition by Class I PDZ-ligand interaction. Moreover, dimeric structureof shank PDZ domain suggests that the βA strand is a common surface for dimerization of PDZ domains.

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Effective Separation Method of NBD Dimer Mixture (NBD 이량체 생성물의 효율적 분리방법)

  • Jeong, Byung-Hun;Han, Jeong-Sik;Min, Seong-Ki;Lim, Jin-Shik
    • Proceedings of the Korean Society of Propulsion Engineers Conference
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    • 2010.11a
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    • pp.797-799
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    • 2010
  • In preparation of NBD dimer, one of the industrially useful multicyclic hydrocarbon compound, various catalyst, solvent and byproducts were included in reaction product at the end of dimerization reaction. In order to increase the yield of NBD dimer mixture, first of all, effective separation process development was required. The research for improvement of NBD dimer yield were performed by use of eco-friendly and recyclable separation solvent.

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The Influence of Simple Electrolyte on the Behaviour of Some Acid Dyes in Aqueous Media

  • M. M. El-Fass;N. A. Badawy;A. A. El-Bayaa;N. S. Moursy
    • Bulletin of the Korean Chemical Society
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    • v.16 no.5
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    • pp.458-461
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    • 1995
  • The influence of adding counter-ion such as Na+ on the dimerization of the two sulphonated azo dyes, C.I. Acid Red 14 and C.I. Acid Red 17 in aqueous media has been studied spectrophotometrically. The observed hypochromic effect on increasing the amount of salt has been described. The dye concentration range where the dimerization equilibrium is applicable was chosen. No metachromatic behaviour was observed on changing the dye concentration and the amount of salt. This behaviour was attributed to the ability of the counter-ion to disrupt the structure of water as well as reducing the electrostatic repulsion forces between dye anions which will lead to the increase of aggregation tendency of the dye species.

The Spectroscopic Studies on the Aggregation Behavior of Cyanine Dyes

  • 민형식;박정희;유종완;김동호
    • Bulletin of the Korean Chemical Society
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    • v.19 no.6
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    • pp.650-654
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    • 1998
  • Aggregations of 1,1'-diethyl-2,2'-carbocyanine iodide (DCI) and 1,1'-diethyl-2,2'-dicarbocyanine iodide (DDT) in aqueous solution have been investigated by the steady-state absorption spectroscopy. The equilibrium constants for dimerization of DCI and DDT are found to be $(9.8{\pm}0.5){\times}10^4 \;and\; (1.6{\pm}0.5){\times}10^5\; M^{-1}$, respectively, at 293 K. The enthalpy changes for the dimerization of DCI and DDT are -6.7±0.7 and -7.7±0.8 kcal/mol, respectively. The results show that the dispersion force plays an important role in the aggregation of DCI and DDT in aqueous solution. The absorption bandwidth of DCI/ethanol system has been measured as a function of temperature, providing the evidence for no strong interaction between DCI and solvent molecules. The participation of hydrophobic force in driving the aggregation is suggested. For the first time, DCI in aqueous solution is found to form a new aggregate which has both J- and H- bands.