• 제목/요약/키워드: Bacterial culture

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Siberian Tiger (Panthera tigris altica)01서 Actinomycotic Mycetoma에 의한 복막염의 발생 증례보고 (Actinomycotic mycetoma in the peritoneal cavity of a Siberian tiger (fgH1Arrg rigrir gfric6))

  • 정수연;윤병일;김대용;권수완;이기환;황범태
    • 한국임상수의학회지
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    • 제15권1호
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    • pp.171-173
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    • 1998
  • A case of peritonitis caused by Actinomycotic spp is reported in a 12-year-old male Siberian tiger. Grossly, the mesentery was markedly thickened and contained numerous 1 to 3 mm diameter, white to yellowish foci. Fibrous adhesion showing tumorous thickening was also noted between the mesentery and abdominal organs. Histologicallyi the thickened mesentery and masses consisted of necrotic center with bacterial colonies surrounded by eosinophilic club (Splendore-hoeppli), neutrophils, macrophages, a few Iymphocytes and fibrosis. The bacterial colonies stained positvely with Gram's stain but were negative on acid-fast and periodic acid-Schifr method. Howeverr since the bacterial culture was not availablei the definitive causative agent was not able to specified.

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난배양성 토양세균을 위한 신배양기술의 고찰과 향후 발전 방향 (Review and Future Development of New Culture Methods for Unculturable Soil Bacteria)

  • 김재수
    • 미생물학회지
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    • 제47권3호
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    • pp.179-187
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    • 2011
  • 고찰을 통해 난배양성 토양세균의 특징과 배양에 성공한 사례 및 성공하기 위해 알아야 될 지식들이 무엇인지에 대해 기술하였다. 먼저 배지는 목적한 세균이 토양에서 느리게 성장하다가 실험실의 빠른 성장조건으로 전환하도록 알맞게 선택되어야 하는데 일반적으로 기질, 질소 및 인 등의 농도를 낮게 조절해야 한다. 새로운 배지를 만들기 위해서는 분자생태학적 연구도 병행되어야 한다. 세균 세포 간 음성적 상호작용을 줄이기 위해 평판배양 시 접종량도 평판 당 세포수가 50개 이하로 조절해야 한다. pH나 염농도 같은 성장조건은 실제 환경조건과 맞춰야 하며 배양온도는 낮거나 다양하게 그리고 배양기간은 길게 잡아야 한다. 새로운 배지에서 분리될 수많은 토양 미생물 콜로니들 중에서 단지 몇 개만이 난배양성이므로 이들이 기존에 배양이 되지 않았던 미생물인지를 신속 정확히 검출하는 방법이 필요하다. 또한 많은 토양세균들이 군집 내에서 서로 협력하며 살아가기 때문에 공동배양이나 상등액을 이용해서 토양 미생물을 농화증식하고 이를 순수 분리하면 배양에 성공할 수 있을 것이다.

Identification of Lactic Acid Bacteria in Galchi- and Myeolchi-Jeotgal by 16S rRNA Gene Sequencing, MALDI-TOF Mass Spectrometry, and PCR-DGGE

  • Lee, Yoonju;Cho, Youngjae;Kim, Eiseul;Kim, Hyun-Joong;Kim, Hae-Yeong
    • Journal of Microbiology and Biotechnology
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    • 제28권7호
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    • pp.1112-1121
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    • 2018
  • Jeotgal is a Korean traditional fermented seafood with a high concentration of salt. In this study, we isolated lactic acid bacteria (LAB) from galchi (Trichiurus lepturus, hairtail) and myeolchi (Engraulis japonicas, anchovy) jeotgal on MRS agar and MRS agar containing 5% NaCl (MRS agar+5% NaCl), and identified them by using 16S rRNA gene sequencing and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) as culture-dependent methods. We also performed polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) as a culture-independent method to identify bacterial communities. Five samples of galchi-jeotgal and seven samples of myeolchi-jeotgal were collected from different regions in Korea. A total of 327 and 395 colonies were isolated from the galchi- and myeolchi-jeotgal samples, respectively. 16S rRNA gene sequencing and MALDI-TOF MS revealed that the genus Pediococcus was predominant on MRS agar, and Tetragenococcus halophilus on MRS agar+5% NaCl. PCR-DGGE revealed that T. halophilus, Tetragenococcus muriaticus, and Lactobacillus sakei were predominant in both types of jeotgal. T. halophilus was detected in all samples. Even though the same species were identified by both culture-dependent and -independent methods, many species identified by the culture-dependent methods were not in the bacterial list identified by the culture-independent methods. The distribution of bacteria in galchi-jeotgal was more diverse than in myeolchi-jeotgal. The diverse LAB in galchi- and myeolchi-jeotgals can be further studied as candidates for starter cultures to produce fermented foods.

Dynamics of Mixed-Cultures of Gluconobacter suboxydans and Saccharomyces uvarum

  • Paik, Hyun-Dong;Oh, Doo-Whan
    • Preventive Nutrition and Food Science
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    • 제2권1호
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    • pp.66-70
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    • 1997
  • A mixed-culture of Gluconobacter suboxydans IFO 3172 and Saccharomyces uvarum IFO 0751 was per-formed in a synthetic medium. the optimal inculum ratio of G. suboydans and S. uvarum for mixed-culture fermentation was 150:1. The optimum pH, incubation temperature and aeration rate for mixed-culture fer- mentation were 5.0, 3$0^{\circ}C$ and 2.25vvm, reapectively. As a result of batch pure-and mixed-culture fer-mentation, specific growth rate in pure-culture of both strain was lower than that in mixed-culture. The yield of cell mass from S. uvarum exclusively decreased. The growth rate of the mixed-culture was very similar to the pure-culture in the begining of culture, but it has been decreased after 16hrs. In the mean time, S. uvarum in mixed-culture fermentation could grow due to fructose converted, but it could not row in pure-culture fermentation. Thus, the relationship was a sort of commensalism. The kinetic parameters cal-culated through steady-state results during continuous fermentations are as follows :{TEX}$$\mu$_{max1}${/TEX}=0.118({TEX}$h^{-1}${/TEX}), {TEX}$Ks_{1}${/TEX}=0.330(g/L),:{TEX}$$\mu$_{max2}${/TEX}=0.162({TEX}$h^{-1}${/TEX}), {TEX}$Ks_{2}${/TEX}=0.038(g/L). The yield of bacterial cell mass relatively constant, but yield of yest cell mass was gradually decreased.

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코퍼 하이드록사이드를 이용한 토마토 풋마름병 방제 (Control of Bacterial Wilt of Tomato using Copper Hydroxide)

  • 한유경;한경숙;이성찬;김수
    • 농약과학회지
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    • 제15권3호
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    • pp.298-302
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    • 2011
  • 국내에서 Ralstonia solanacearum에 의한 풋마름병은 토마토 재배에 심각한 피해를 주고 있다. R. solanacearum에 의한 풋마름병을 방제하기 위한 약제를 선발하기 위하여 5종 항생제를 이용하여 균에 대한 생장 억제 효과와 포장에서의 토마토 풋마름병 방제효과를 조사하였다 R. solanacearum에 대한 생장억제효과를 조사한 결과, streptomycin 수화제, oxytetracyclin streptomycin sulfate 수화제, oxolinic acid 수화제는 병원균에 대한 생육억제 효과가 우수하였다. 포장에서 토마토 풋마름병에 대한 방제효과 시험을 실시한 결과, copper hydroxide 수화제가 62.5%의 가장 높은 방제효과를 나타내었다. Copper hydroxide 수화제는 친환경유기농자재에 등록된 약제로서 관행 재배뿐만 아니라 토마토 친환경 재배시에도 풋마름병 방제에 사용할 수 있을 것이다.

A novel retentive type of dental implant prosthesis: marginal fitness of the cementless double crown type implant prosthesis evaluated by bacterial penetration and viability

  • Hong, Seoung-Jin;Kwon, Kung-Rock;Jang, Eun-Young;Moon, Ji-Hoi
    • The Journal of Advanced Prosthodontics
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    • 제12권4호
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    • pp.233-238
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    • 2020
  • PURPOSE. This study aims to compare the marginal fitness of two types of implant-supported fixed dental prosthesis, i.e., cementless fixation (CL.F) system and cement-retained type. MATERIALS AND METHODS. In each group, ten specimens were assessed. Each specimen comprised implant lab analog, titanium abutment fabricated with a 2-degree tapered axial wall, and zirconia crown. The crown of the CL.F system was retained by frictional force between abutment and relined composite resin. In the cement-retained type, zinc oxide eugenol cement was used to set crown and abutment. All specimens were sterilized with ethylene oxide, immersed in Prevotella intermedia culture in a 50 mL tube, and incubated with rotation. After 48 h, the specimens were washed thoroughly before separating the crown and abutment. The bacteria that penetrated into the crown-abutment interface were collected by washing with 500 µL of sterile saline. The bacterial cell number was quantified using the agar plate count technique. The BacTiter-Glo Microbial Cell Viability Assay Kit was used to measure bacterial adenosine triphosphate (ATP)-bioluminescence, which reflects the bacterial viability. The t-test was performed, and the significance level was set at 5%. RESULTS. The number of penetrating bacterial cells assessed by colony-forming units was approximately 33% lower in the CL.F system than in the cement-retained type (P<.05). ATP-bioluminescence was approximately 41% lower in the CL.F system than in the cement-retained type (P<.05). CONCLUSION. The CL.F system is more resistant to bacterial penetration into the abutment-crown interface than the cement-retained type, thereby indicating a precise marginal fit.

Molecular Profiling of Rhizosphere Bacterial Communities Associated with Prosopis juliflora and Parthenium hysterophorus

  • Jothibasu, K.;Chinnadurai, C.;Sundaram, S.P.;Kumar, K.;Balachandar, D.
    • Journal of Microbiology and Biotechnology
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    • 제22권3호
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    • pp.301-310
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    • 2012
  • Prosopis juliflora and Parthenium hysterophorus are the two arid, exotic weeds of India that are characterized by distinct, profuse growth even in nutritionally poor soils and environmentally stressed conditions. Owing to the exceptional growth nature of these two plants, they are believed to harbor some novel bacterial communities with wide adaptability in their rhizosphere. Hence, in the present study, the bacterial communities associated with the rhizosphere of Prosopis and Parthenium were characterized by clonal 16S rRNA gene sequence analysis. The culturable microbial counts in the rhizosphere of these two plants were higher than bulk soils, possibly influenced by the root exudates of these two plants. The phylogenetic analysis of V1_V2 domains of the 16S rRNA gene indicated a wider range of bacterial communities present in the rhizosphere of these two plants than in bulk soils and the predominant genera included Acidobacteria, Gammaproteobacteria, and Bacteriodetes in the rhizosphere of Prosopis, and Acidobacteria, Betaproteobacteria, and Nitrospirae in the Parthenium rhizosphere. The diversity of bacterial communities was more pronounced in the Parthenium rhizosphere than in the Prosopis rhizosphere. This culture-independent bacterial analysis offered extensive possibilities of unraveling novel microbes in the rhizospheres of Prosopis and Parthenium with genes for diverse functions, which could be exploited for nutrient transformation and stress tolerance in cultivated crops.

Evaluation of the Selective Enrichment Culture to Recover Clostridium difficile

  • An, Byoungrak;Kim, Heejung;Lee, Kyungwon
    • 대한임상검사과학회지
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    • 제46권4호
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    • pp.140-142
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    • 2014
  • To evaluate the recovery rates to increase toxigenic C. difficile, the selective enrichment broth culture methods were compared with commonly used cytotoxin assays and toxigenic culture. First, the enrichment culture, using the selective medium broth for 2 to 5 days, was performed and then, toxigenic C. difficile was confirmed by C. difficile toxin gene-specific PCR after being cultured on C. difficile selective agar. The sensitivity of C. difficile from the enrichment culture (100%) was higher than that of C. difficile selective agar culture (93.8%), while positive predictive values (PPV) were low; 72.7% (16/22) and 88.2% (15/17). PPV of the enrichment culture are not high. Recently, combinations of C. difficile selective agar culture, C. difficile A & B assays, glutamate dehydrogenase, and nucleic acid amplification method are widely used. The enrichment culture was disadvantageous in PPV, turn-around time, and cost. So, what we performed is not considered as a common method of diagnosis of C. difficile-associated diarrhea.

EFFECT OF PATULIN ON THE GROWTH OF BACTERIOPHAGE M13

  • Lee, Kil-Soo
    • Toxicological Research
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    • 제5권1호
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    • pp.53-59
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    • 1989
  • A mycotoxin Patulin, isolated from apple juice medium cultured with Penicillium patulum NRRL5259, was purified through acid aluminum column using ethyl ether as eluent. The yield of purified patulin crystal was 3mg/ml culture medium after 8 days of shaking culture at 28C. The growth rate of Escherichia coli K12JM103 infected with bacteriophage M13 was decreased by patulin at the concentration range of 1Mug/ml to 10Mu/nl. ED50 of patulin for the bacterial growth was 4.5Mug/ml and 10Mug/ml of patulin caused maximum inhibitory effect (60% inhibition) on the growth.

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Determination of Carbon Source Utilization of Bacillus and Pythium Species by Biolog$^{(R)}$ Microplate Assay

  • Chun, Se-Chul;R.W. Schneider;Chung, Ill-Min
    • Journal of Microbiology
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    • 제41권3호
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    • pp.252-258
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    • 2003
  • The carbon utilizations of Bacillus species and Pythium species were investigated by using a Biolog$^{(R)}$ microplate assay to determine if there are differences in the carbon utilizations of selected strains of these species. It may be possible to afford a competitive advantage to bacterial biological control agents by providing them with a substrate that they can readily use as a carbon source, for example, in a seed coating formulation. Microplates, identified as SFP, SFN and YT were used to identify spore-forming bacteria, nonspore-forming bacteria, and yeast, respectively. Bacterial and mycelial suspensions were adjusted to turbidities of 0.10 to 0.11 at 600 nm. One hundred microliters of each of the bacterial and mycelial suspension were inoculated into each well of each of the three types of microplates. L-arabinose, D-galactose, D-melezitose and D-melibiose of the 147 carbohydrates tested were found to be utilized only by bacteria, and not by Pythium species, by Biolog$^{(R)}$ microplate assay, and this was confirmed by traditional shake flask culture. Thus, it indicated that the Biolog$^{(R)}$ microplate assay could be readily used to search for specific carbon sources that could be utilized to increase the abilities of bacterial biological control agents to adapt to contrived environments.