• 유기물자원화
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• 제8권2호
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• pp.85-92
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• 2000

자연간석지 토양을 인공간석지에 인공간석지 토양을 자연간석지에 이식하고, 이식토양의 물리화학적 및 생물학적 특성의 변화를 추적하였다. 또한 실트함량과 유기물함량이 미생물현존량에 미치는 영향에 관해서 실내실험을 통하여 검토하였다. 자연간석지 토양을 인공간석지에 인공간석지 토양을 자연간석지에 이식한 결과, 실트함량, 유기물함량, 미생물현존량 및 토양중의 산화환원전위층은 시간의 경과와 함께 이식한 간석지의 토양구조와 동일하게 변이해 가는 것을 알았다. 또한 이식 토양중의 실트함량, 미생물현존량 및 유기물함량과는 높은 상관관계를 나타내었다. 실트함량 및 유기물함량의 증감과 함께 미생물현존량이 비례해서 증감하는 것을 알았다. 또한 실내실험 결과에서도 실트함량이나 유기물함량의 증가와 함께 미생물현존량이 증가하였다. 또한 그 원인은 실트함량이 증가함에 따른 결과라는 것을 알 수 있었다.

• The Plant Pathology Journal
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• 제26권3호
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• pp.238-244
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• 2010

Spatial and temporal distribution of Bacillus licheniformis N1 was investigated over time on the leaves, petioles and crowns of the strawberry plants. Bacterial population on the strawberry plants was quantified over time by selective plating. Bacterial population of N1 containing a plasmid pWH43G carrying green fluorescent protein (GFP) declined relatively faster on the plant surface as compared to the Strain N1 itself. However, this result was found to be enough to utilize the strain to visualize bacterial colonization on the plant surface. When B. licheniformis N1 was treated together with Silwet L-77 at 0.03%, the bacterial population on plant surface persisted for up to 7 days. B. licheniformis N1 (pWH43G) containing Silwet L-77 was applied on the strawberry plants and the GFP expressing bacteria were visualized by confocal laser scanning microscopy. Bacterial persistence was also investigated in a growth chamber and in a plastic house after N1 bioformulation treatment on the strawberry plant. The Strain N1 colonized three different tissues well and persisted over 3 to 5 days on the strawberry plants. They formed bacterial aggregates on plant surfaces for at least 3 days, resulting in a biofilm to resist fluctuating plant surface environment. However, the bacterial persistence dramatically declined after 7 days in all tested tissues in a plastic house. This study suggest that B. licheniformis N1 colonizes the strawberry plant surface and persists for a long time in a controlled growth chamber, while it can not persist over 7 days on the plant surface in a plastic house.

• 대한환경공학회지
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• 제28권7호
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• pp.764-769
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• 2006

미생물을 접종하지 않은 동전기 공정에서 전기분해에 의한 양극조에서 산소의 발생은 전류밀도에 비례하였으며 전해질을 순환시킴에 따라 생물반응기내 전해질과 함께 용존산소농도가 증가하였다. 전류의 공급과 함께 미생물 농도는 급격히 증가하였으며 이때 미생물의 산소소비량이 증가되어 용존산소농도가 감소되었다. Pentadecane-오염토양에 대한 동전기 생물학적 복원의 결과에서 높은 전류밀도 1.88 $mA/cm^2$에서 비록 산소의 발생량은 많았지만 오히려 증가된 유기산이 전해질 pH와 미생물 활성을 감소시키므로 미생물 농도와 제거효율이 0.63 $mA/cm^2$보다 낮게 나타났다. 0.63 $mA/cm^2$에서 적절한 산소의 공급과 동시에 전해액 pH의 감소가 작았으므로 최적의 미생물 농도와 제거효율을 얻을 수 있었다.

• Environmental Engineering Research
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• 제12권2호
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• pp.37-45
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• 2007

Phytoremediation has been used effectively for the biodegradation of oil-based contaminants, including diesel, by the stimulation of soil microbes near plant roots (rhizosphere). However, the technique has rarely been assessed for itsinfluence on soil microbial properties such as population, community structure, and diversity. In this study, the removal efficiency and characteristics of rhizobacteria for phytoremediation of diesel-contaminated soils were assessed using barnyard grass (Echinochloa crusgalli). The concentration of spiked diesel for treatments was around $6000\;mg\;kg^{-1}$. Diesel removal efficiencies reached 100% in rhizosphere soils, 76% in planted bulk soils, and 62% in unplanted bulk soils after 3weeks stabilization and 2 months growth(control, no microbial activity: 32%). The highest populations of culturable soil bacteria ($5.89{\times}10^8$ per g soil) and culturable hydrocarbon-degraders($5.65{\times}10^6$ per g soil) were found in diesel-contaminated rhizosphere soil, also yielding the highest microbial dehydrogenase. This suggests that the populations of soil bacteria, including hydrocarbon-degraders, were significantly increased by a synergistic rhizosphere + diesel effect. The diesel treatment alone resulted in negative population growth. In addition, we investigated the bacterial community structures of each soil sample based on DGGE (Denaturing Gel Gradient Electrophoresis) band patterns. Bacterial community structure was most influenced by the presence of diesel contamination (76.92% dissimilarity to the control) and by a diesel + rhizosphere treatment (65.62% dissimilarity), and least influenced by the rhizosphere treatment alone (48.15% dissimilarity). Based on the number of distinct DGGE bands, the bacterial diversity decreased with diesel treatment, but kept constant in the rhizosphere treatment. The rhizosphere thus positively influenced bacterial population density in diesel-contaminated soil, resulting in high removal efficiency of diesel.

• Asian-Australasian Journal of Animal Sciences
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• 제13권7호
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• pp.957-961
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• 2000

A series of experiments was conducted to evaluate phytin phosphohydrolysis actlVlty in the rumen and to isolate phytase positive rumen bacteria. Endogenous phytase activity of wheat bran was estimated and compared with that of bacterial phytin phosphohydrolysis. Substantial phytase activity was detected in wheat bran during in vitro rumen incubation. Bacterial phytase activity was suggested not to be high. Only two facultative anaerobes, Klebsiella sp. and Corynebacterium sp. were isolated as phytase producing organisms. These belonged to a minor microbial group in the rumen population. Protozoal fraction showed an initial velocity of phytin phosphohydrolysis 7 times higher than the bacterial fraction.

• 한국식물병리학회지
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• 제14권6호
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• pp.744-746
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• 1998

Control effect of acidified nutrient solution on bacterial wilt of tomato plants was tested by examining the degree of bacterial growth inhibition and plant damage due to the acidity. Ralstonia solanacearum, the causal bacterium of bacterial wilt of tomato plants, showed 105 times population reduction when the bacterium was cultured in the acidified nutrient solution (pH 3.5∼4.0). However, fruit yields were decreased only fifteen to twenty percents. These results suggest that control of the bacterial wilt of tomato plants may be possible with supplying acidified nutrient solution.

• The Plant Pathology Journal
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• 제35권4호
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• pp.362-371
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• 2019

Plant phenotype is affected by a community of associated microorganisms which requires dissection of the functional fraction. In this study, we aimed to culture the functionally active fraction of an upland soil microbiome, which can suppress tomato bacterial wilt. The microbiome fraction (MF) from the rhizosphere of Hawaii 7996 treated with an upland soil or forest soil MF was successively cultured in a designed modified M9 (MM9) medium partially mimicking the nutrient composition of tomato root exudates. Bacterial cells were harvested to amplify V3 and V4 regions of 16S rRNA gene for QIIME based sequence analysis and were also treated to Hawaii 7996 prior to Ralstonia solanacearum inoculation. The disease progress indicated that the upland MM9 $1^{st}$ transfer suppressed the bacterial wilt. Community analysis revealed that species richness was declined by successive cultivation of the MF. The upland MM9 $1^{st}$ transfer harbored population of phylum Proteobacteria (98.12%), Bacteriodetes (0.69%), Firmicutes (0.51%), Actinobacteria (0.08%), unidentified (0.54%), Cyanobacteria (0.01%), FBP (0.001%), OD1 (0.001%), Acidobacteria (0.005%). The family Enterobacteriaceae of Proteobacteria was the dominant member (86.76%) of the total population of which genus Enterobacter composed 86.76% making it a potential candidate to suppress bacterial wilt. The results suggest that this mixed culture approach is feasible to harvest microorganisms which may function as biocontrol agents.

• 한국응용곤충학회지
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• 제49권3호
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• pp.251-259
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• 2010

톱다리개미허리노린재(Riptortus clavatus)의 장내세균이 분리되었다. 형태학적 분석과 생화학적 분석을 통하여 세균이 Staphylococcus succinus와 가장 유사한 것으로 동정되었다. 16S rRNA 유전자의 염기서열은 이러한 동정 결과를 뒷받침했다. 페니실린G를 톱다리개미허리노린재 성충에게 경구투여 하였을 때 장내세균 밀도 감소와 치사 효과를 유발하였다. 동일한 방법으로 곤충병원세균(Xenorhabdus nematophila)의 세 가지 대사물질(benzylideneacetone, proline-tyrosine, and acetylated phenylalanine-glycine-valine)을 처리하였을 때, 톱다리개미허리노린재 장내세균의 밀도감소와 치사효과를 확인하였다. 이러한 결과는 톱다리개미허리노린재의 장내세균이 Staphylococcus sp.이며, 곤충병원세균 대사물질의 항균 활성이 장내세균과 궁극적으로 톱다리개미허리노린재의 생존에 영향을 미친다는 것을 제시하였다.

• Annals of Laboratory Medicine
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• 제38권6호
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• pp.545-554
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• 2018

Background: The increasing morbidity and mortality rates associated with Acinetobacter baumannii are due to the emergence of drug resistance and the limited treatment options. We compared characteristics of colistin-resistant Acinetobacter baumannii (CR-AB) clinical isolates recovered from patients with and without prior colistin treatment. We assessed whether prior colistin treatment affects the resistance mechanism of CR-AB isolates, mortality rates, and clinical characteristics. Additionally, a proper method for identifying CR-AB was determined. Methods: We collected 36 non-duplicate CR-AB clinical isolates resistant to colistin. Antimicrobial susceptibility testing, Sanger sequencing analysis, molecular typing, lipid A structure analysis, and in vitro synergy testing were performed. Eleven colistin-susceptible AB isolates were used as controls. Results: Despite no differences in clinical characteristics between patients with and without prior colistin treatment, resistance-causing genetic mutations were more frequent in isolates from colistin-treated patients. Distinct mutations were overlooked via the Sanger sequencing method, perhaps because of a masking effect by the colistin-susceptible AB subpopulation of CR-AB isolates lacking genetic mutations. However, modified lipid A analysis revealed colistin resistance peaks, despite the population heterogeneity, and peak levels were significantly different between the groups. Conclusions: Although prior colistin use did not induce clinical or susceptibility differences, we demonstrated that identification of CR-AB by sequencing is insufficient. We propose that population heterogeneity has a masking effect, especially in colistin non-treated patients; therefore, accurate testing methods reflecting physiological alterations of the bacteria, such as phosphoethanolamine-modified lipid A identification by matrix-assisted laser desorption ionization-time of flight, should be employed.

• Journal of Microbiology and Biotechnology
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• 제28권6호
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• pp.976-986
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• 2018

Knowledge about the gut bacterial communities associated with insects is essential to understand their roles in the physiology of the host. In the present study, the gut bacterial communities of a laboratory-reared insecticide-susceptible (IS), and a field-collected insecticide-resistant (IR) population of a major rice pest, the brown planthopper Nilaparvata lugens, were evaluated. The deep-sequencing analysis of the V3 hypervariable region of the 16S rRNA gene was performed using Illumina and the sequence data were processed using QIIME. The toxicological bioassays showed that compared with the IS population, IR population exhibited 7.9-, 6.7-, 14.8-, and 18.7-fold resistance to acephate, imidacloprid, thiamethoxam, and buprofezin, respectively. The analysis of the alpha diversity indicated a higher bacterial diversity and richness associated with the IR population. The dominant phylum in the IS population was Proteobacteria (99.86%), whereas the IR population consisted of Firmicutes (46.06%), followed by Bacteroidetes (30.8%) and Proteobacteria (15.49%). Morganella, Weissella, and Enterococcus were among the genera shared between the two populations and might form the core bacteria associated with N. lugens. The taxonomic-to-phenotypic mapping revealed the presence of ammonia oxidizers, nitrogen fixers, sulfur oxidizers and reducers, xylan degraders, and aromatic hydrocarbon degraders in the metagenome of N. lugens. Interestingly, the IR population was found to be enriched with bacteria involved in detoxification functions. The results obtained in this study provide a basis for future studies elucidating the roles of the gut bacteria in the insecticide resistance-associated symbiotic relationship and on the design of novel strategies for the management of N. lugens.