• Title/Summary/Keyword: 3D Data Structure

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Design of a SIMT architecture GP-GPU Using Tile based on Graphic Pipeline Structure (타일 기반 그래픽 파이프라인 구조를 사용한 SIMT 구조 GP-GPU 설계)

  • Kim, Do-Hyun;Kim, Chi-Yong
    • Journal of IKEEE
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    • v.20 no.1
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    • pp.75-81
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    • 2016
  • This paper proposes a design of the tile based on graphic pipeline to improve the graphic application performance in SIMT based GP-GPU. The proposed Tile based on graphics pipeline avoids unnecessary graphic processing operation, and processes the rasterization step in parallel. The massive data processing in parallel through SIMT architecture improve the computational performance, thereby improving the 3D graphic pipeline performance. The more vertex data of 3D model, the higher performance. The proposed structure was confirmed to improve processing performance of up to 3 times from about 1.18 times as compared to 'RAMP' and previous studies.

Rend 3D R-tree: An Improved Index Structure in Moving Object Database Based on 3D R-tree (Rend 3D R-tree : 3D R-tree 기반의 이동 객체 데이터베이스 색인구조 연구)

  • Ren XiangChao;Kee-Wook Rim;Nam Ji Yeun;Lee KyungOh
    • Proceedings of the Korea Information Processing Society Conference
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    • 2008.11a
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    • pp.878-881
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    • 2008
  • To index the object's trajectory is an important aspect in moving object database management. This paper implements an optimizing index structure named Rend 3D R-tree based on 3D R-Tree. This paper demonstrates the time period update method to reconstruct the MBR for the moving objects in order to decrease the dead space that is produced in the closed time dimension of the 3D R-tree, then a rend method is introduced for indexing both current data and history data. The result of experiments illustrates that given methods outperforms 3D R-Tree and LUR tree in query processes.

Correction of the Sea Effect in the Magnetotelluric (MT) Data Using an Iterative Tensor Stripping During Inversion (MT 자료 역산과정에서 반복적인 Tensor Stripping을 통한 해양효과 보정)

  • Yang, Jun-Mo;Lee, Chun-Ki;Yoo, Hai-Soo
    • Geophysics and Geophysical Exploration
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    • v.11 no.4
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    • pp.286-301
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    • 2008
  • When magnetotelluric (MT) data are obtained in vicinity of the coast, the sea can distort observed MT responses, especially those of deep part of subsurface. We introduce an iterative method to correct the sea effect, based on the previous topographic correction method which removes the distortions due to topographic changes in seafloor MT data. The method first corrects the sea effect in observed MT impedance, and then inverts corrected responses in a model space without the sea. Due to mutual coupling between sea and subsurface structure, the correction and inversion steps are iterated until changes in each result become negligible. The method is validated for 1-D and 2-D structure using synthetic MT data produced by 3-D forward modeling including surrounding seas. In all cases, the method closely recovers the given structure after a few iterations. To test the applicability of the proposed method to field data, we generate synthetic MT data for the Jeju Island whose 1-D conductivity structure is well known, using 3-D forward modeling. The distortions due to the surrounding sea start to appear below the frequency about 1 Hz, and are relatively severe in the electrical field perpendicular to the coastline because of the location of the observation sites. The proposed method successfully eliminates the sea effect after three iterations, and both 1-D and 2-D inversion of corrected responses closely recover the given subsurface structure of the Jeju Island model.

JProtein : A Protein Structure Viewer based on Java3D Technology (JProtein : Java3D 기법을 이용한 단백질 구조 뷰어)

  • Moon Nam-Doo;Byun Sang-Hee;Kim Jin-Hong;Han In-Seob;Lee Myung-Joon
    • The KIPS Transactions:PartD
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    • v.11D no.7 s.96
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    • pp.1517-1526
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    • 2004
  • Entering the post genome era with an increasing amount of protein data available in public databases, the study of tertiary structure of pro-teins has been artively in progress. To analyze the structure of a protein effectively, it is necessary to visualize the tertiary structure of a protein. Rececntly, many visualization tools based on Java technology have been developed to visualize a protein whose structure has been known. In this paper, we describe a new protein visualization system, named JProtein. It is designed to be an easy-to-use, platform neutral melocular visualization tool. The JProtein system is developed using Java3D technology. Java3D is an API providing a programming interface for 3D representations. The system informs us the angle and the distance of the interacting atoms in amino acids which are visualized, providing several 3D representation models of a protein molecule. In particular, the JProtein system presents synchronous stereo view as well as asynchronous one.

Exploring Interaction in Generalized Linear Models

  • Kahng, Myung-Wook
    • Journal of the Korean Data and Information Science Society
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    • v.16 no.1
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    • pp.13-18
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    • 2005
  • We explore the structure and usefulness of the 3-D residual plot as a basic tool for dealing with interaction in generalized linear models. If predictors have an interaction effect, the shape obtained by rotating the 3-D residual plot will show its presence. To illustrate the use of this plot as an aid to exploring the interaction, we present an example of a binomial regression model using simulated data.

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Classification and Regression Tree Analysis for Molecular Descriptor Selection and Binding Affinities Prediction of Imidazobenzodiazepines in Quantitative Structure-Activity Relationship Studies

  • Atabati, Morteza;Zarei, Kobra;Abdinasab, Esmaeil
    • Bulletin of the Korean Chemical Society
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    • v.30 no.11
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    • pp.2717-2722
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    • 2009
  • The use of the classification and regression tree (CART) methodology was studied in a quantitative structure-activity relationship (QSAR) context on a data set consisting of the binding affinities of 39 imidazobenzodiazepines for the α1 benzodiazepine receptor. The 3-D structures of these compounds were optimized using HyperChem software with semiempirical AM1 optimization method. After optimization a set of 1481 zero-to three-dimentional descriptors was calculated for each molecule in the data set. The response (dependent variable) in the tree model consisted of the binding affinities of drugs. Three descriptors (two topological and one 3D-Morse descriptors) were applied in the final tree structure to describe the binding affinities. The mean relative error percent for the data set is 3.20%, compared with a previous model with mean relative error percent of 6.63%. To evaluate the predictive power of CART cross validation method was also performed.

Development of smart CAD/CAM system for machining center based on B-Rep solid modeling techniques(l) (A study on the B-Rep solid modeler using half edge data structure) (B-Rep 솔리드모델을 이용한 머시닝센터용 CAD/CAM시스템 개발(I))

  • Yang, Hee-Goo;Kim, Seok-Il
    • Journal of the Korean Society for Precision Engineering
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    • v.13 no.3
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    • pp.150-157
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    • 1996
  • In this paper, to develop a smart CAD/CAM system for systematically performing from the 3-D solid shape design of products to the CNC cutting operation of products by a machining center, a B-Rep solid modeler is realized based on the half edge data structure. Because the B-Rep solid modeler has the various capabilities related to the solid definition functions such as the creation operation of primitives and the translational and rotational sweep operation, the solid manipulation functions such as the split operation and the Boolean set operation, and the solid inversion function for effectively using the data structure, the 3-D solid shape of products can be easily designed and constructed. Also, besides the automatic generation of CNC code, the B-Rep solid modeler can be used as a powerful tool for realizing the automatic generation of finite elements, the interfer- ence check between solids, the structural design of machine tools and robots and so on.

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Structural Design and Analysis for 3D Ultrasonic Anemometer

  • Kim, Kyung-Won;Choi, Jae-Yeong;Lee, Woo-Jin;Lee, Seon-Gil
    • Journal of Sensor Science and Technology
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    • v.25 no.2
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    • pp.86-90
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    • 2016
  • A 3D ultrasonic anemometer measures the direction and velocity of wind in a 3D space. The 2D ultrasonic anemometers developed by different manufacturers do not differ significantly in terms of their form or structure. The 3D ultrasonic anemometers, on the other hand, have more diverse forms than their 2D counterparts depending on the measurement algorithms and methods. Designing and reviewing the structure at the initial stage and defining its performance objectives are time-consuming processes. The process can be made cost-effective and time-saving if the validity is tested by model design and structural interpretation, and the structure is designed to withstand high wind velocities. This study presents the results of a 3D ultrasonic anemometer on real sample data by using a 3D modeling program, CATIA, for ultrasonic anemometer modeling.

Comparison and Analyzing System for Protein Tertiary Structure Database expands LOCK (LOCK을 확장한 3차원 단백질 구조비교 및 분석시스템의 설계 및 구현)

  • Jung Kwang Su;Han Yu;Park Sung Hee;Ryu Keun Ho
    • The KIPS Transactions:PartD
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    • v.12D no.2 s.98
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    • pp.247-258
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    • 2005
  • Protein structure is highly related to its function and comparing protein structure is very important to identify structural motif, family and their function. In this paper, we construct an integrated database system which has all the protein structure data and their literature. The structure queries from the web interface are compared with the target structures in database, and the results are shown to the user for future analysis. To constructs this system, we analyze the Flat-File of Protein Data Bank. Then we select the necessary structure data and store as a new formatted data. The literature data related to these structures are stored in a relational database to query the my kinds of data easily In our structure comparison system, the structure of matched pattern and RMSD valure are calculated, then they are showed to the user with their relational documentation data. This system provides the more quick comparison and nice analyzing environment.

A Study on the Design of D/A Converter based on Data Weighted Average Technique for enhancement of reliability (혼합형 전류 구동 D/A 컨버터 설계 제작에 있어서 데이터 가중평균기법을)

  • Kim, S.D.;Woo, Y.S.;Kim, D.G.;Sung, M.Y.
    • Proceedings of the KIEE Conference
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    • 1999.07g
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    • pp.3215-3217
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    • 1999
  • In this paper, a new structure of realizing switching control logic for Data Weighted Average Technique is suggested. It uses memory and adder for summing past binary input and this summed data is used to select one switch in control logic. This control logic acts in parallel regardless of resolution so increasing resolution don't affect on converting speed. In this reason, high speed and high resolution D/A converter based on Data Weighted Average Technique could be made. In this paper, 4 bits current mode thermometer code D/A converter is degined and simulated by using HSPICE. Simulated results show that new structure of D/A converter has more than 250MHz converting speed and less than 0.0003[LSB] INL error. It is very useful in low power circuit because of using 3.3 V supply voltage.

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