• Title/Summary/Keyword: Botany

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A Functional Analysis of OsCPK11, a Calcium-dependent Protein Kinase (CDPK) Gene in Rice (벼의 칼슘-의존성 단백질 카이네즈 유전자인 OsCPK11의 기능적 분석)

  • Lee, Su-Hee;Lee, Jeong-Eun;Day, Philip;Gilroy, Simon;Kim, Sung-Ha
    • Journal of Life Science
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    • v.27 no.11
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    • pp.1233-1244
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    • 2017
  • CDPKs have pivotal roles in plant $Ca^{2+}$-mediated transduction signaling. A total of 29 CDPK genes have been identified in rice (Oryza sativa L.), but their key functions have not been completely noted. This study focused on the OsCPK11 gene, which has not been studied, to determine its functional characteristics. A study of tissue-specific expressions revealed that the OsCPK11 gene is expressed in young leaves, mature leaves and flowers of rice. An expression of the gene was also confirmed in gibberellin-treated aleurone layers of rice. Regarding the phenotypic characteristics of Tos17-inserted OsCPK11 mutants, the heights of the mutants were not distinguishable from the heights of wild type plants, but the number of caryopses and the caryopses' weights were significantly statistically different. In addition, many grains of the mutants had white belly materials in their endosperm. The cDNA of the OsCPK11 was cloned, and an OsCPK11 protein of about 60.5 kD was obtained by using a GST affinity chromatography and an SDS-PAGE. An analysis of the amino-acid sequence of the protein indicated that the OsCPK11 protein has the structural characteristics of typical CDPKs. The results provided useful information about the functions of the OsCPK11 gene and further noted the roles CDPKs have in $Ca^{2+}$-mediated signaling in plants.

SOME PHYSIOLOGICAL STUDIES ON THE UTILIZATION OF ORGANIC SUBSTRATES BY EUGLENA GRACILIS VAR. BACILLA 10616 IN LIGHT AND IN DARKNESS ("유-그레나"의 명암배양에 따르는 유기질의 이용과 호흡 및 생장에 대하여)

  • Lee, Min-Jai
    • Journal of Plant Biology
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    • v.2 no.1
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    • pp.1-12
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    • 1959
  • 1) The comparative studies of the quantitative measurement of growth characteristics and utilization of substrates by Euglena gracilis var. bacilla 10616 in the light and in darkness have been carried out. Eodogenous respiration, effect of respiratory inhibitors and responses to the added substrates for the exogenous respiration are also investigated. 2) All cultures are grown in the open air under the continuous illumination of fluorescent light of 3500 lux at room termperature, the growth rate of the culture in the basal medium added 0.5% lactate is found to be the highest. The growth rate decreases successively for the cultures of 0.5% sucinate, 0.5% Na-acetate, 0.5% malate, and control. There is no growth in the basal meidum added 0.5% butyrate and 0.5% hydroquinone. The similar results are obtained for the mentioned cultures in the darkness. However, the growth rate in basal medium added 0.5% glucose and 0.5% sucrose does seem to increase in the darkness unlike the illumination. 3) The endogenous rate of respiration for the organism cultured photosynthetically is about 12.94ul 02/mg/hr, in basal medium and the respiratory quotient is about 0.84. The rate is decreased by starvations to 6.5ul 02/mg/hr, about to a half, but the respiratory quotient does net change. 4) The oxygen consomption during initial 2 hours in suspending solution ranging from pH 4.5 to pH 9.3 is highest at pH 4.5 in which the algae had grown, at pH 5.5 and at pH 6.9. 5) Endogenous respiration of the cells is strongly inhibited by 0.1M of potassium cyanide, malomic acid, sodium fluoride and iodo-acetic acid. It is also strongly inhibited by 0.01M of potassium cyanide. 6) The respiratory response to added substrates for the exogenous respiration in the organism is coincided with the rate in the basal medium added the substrate in light and in darkness, whether the cells are fed or starved. 7) According to the results of this study, there seems to be the flexibility of the interconversion between photosynthesis and chemosynthesis, heterotropic mode of metabolism, in Euglena gracilis var. bacillaris, and that this organism utilizes the lactate most. It also may be suggested that the enayme systems linked in the each steps of Embden-Myerhof-Parnas path way and TCA cycle seem to exist in this organism.

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Asexual Stage and Fruit Formation of Cordyceps staphylinidaecola (유충노랑곰보동충하초(Cordyceps staphylindaecola)의 불완전세대와 자실체 형성)

  • Sung, Jae-Mo;Hong, Sung-Jun;Humber, R.A.;Spatafora, J.W.
    • The Korean Journal of Mycology
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    • v.31 no.1
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    • pp.1-7
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    • 2003
  • One hundred fifty one specimens of Beauveria spp. from 19 different locations were collected from September 1 to August 31, 2002. Most of the isolates were identified as Beauveria. bassiana. Cordyceps staphylinidaecola collected from Mt. Obong in Chunchon City covered the host with mycelia which were produced 1 to 4 stromata along with asexual spores. The size of bright yellow ununiform stromata were about 45 mm and the head about $17mm{\times}4mm$. Perithecia completely immersed were $530{\sim}550{\times}290{\sim}300{\mu}m$ in size and mainly scattered on the head. Ascospore produced in asci in the size of $400{\sim}450{\times}4{\sim}5{\mu}m$ developed thread-like secondary spores, which were directly separated into secondary conidial spores. Conidia produced at apical portion of synnemata were $2.6{\sim}3.4{\times}1.2{\sim}1.9{\mu}m$ in size. High density of mycelium was observed at $25^{\circ}C$ ranged from pH 6.5 to 8.5 after 11 days of inoculation. It took 15 to 18 days after inoculation to fully grow on the medium mixed brown rice with pupa. Mycelium developed stromata on the medium 30 days after completion of mycelial growth, where perithecia were produced in 40 days.

Genetic Analysis of the Life Cycle in Interspecific Hybrids of Pleurotus ostreatus and Pleurotus florida Following Protoplast Fusion (원형질 체융합에 의한 느타리버섯과 사철느타리버섯 체세포 잡종의 유전 분석)

  • Yoo, Young-Bok;You, Chang-Hyun;Park, Yong-Hwan;Peberdy, John F.
    • The Korean Journal of Mycology
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    • v.14 no.1
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    • pp.9-15
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    • 1986
  • Interspecific hybrids of Pleurotus ostreatus and Pleurotus florida were formed by using protoplasts of complementing auxotrophs. The genetic markers were shown to segregate and recombine in the first generation of monosporus isolates from basidiocarp of seven fusion products. The analysis provides proof of heterokaryosis and strong evidence for haploidy of vegetative nuclei, a sexual cycle consisting of nuclear fusion and meiosis. In all the crosses there was no evidence of linkage between the genetic markers. Clamp connections were formed in monosporus mycelia from basidiocarp of fusion products.

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Studies on the Productive Structure and the Productivity of × Populus albaglandulosa Plantation (은수원사시나무의 조림지(造林地)의 생산구조(生産構造)와 생산성(生産性))

  • Kim, Joon Ho;Sun, Soon Hwa;Lee, Suk Koo;Kim, Chung Suk
    • Journal of Korean Society of Forest Science
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    • v.35 no.1
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    • pp.9-14
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    • 1977
  • The productive structure and the productivity of ${\times}$Populus albaglandulosa plantations, where are middle parts of the Korean peninsula, were studied by means of stratifying clip technique and of allometry. The densities of stands in the sample areas were 693 trees/ha in 6 year-old plantation and 527 or 625 trees/ha in 9 year-old one. The photosynthetic part of the productive structure was not shown normal conical form but layering. So this was efficient to transmit solar radiation into the stand floor. The standing crop of the terrestrial parts of 6 year-old plantation was 18.11 ton/ha and that of 9 year-old one 38.8 to 47.3 ton/ha. The wood volume to trunk to 6 year-old was $31.3m^3/ha$ and that of 9 year-old was 68.8 to $83.9m^3/ha$. The annual net production of 6 year-old plantation was 4.8 ton/ha/year and that of 9 year-old one was 10.0 to 11.7 ton/ha/year and its wood volume of trunks was 17.9 to $21.1m^3/ha/year$. In the 9 year-old plantation the standing crop or the annual net production was different between two sample areas. This seemed that the cause was not due to chemical character but to physical character of soil.

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Ecological Indicators of Forest Degradation after Forest Fire and Clear-cutting in the Siberian Larch (Larix sibirica) Stand of Mongolia

  • Park, Yeong Dae;Lee, Don Koo;Stanturf, John A.;Woo, Su Young;Zoyo, Damdinjav
    • Journal of Korean Society of Forest Science
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    • v.98 no.5
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    • pp.609-617
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    • 2009
  • This study was conducted to investigate ecological indicators of forest degradation after forest fire and clear-cutting in the Siberian larch (Larix sibirica Ledeb.) stand of Mongolia. The species abundance and biodiversity indices were higher in burned and clear-cut stands than those of reference stand, but boreal understory species, such as Vaccinium vitis-idaea, Pyrola incarnata, Linnea borealis and Maianthemum bifolium, completely disappeared and was replaced by sedge species, such as Carex duriuscula, C. lanceolata, C. pediformis, Poa attenuata and P. pratensis. During the research period, temperature increased by an average of $1.6^{\circ}C$ in burned stand and $1.7^{\circ}C$ in clear-cut stand compared to reference stand, but RH sharply decreased up to 15.7% in clear-cut stand. This result indicates that Larix sibirica stand became warmer and drier after forest fire and clear-cutting, and contributed to the abundance of sedge and grass species in the understory. Moreover, intense occupation of tall sedge grass after forest fire and clear-cutting had a vital role as obstacle on natural regeneration of Larix sibirica. The similarity of species composition between reference and burned stands was higher (73.6%) than between reference and clear-cut stands (63.8%). Soil moisture significantly decreased after forest fire and clear-cutting, and the extent of decrease was more severe in the clear-cut stand. The chemical properties at soil organic layer were significantly affected by forest fire and clear-cutting but not the mineral horizons. Inorganic nitrogen of the forest floor significantly decreased in the clear-cut stand ($1.1{\pm}0.4mg{\cdot}kg^{-1}$) than that of the burned ($4.5{\pm}2.3mg{\cdot}kg^{-1}$) and reference stands ($5.0{\pm}2.3mg{\cdot}kg^{-1}$). Available P of the forest floor significantly increased after fire, whereas it decreased after clear-cutting. These results indicate that existence of boreal understory vegetation, and changes in soil moisture and available P are distinct attributes applicable as ecological indicators for identifying forest degradation in Mongolia.

Chemical and bioactive comparison of flowers of Panax ginseng Meyer, Panax quinquefolius L., and Panax notoginseng Burk.

  • Li, Fang;Lv, Chongning;Li, Qiao;Wang, Jing;Song, Dan;Liu, Pengpeng;Zhang, Dandan;Lu, Jincai
    • Journal of Ginseng Research
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    • v.41 no.4
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    • pp.487-495
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    • 2017
  • Background: Although flowers of Panax ginseng Meyer (FPG), Panax quinquefolius L. (FPQ), and Panax notoginseng Burk. (FPN) have been historically used as both medicine and food, each is used differently in practice. Methods: To investigate the connection between components and enhancing immunity activity of FPG, FPQ, and FPN, a method based on a rapid LC coupled with quadrupole time-of-flight MS and immunomodulatory activity study evaluated by a carbon clearance test were combined. Results: According to quantitative results, the ratio of the total content of protopanaxatiol-type ginsenosides to protopanaxadiol-type ginsenosides in FPN was 0, but ranged from 1.10 to 1.32 and from 0.23 to 0.35 in FPG and FPQ, respectively. The ratio of the total content of neutral ginsenosides to the corresponding malonyl-ginsenosides in FPN ($5.52{\pm}1.33%$) was higher than FPG ($3.2{\pm}0.64%$) and FPQ ($2.39{\pm}0.57%$). The colorimetric analysis showed the content of total ginsenosides in FPQ, FPG, and FPN to be $13.75{\pm}0.60%$, $17.45{\pm}0.42%$, and $12.45{\pm}1.77%$, respectively. The carbon clearance assay indicated that the phagocytic activity of FPG and FPQ was higher than that of FPN. A clear discrimination among FPG, FPQ, and FPN was observed in the principal component analysis score plots. Seven compounds were confirmed to contribute strongly by loading plots, which may be the cause of differences in efficacy. Conclusion: This study provides basic information about the chemical and bioactive comparison of FPG, FPQ, and FPN, indicating that protopanaxtriol-type ginsenosides and malonyl-ginsenosides may play a key role in their enhancing immunity properties.

An Study on Plant Classification System as Described in the Science Textbook of Elementary and Secondary School (초.중등학교 과학교과서(생물영역)의 식물 분류 체계에 관한 연구)

  • Yeau, Sung-Hee
    • Journal of The Korean Association For Science Education
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    • v.18 no.4
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    • pp.635-641
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    • 1998
  • The purpose of this study was to suggest a new direction of learning method in botany based on the analysis of a classification system and concepts in Science(Biology) textbooks of elementary and secondary school. Elementary and secondary school textbooks of Biology have been analyzed for plant classification system and concepts. Findings are summarized as belows. 1. In textbook of elementary school, the organization of life is grouped into Plantae and Animalia. Learning contents of plant are divided by the size and habitat. However, this system of classification might cause false concepts. Therefore, learning contents should be organized as whether they are flowering plants or not. 2. In a textbook of middle school, the organization of life is grouped into Plantae and Animalia. For a textbook of high school, it is grouped into three kingdoms; Plantae, Animalia and Prorista. With the idea of new age of Life Science, we should change the standards to 5 kingdoms; Plantae, Animalia, Proristae, Fungi and Monera. Moreover, it would be desirable if the concept of plant classification could be explained with a general outline, not by an individual interpretation focusing on characters of species only. In addition to the above indications, a learning course should provide present a standard classification according to a cognitive developemental level. It also has to teach students how to classify plant, in secondary school. Learning materials focusing on algae of the present system, but should be organized based on Seed plants.

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Effects of Nitrogen and Phosphorus Fertilization on Ectomycorrhiza Development, N-Fixation and Growth of Red Alder Seedlings (질소(窒素)와 인산(燐酸) 시비(施肥)가 루브라 오리나무(Alnus rubra Bong.) 묘목(苗木)의 외생균근발달(外生菌根發達)과 질소고정(窒素固定) 및 생장(生長)에 미치는 영향(影響))

  • Koo, Chang-Duck;Molina, Randolph J.;Miller, Steven L.;Li, Ching Y.
    • Journal of Korean Society of Forest Science
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    • v.85 no.1
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    • pp.96-106
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    • 1996
  • Red alder(Alnus rubra Bong.) seedlings inoculated with Frankia only or both Frankia and spores of Alpova diplophloeus(Zeller & Dodge) Trappe & Smith were grown in a greenhouse for ten weeks. The ten-week-old seedlings were fertilized with six nitrogen(N) and phosphorus(P) fertility regimes (no fertilization, 10mM $NH_4NO_3$, 50mM $NH_4NO_3$, 5mM $KH_2PO_4$, 10mM $NH_4NO_3+5mM$ $KH_2PO_4$, and 50mM $NH_4NO_3+5mM$ $KH_2PO_4$) three times a week for ten weeks. The higher N-fertilization significantly increased mycorrhiza formation by greenhouse contaminant mycorrhizal fungi, but decreased N-fixation and P concentration in nodule tissues. P-fertilization significantly increased nodule and shoot dry weight, and P concentration in plant tissues. When N was highly fertilized, however, the P-fertilization effect disappeared in nodule P concentration but doubled in leaf P concentration. A. diplophloeus inoculation significantly increased diameter growth and $CO_2$ exchange rate, but decreased leaf dry weight. Our results suggest that the higher N- or P-fertilization affect nitrogenase activity and mycorrhizal development but the effects are changed by their interactions.

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Phylogenetic relationships of Coryloideae based on waxy and atpB-rbcL sequences (Waxy와 atpB-rbcL 염기서열 분석에 의한 Coryloideae의 계통 유연관계)

  • Yoo, Ki-Oug;Wen, Jun
    • Korean Journal of Plant Taxonomy
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    • v.38 no.4
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    • pp.371-388
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    • 2008
  • Phylogenetic studies were conducted for 35 populations of the subfamily Coryloideae (Betulaceae) based on waxy gene of nuclear DNA and atpB-rbcL intergenic spacer region of chloroplast DNA. Waxy data analysis suggest that Coryloideae is monophyletic; Corylus is monophyletic and basally branching within the subfamily Coryloideae; Ostryopsis is sister to the Carpinus and Ostrya clade, and the Ostrya is monophyletic (BS=86, PP=99). AtpB-rbcL intergenic spacer region analysis shows that Ostryopsis appeared as the most basal clade within the Coryloideae; Corylus is monophyletic(BS=98, PP=100) and placed between Carpinus-Ostrya and Ostryopsis clade; Carpinus and Ostrya formed a clade with a high support value(BS=100, PP=100). Carpinus sect. Carpinus is monophyletic, whereas sect. Distegocarpus is paraphyletic in the waxy tree. Corylus formed two subclades, but discordance at the infrageneric classification based on morphological characters. In the atpB-rbcL tree, Carpinus and Corylus taxa form a polytomy within the each clade. Results from the two data sets differ mainly in the relative position of Ostryopsis, the monophyly of Ostrya, and the relationships within the Carpinus-Ostrya clade. Further studies are needed for clarify the taxonomic position and the generic limitation.