• Molecules and Cells
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• v.44 no.3
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• pp.179-185
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• 2021

Vancomycin response regulator (VncR) is a pneumococcal response regulator of the VncRS two-component signal transduction system (TCS) of Streptococcus pneumoniae. VncRS regulates bacterial autolysis and vancomycin resistance. VncR contains two different functional domains, the N-terminal receiver domain and C-terminal effector domain. Here, we investigated VncR C-terminal DNA binding domain (VncRc) structure using a crystallization approach. Crystallization was performed using the micro-batch method. The crystals diffracted to a 1.964 Å resolution and belonged to space group P212121. The crystal unit-cell parameters were a = 25.71 Å, b = 52.97 Å, and c = 60.61 Å. The structure of VncRc had a helix-turn-helix motif highly similar to the response regulator PhoB of Escherichia coli. In isothermal titration calorimetry and size exclusion chromatography results, VncR formed a complex with VncS, a sensor histidine kinase of pneumococcal TCS. Determination of VncR structure will provide insight into the mechanism by how VncR binds to target genes.

• The Journal of Korean Institute of Communications and Information Sciences
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• v.15 no.10
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• pp.829-841
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• 1990

On assuming that the transmission speed of the original information is the fifth-order transmission speed of the Korea digital multiplex hierarchy (564.992Mb/s), this paper proposes a new structure of the transmission line frame at the terminal repeater system, in order to not only maintain and conserve 565Mb/s optical fiber transmission system but also make the B.S.I. of digital communication network for the optical transmission. And the structure uses the mBIZ transmission line code, which is considered the optimal transmission line code of conventional transmission line codes. System hardware of the transmission line frame structure proposed in this paper is consisted by a method of pulse stuffing after converting the speed of the original information signal sequence at the terminal repeater system for 565Mb/s optical transmission. As a result of this, we can prevent the optical transmission system from a domino phenomenon, the phenomenon of the continuous error multiplication of systems by the transmission error, and suppress timing jitter and the identical consecutive digit number. And also we can improve SNR of the optical transmission system about 2dB because of raising total BER at the optical terminal system up to 10.

• Journal of Industrial Technology
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• v.21 no.B
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• pp.257-263
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• 2001

Terminal paging is the process of determining the exact location of a particular mobile terminal. The paging cost is related to the number of paging cycles and the number of cells being polled by each cycle. In this paper, we first analyze the performance of various terminal paging strategies in terms of the number of polling cycles and the number of polling signals. Then we present a paging scheme which combines Shortest-Distance-First with movement history list. Simulation results show that the proposed paging scheme reduces the number of polling signals as well as the number of polling cycles.

• The Journal of the Korea institute of electronic communication sciences
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• v.2 no.4
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• pp.236-243
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• 2007

Radio frequencies used by the logistics of RFID in various areas, including research the core of ubiquitous computing. Moreover, RFID and the convergence of mobile terminals RFID research started as a B2B service area, B2C services and the expansion of the zone. B2B2C to in order to provide services ranging from mobile terminals for RFID technology development is needed. We develop middleware for a mobile RFID terminal. It consists of multi-code recognition module, the reader control module, the module code interpretation, and Dispatcher module. We present the implementation of these functions on an emulator.

• Molecules and Cells
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• v.43 no.12
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• pp.1023-1034
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• 2020

Complement fragment iC3b serves as a major opsonin for facilitating phagocytosis via its interaction with complement receptors CR3 and CR4, also known by their leukocyte integrin family names, αMβ2 and αXβ2, respectively. Although there is general agreement that iC3b binds to the αM and αX I-domains of the respective β2-integrins, much less is known regarding the regions of iC3b contributing to the αX I-domain binding. In this study, using recombinant αX I-domain, as well as recombinant fragments of iC3b as candidate binding partners, we have identified two distinct binding moieties of iC3b for the αX I-domain. They are the C3 convertase-generated N-terminal segment of the C3b α'-chain (α'NT) and the factor I cleavage-generated N-terminal segment in the CUBf region of α-chain. Additionally, we have found that the CUBf segment is a novel binding moiety of iC3b for the αM I-domain. The CUBf segment shows about a 2-fold higher binding activity than the α'NT for αX I-domain. We also have shown the involvement of crucial acidic residues on the iC3b side of the interface and basic residues on the I-domain side.

• Journal of Microbiology and Biotechnology
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• v.19 no.10
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• pp.1176-1183
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• 2009

Lactobacillus crispatus (L. crispatus) ZJ001 is highly adhesive to epithelial cells and expresses S-layer proteins. In this study, S-S-layer layer genes were sequenced and expressed in E. coli to characterize the function of proteins with this particular strain. L. crispatus ZJ001 harbored two S-layer genes slpA and slpB, and only slpA gene was expressed in the bacterium, as revealed by RT-PCR and immunoassays. The mature SlpA showed 47% amino acid sequence identity to SlpB. The SlpA and SlpB of L. crispatus ZJ001 were highly homologous at the C-terminal region to other Lactobacillus S-layer proteins, but were substantially variable at N-terminal and middle regions. Electron microscopic analysis indicated that His-slpA expressed in E. coli was able to form a sheet-like structure similar to the natural S-layer, but His-slpB formed as disc-like structures. In the cell binding experiments, HeLa cells were able to bind to both recombinant His-slpA and His-slpB proteins to the extent similar to the natural S-layer. The cell binding domains remain mostly in the N-terminal regions in SlpA and SlpB, as shown by high binding of truncated peptides SlpA2-228 and SlpB2-249. Our results indicated that SlpA was active and high binding to HeLa cells, and that the slpA gene could be targeted to display foreign proteins on the bacterial surface of ZJ001 as a potential mucosal vaccine vector.

• Journal of Applied Biological Chemistry
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• v.53 no.2
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• pp.112-115
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• 2010

To analyze the surface properties of bacteriophytochrome (BphP), five (2B8, 2C11, 3B2, 3D2, 3H7) anti-BphP monoclonal antibodies were produced by using full-length of BphP of Deinococcus radiodurnas. 2B8 and 2C11 preferentially recognized the epitopes at N-terminal region of BphP, whereas 3B2, 3D2 and 3H7 showed preferential affinities to the epitopes of C-terminal region of BphP.

• Journal of Microbiology and Biotechnology
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• v.16 no.9
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• pp.1416-1421
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• 2006

We identified a gene encoding the N-acetylmuramoyl L-alanine amidase (amiB) of Vibrio anguillarum, which catalyzes the degradation of peptidoglycan in bacteria. The entire open reading frame (ORF) of the amiB gene was composed of 1,722 nucleotides and 573 amino acids. The deduced amino acid sequence of AmiB showed a modular structure with two main domains; an N-terminal region exhibiting an Ami domain and three highly conserved, continuously repeating LysM domains in the C-terminal portion. An amiB mutant was constructed by homologous recombination to study the biochemical function of the AmiB protein in V. anguillarum. Transmission electron microscopy (TEM) revealed morphological differences, and that the mutant strain formed trimeric and tetrameric unseparated cells, suggesting that this enzyme is involved in the separation of daughter cells after cell division. Furthermore, inactivation of the amiB gene resulted in a marked increase of sensitivity to oxidative stress and organic acids.

• The KIPS Transactions:PartB
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• v.13B no.2 s.105
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• pp.179-186
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• 2006

A user interface that connects a user to intelligent robots needs to be designed for executing them efficiently. In this paper, it is analyzed how to organize a mobile terminal based user interface according to the function and level of autonomy of intelligent robots and the user interface of PDA (Personal Digital Assistant) and smart phone is developed for controlling intelligent robots remotely. In the image-based user interface, a user can see the motion of a robot directly and control the robot. In the map-based interface, the quantity of transmission information is reduced and therefore a user can control the robot with a small delay of transmission time.

• Animal cells and systems
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• v.5 no.2
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• pp.133-137
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• 2001

Long terminal repeats (LTRs) of the human endogenous retrovirus K family (HERV-K) have been found to be coexpressed with sequences of genes closely located nearby. We examined transcribed HERV-K LTR elements in human brain tissue. Using cDNA synthesized from mRNA of the human brain, we performed PCR amplification and identified ten HERV-K LTR elements. These LTR elements showed a high degree of sequence similarity (92.4-99.7%) with the human-specific LTR elements. A phylogenetic tree obtained by the neighbor-joining method revealed that HERV-K LTR elements could be divided into two groups through evolutionary divergence. Some HERV-K LTR elements (HKL-B7, HKL-B8, HKL-B10) belonging to the group II from human brain cDNA were closely related to the human-specific HERV-K LTR elements. Our data suggest that HERV-K LTR element are active in the human brain; they could conceivably play a pathogenic role in human diseases such as psychosis.