• Title/Summary/Keyword: Combinatorial

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Enhancing the Solubility of Recombinant Akt1 in Escherichia coli with an Artificial Transcription Factor Library

  • Park Kyung-Soon;Lee Ho-Rim;Kim Jin-Soo
    • Journal of Microbiology and Biotechnology
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    • v.16 no.2
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    • pp.299-302
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    • 2006
  • A combinatorial library of artificial transcription factors (ATFs) was introduced into the bacterial cells that expressed the Akt1-GFP fusion protein. By measuring the level of fluorescence generated by the transformed E. coli cells, we were able to obtain clones in which ATFs increased the solubility of the Akt1. Our results show that ATF library is a useful tool for increasing the solubility of selected recombinant proteins in E. coli.

JACOBI-TRUDI TYPE FORMULA FOR PARABOLICALLY SEMISTANDARD TABLEAUX

  • KIM, JEE-HYE
    • The Pure and Applied Mathematics
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    • v.22 no.3
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    • pp.245-261
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    • 2015
  • The notion of a parabolically semistandard tableau is a generalisation of Young tableau, which explains combinatorial aspect of various Howe dualities of type A. We prove a Jacobi-Trudi type formula for the character of parabolically semistandard tableaux of a given generalised partition shape by using non-intersecting lattice paths.

A Bid Selection Heuristic for Combinatorial Auction (조합 경매에서의 비드 선택 휴리스틱)

  • 송진우;양성봉
    • Proceedings of the Korean Information Science Society Conference
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    • 2002.10d
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    • pp.283-285
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    • 2002
  • 조합 경매는 구매자들이 원하는 상품들을 조합해서 입찰할 수 있는 경매다. 그러나 판매자의 이익을 최대로 하는 승자를 결정하는 문제는 NP-complete이다. 분기 한정법(branch and bound)을 사용해서 최적의 승자를 찾을 때, 어떤 비드(bid)를 선택해서 분기할 것인가를 결정해야 한다. 이 때, 비드를 선택하는 휴리스틱이 분기 한정법의 성능을 결정하는 중요한 역할을 한다. 본 논문에서는 조합경매의 승자를 결정하기 위해서 분기 한정법과 Linear Programming을 사용할 때, 분기할 비드와 충돌하는 비드들을 동시에 고려하는 비드 선택 휴리스틱을 제안한다. 실험을 통해서 제시하는 휴리스틱의 성능이 우수함을 보였다.

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혼합 유전알고리즘을 이용한 비선형 최적화문제의 효율적 해법

  • 윤영수;이상용
    • Journal of Korea Society of Industrial Information Systems
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    • v.1 no.1
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    • pp.63-85
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    • 1996
  • This paper describes the applications of genetic algorithm to nonlinear constrained optimization problems. Genetic algorithms are combinatorial in nature, and therefore are computationally suitable for treating continuous and idstrete integer design variables. For several problems , the conventional genetic algorithms are ill-defined , which comes from the application of penalty function , encoding and decoding methods, fitness scaling, and premature convergence of solution. Thus, we develope a hybrid genetic algorithm to resolve these problems and present two examples to demonstrate the effectiveness of the methodology developed in this paper.

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A New Heuristic Algorithm for Traveling Salesman Problems (외판원문제에 대한 효율적인 새로운 경험적 방법 개발)

  • 백시현;김내헌
    • Journal of Korean Society of Industrial and Systems Engineering
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    • v.22 no.51
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    • pp.21-28
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    • 1999
  • The TSP(Traveling Salesman Problem) is one of the most widely studied problems in combinatorial optimization. The most common interpretation of TSP is finding a shortest Hamiltonian tour of all cities. The objective of this paper proposes a new heuristic algorithm MCH(Multi-Convex hulls Heuristic). MCH is a algorithm for finding good approximate solutions to practical TSP. The MCH algorithm is using the characteristics of the optimal tour. The performance results of MCH algorithm are superior to others algorithms (NNH, CCA) in CPU time.

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A NOTE ON PASCAL'S MATRIX

  • Cheon, Gi-Sang;Kim, Jin-Soo;Yoon, Haeng-Won
    • The Pure and Applied Mathematics
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    • v.6 no.2
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    • pp.121-127
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    • 1999
  • We can get the Pascal's matrix of order n by taking the first n rows of Pascal's triangle and filling in with 0's on the right. In this paper we obtain some well known combinatorial identities and a factorization of the Stirling matrix from the Pascal's matrix.

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FPTAS and pseudo-polynomial separability of integral hull of generalized knapsack problem

  • Hong Sung-Pil
    • Proceedings of the Korean Operations and Management Science Society Conference
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    • 2004.10a
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    • pp.225-228
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    • 2004
  • The generalized knapsack problem, or gknap is the combinatorial optimization problem of optimizing a nonnegative linear functional over the integral hull of the intersection of a polynomially separable 0 - 1 polytope and a knapsack constraint. Among many potential applications, the knapsack, the restricted shortest path, and the restricted spanning tree problem are such examples. We prove via the ellipsoid method the equivalence between the fully polynomial approximability and a certain pseudo-polynomial separability of the gknap polytope.

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An Algorithm for Calculating Flow-based Network Survivability (흐름량을 고려한 네트워크 생존도 계산방법에 관한 연구)

  • 명영수;김현준
    • Journal of the Korean Operations Research and Management Science Society
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    • v.26 no.3
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    • pp.65-77
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    • 2001
  • Survivability of a network is one of the most important issues in designing present-day communication networks. the k-edge survivability of a given network is defined as the percentage of total traffic surviving the worst case failure of k edges. Although several researches calculated k-edge survivability on small networks by enumeration, prior research has considered how to calculate k-edge survivability on large networks. In this paper, we develop an efficient procedure to obtain lower and upper bounds on the k-edge survivability of a network.

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General Set Covering for Feature Selection in Data Mining

  • Ma, Zhengyu;Ryoo, Hong Seo
    • Management Science and Financial Engineering
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    • v.18 no.2
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    • pp.13-17
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    • 2012
  • Set covering has widely been accepted as a staple tool for feature selection in data mining. We present a generalized version of this classical combinatorial optimization model to make it better suited for the purpose and propose a surrogate relaxation-based procedure for its meta-heuristic solution. Mathematically and also numerically with experiments on 25 set covering instances, we demonstrate the utility of the proposed model and the proposed solution method.

Inverse Bin-Packing Number Problems: Polynomially Solvable Cases

  • Chung, Yerim
    • Management Science and Financial Engineering
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    • v.19 no.1
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    • pp.25-28
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    • 2013
  • Consider the inverse bin-packing number problem. Given a set of items and a prescribed number K of bins, the inverse bin-packing number problem, IBPN for short, is concerned with determining the minimum perturbation to the item-size vector so that all the items can be packed into K bins or less. It is known that this problem is NP-hard (Chung, 2012). In this paper, we investigate some special cases of IBPN that can be solved in polynomial time. We propose an optimal algorithm for solving the IBPN instances with two distinct item sizes and the instances with large items.