• Title/Summary/Keyword: 변이분석

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RAPD Pattern of Radiation Induced Variants of Oyster Mushroom(Pleurotus ostreatus) (느타리(Pleurotus ostreatus)에서 방사선유기 변이주의 RAPD 양상)

  • Lee, Young-Keun;Chang, Hwa-Hyoung;Kim, Won-Rok;Kim, Jin-Kyu;Kim, Jae-Sung
    • Korean Journal of Environmental Agriculture
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    • v.17 no.3
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    • pp.195-199
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    • 1998
  • To induce the cellulolytic variants of oyster mushroom (Pleurotus ostreatus), basidiospores were irradiated at the dose of $1kGy{\sim}20kGy$ of gamma-ray. After irradiation, activities of extracellular enzymes were determined by the method of MUF residue and genetic similarity was observed by RAPD analysis of variants. Three variants of 2KG-1, 2KG-2 and 20KG-1 were clarified as highly cellulolytic isolates. It seemed that the difference of genetic similarity among variants have derived from gamma-ray radiation. It is suggested that 3 cellulolytic variants induced by gamma-ray in this experiment could play a useful role to reuse cellulosic bioresources.

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Year-dependent variations of organic acid contents in pre-matured fruits of 175 Korean Prunus mume landraces. (국내 수집 매실유전자원의 청매실 함유 유기산 함량의 연차 변이)

  • Gwak, Bo-Kyeong;Eom, Soyeong;Wimonmuang, Kanphassorn;Kang, Hee-Kyoung;Lee, Young-Sang
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2018.10a
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    • pp.115-115
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    • 2018
  • 매실나무(Prunus mume)의 풋과일인 매실은 피로회복, 소화촉진, 살균 및 항균작용 등 다양한 생리활성을 갖고 있다. 본 연구는 국내 수집 매실 유전자원 172점의 핵심 기능성 물질인 유기산의 함량 특성을 평가하고자 2017년과 2018년 2년간 청매실을 수확하여 옥살산(OA), 사과산(MA), 구연산(CA)의 함량을 HPLC를 이용하여 분석하고 그 연차 변이를 평가하였다. 전체 유전자원 매실의 2년간 총유기산(TA) 함량은 평균 5.5% (최소 3.9%-최대 7.8%)이었으며, MA와 CA 및 OA의 평균 함량은 각각 2.7%, 2.8%, 0.1%였다. 대상 자원 내 유기산별 함량 변이는 CA (RSD=30%)가 MA (RSD=21%)보다 높게 나타났다. 2018년산 매실은 2017년산에 비교할 때 MA와 OA는 함량이 낮아 연차 변이가 인정되었으나 CA는 차이가 없었다. 비록 연차 변이는 있었으나 유전자원별 함량은 MA와 CA 및 TA에서 모두 2017년산과 2018년산간 정의 상관이 인정되어 유기산 함량이 높고 낮은 자원의 특성은 유지됨을 알 수 있었다. 대상 유전자원 중 TA함량이 가장 높았던 자원은 구산매, 용흥흥매, 상금백옥매 등이었으며, 함량이 낮은 자원은 한산매, 지곡매 등이었다. 상기 결과를 통해 매실 유기산 함량관련 국내 매실 유전자원의 유전적 다양성과 연차 변이의 영향을 평가할 수 있었다.

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A Study on the Impact of Applying Network Address Mutation Technology within the Network Protection System (네트워크 보호체계에서 네트워크 주소변이 기술 적용에 대한 영향성 연구)

  • Suwon Lee;Seyoung Hwang;SeukGue Hong
    • Journal of the Korea Institute of Information Security & Cryptology
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    • v.33 no.6
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    • pp.939-946
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    • 2023
  • In the hyper-connected network, which network equipment is diverse and network structure is complex, the attack surface has also increased. In this environment, MTD(Moving Target Defense) technology is being researched as a method to fundamentally defend against cyber attacks by actively changing the attack surface. network-based MTD technologies are being widely studied. However, in order for network address mutation technology to be applied within the existing fixed IP-based system, research is needed to determine what impact it will have. In this paper, we studied the impact of applying network address mutation technology to the existing network protection system. As a result of the study, factors to be considered when firewall, NAC, IPS, and network address mutation technologies are operated together were derived, and elements that must be managed in network address mutation technology for interoperability with the network analysis system were suggested.

Comparison of the Clinical and Laboratory Features of COVID-19 in Children During All Waves of the Epidemic: A Single Center Retrospective Study

  • Sunbok Suh;Hyungsu Kim
    • Pediatric Infection and Vaccine
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    • v.31 no.1
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    • pp.83-93
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    • 2024
  • Purpose: Since the start of the coronavirus disease 2019 (COVID-19) pandemic, various variants of concern have emerged. We divided the representative COVID-19 mutation period into four waves and aimed to analyze the clinical and laboratory features of children with COVID-19 from pre-mutation wave to the middle of omicron wave. Methods: We retrospectively reviewed the medical records of hospitalized patients aged ≤19 years with laboratory confirmed COVID-19. Clinical and laboratory findings during pre-mutation (February 1st 2020 to September 30th 2020), alpha/beta (October 1st 2020 to May 31st 2021), delta (June 1st 2021 to October 31st 2021), and omicron (November 1st 2021 to May 31st 2022) waves were compared. Results: Among total 827 patients, 163 (19.7%) were asymptomatic, and the frequency of fever and cough was 320 (38.7%) and 399 (48.2%), respectively. The proportion of fever ≥38.5℃ was observed to be high during the omicron wave in the age group under 12 years. Lymphopenia was observed highly in the omicron wave in the age group under 12 years, and in the delta wave in the age group older than 12 years. Neutropenia was highly observed in the delta wave in the 0-4 years age group. Conclusions: There were distinct characteristics during all epidemic waves of COVID-19. Children with COVID-19 had more frequent persistent fever during delta wave and children during the omicron wave had a higher peak fever.

Characterization and Evaluation of Melanocortin 4 Receptor (MC4R) Gene Effect on Pork Quality Traits in Pigs (돼지 Melanocortin 4 Receptor (MC4R) 유전자의 육질연관성 분석)

  • Roh, Jung-Gun;Kim, Sang-Wook;Choi, Jung-Suk;Choi, Yang-Il;Kim, Jong-Joo;Choi, Bong-Hwan;Kim, Tae-Hun;Kim, Kwan-Suk
    • Journal of Animal Science and Technology
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    • v.54 no.1
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    • pp.1-8
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    • 2012
  • This study aimed to investigate the single nucleotide polymorphisms (SNPs) of the porcine MC4R gene and validate the effect of the MC4R genotype for marker assisted selection (MAS). Six amplicons were produced to analyze the entire base sequences of the porcine MC4R gene and six SNPs were detected (c.-780C>G, c.-135C>T, c.175C>T-Leu59Leu, c.707A>G-Arg236His, c.892A>G-Asp298Asn, and c.*430A>T). Linkage disequilibrium (LD) of the six SNPs was analyzed by performing haploid analysis. There was a perfect linkage disequilibrium in c.-780C>G, c.-135C>T, c.175C>T-Leu59Leu, c.707A>G-Arg236His, and c.*430A>T. Only the c.892A>G (Asp298Asn) SNP showed a very low LD with an $r^2$ value of 0.028 and the D' value of 0.348. As a result, the two SNPs-c.707A>G (Arg236His) and c.892A>G (Asp298Asn)-were selected to extract the genotype frequencies from the 5 pig breeds by using the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) genotype analysis method. The SNP frequency of c.707A>G (Arg236His) indicated the presence of the A (His) allele only in Yorkshire, while the G allele was fixed in the KNP, Landrace, Berkshire, and Duroc. Association analysis was carried out in 484 pigs with the c.707A>G (Arg236His) SNP and the meat quality traits of four different pig cross populations: a significant association was noted in crude fat, sirloin moisture, meat color, and the degree of red and yellow coloration. The frequency of the c.892A>G(Asp298Asn) SNP genotype varied among the breeds; while Duroc showed the highest frequency of the A (Asn) allele, KNP showed the highest frequency of the G (Asp) allele. Association analysis was carried out in 1126 pigs with the c.892A>G (Asp298Asn) SNP and the meat quality traits of four pig populations: a highly significant linkage was noted in the back-fat thickness (P<0.002). It was found that the back-fat thickness was higher in individuals with the AA genotype than in those with the AG or GG genotype. Thus, in this study, we verified that the c.892A>G (Asp298Asn) SNP in the pig MC4R gene has a sufficient effect as a gene marker for MAS in Korean pork industry.

Variation of Soil Characteristics in Lava Plain (용암류대지(熔岩類臺地)에 분포(分布)한 토양(土壤) 특성(特性)의 변이분석(變異分析))

  • Park, Chang-Seo;Um, Ki-Tae;Min, Kyeong-Beom
    • Korean Journal of Soil Science and Fertilizer
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    • v.17 no.4
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    • pp.343-348
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    • 1984
  • Variation of soil properties within mapping unit of lava plain soils was statistically summarized. Properties such as particle size distribution, moisture retention, color, pH, and CEC are relatively unaffected by soil management while Na, K, base saturation, and available $P_2O_5$ most affected by management. These soils were correctly classified with regard to order at 66.5, to greatgroup at 56.0, and to series at 43.8%. CV values greater than 90% could be symptomatic of skew distribution. Distributions of sand content and some chemical properties were log-normal.

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Biosynthesis of New Oligosaccharides via Acceptor Reaction using Fructosyloligosaccharide as an Acceptor (Fructosyloligosaccharide를 Acceptor 반응의 기질로 사용한 새로운 올리고당의 생합성)

  • 이찬용;이충환
    • Korean Journal of Microbiology
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    • v.35 no.2
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    • pp.146-152
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    • 1999
  • Acceplor reaction of glucosyltr~ansferase of Streptococcus ,SO~~-~IZLIS with f ~ ~ t o ~ y l o l i g o ~ a ~ ~ h a r i d e ~ was studied for the biosynthesis of novel olgisaccharides. First, bacilracin resistant mutants were selected by mutagenesis of Streptococcus sobrimis ATCC27351. Among these mutants 4 strains were selected by resistance to bacitracin and increase of glucosyltransferase. Acceptor reaction of maltose was analyzed by TLC and image analysis. There were differences in the specificity of the acceptor reaclion by Ule glucosylumsferase between mother strain (Streptococcus sobrinus ATCC2735) and bacitracin resistant mutants (Streptococcus sobrinus BR24C, Strepfococcus sobrinus CH-5). Molher strain did ilot show an acceptor reaction with fructosyloligosaccharides such as 1-keqtose and nystose. Acceptor reaction products of turailose and 1-kestose with glucosyltransferase (GW-S) of Streptococcus sobrini~s BR24C were TEX>\6^{3}$-$\alpha$-D-glucopyranosyl \3^{2}$-O-$\alpha$-D-fructose (glucose-fructose-glucose) and \6^{4}$-$\alpha$-D-glucopyranosyl \1^{3}$-$\beta$-D-~-h~ctofuranos~~ sucrose (glucose-glucosefructose- fructose). respectively These are novel oligosaccharides which can be produced only by enzymatic reaction.

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Study on Nonlinearites of Short Term, Beat-to-beat Variability in Cardiovascular Signals (심혈관 신호에 있어서 단기간 beat-to-beat 변이의 비선형 역할에 관한 연구)

  • Han-Go Choi
    • Journal of Biomedical Engineering Research
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    • v.24 no.3
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    • pp.151-158
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    • 2003
  • Numerous studies of short-term, beat-to-beat variability in cardiovascular signals have used linear analysis techniques. However, no study has been done about the appropriateness of linear techniques or the comparison between linearities and nonlinearities in short-term, beat-to-beat variability. This paper aims to verify the appropriateness of linear techniques by investigating nonlinearities in short-term, beat-to-beat variability. We compared linear autoregressive moving average(ARMA) with nonlinear neural network(NN) models for predicting current instantaneous heart rate(HR) and mean arterial blood pressure(BP) from past HRs and BPs. To evaluate these models. we used HR and BP time series from the MIMIC database. Experimental results indicate that NN-based nonlinearities do not play a significant role and suggest that 10 technique provides adequate characterization of the system dynamics responsible for generating short-term, beat-to-beat variability.

Variation of Soil Characteristics for Soil Color Groups in Jeju-Do (토색분류(土色分類)에 의(依)한 제주도(濟州道) 토양(土壤)의 변이분석(變異分析))

  • Park, Chang-Seo;Um, Ki-Tae;Kim, Lee-Yul
    • Korean Journal of Soil Science and Fertilizer
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    • v.17 no.2
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    • pp.141-146
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    • 1984
  • Variation of soil characteristics and purity were examined within mapping unit and estimates were given for the number of samples required to reach predetermined levels of accuracy for black soil, VDBr. soil, DBr. soil, and brown soil in Jeju. Variation of chemical properties except pH and CEC was higher than that of physical properties. Brown soil showed the lowest variation and hence required the smallest sample size. The soils examined were correctly classified with regard to brown soil at purity 74.1, to DBr. soil 60.8, to black soil 55.6, and to VDBr. soil 46.9%. Sample calculation was presented which showed approximate sample sizes required to detect the difference of 10 and 20% of the mean with 0.95 confidence level.

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Ten Cases of R53H Variant of PAH Gene in Benign Hyperphenylalaninemia (PAH 유전자의 R53H 유전자변이를 보인 양성 고페닐알라닌혈증 10례)

  • Lee, Jiyun;Lee, Jeongho;Lee, Dong Hwan
    • Journal of The Korean Society of Inherited Metabolic disease
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    • v.17 no.1
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    • pp.11-17
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    • 2017
  • Purpose: Phenylketonuria (PKU) results from a deficiency of phenylalanine hydroxylase (PAH). The mutation of the PAH gene results in decreased phenylalanine hydroxylase enzyme activity in hyperphenylalaninemia (HPA) patients. This study reports ten cases of patients with the benign HPA genotype c.158G>A (p.Arg53His, R53H) variant in the PAH gene and aims to evaluate the clinical significance of the R53H variant. Methods: Ten Korean patients with the HPA genotype the R53H variant were included in this study. A retrospective medical record review was conducted. We characterized the phenotypes of the patients with HPA with the R53H variant using the following system: classic PKU, moderate PKU, mild PKU, Mild HPA, and benign HPA. Results: Five patients had the R53H variant with the "Pathogenic" variants (R413P, R241C, $Y356^*$, c.442-1G>A, $Y325^*$), Two patients had the "Likely pathogenic" variants ($W187^*$, A259T), Two patients had the "Uncertain significance" variants (R53H, G344D), and One patient had the "Not provided" variant (c.1066-14C>G). Nine patients genotyped with the R53H variant were the patient with benign HPA and One patient genotyped with the R53H homozygote was within normal range of plasma phenylalanine. None of the ten patients required dietary restriction of phenylalanine or pharmacotherapy to maintain their plasma phenylalanine levels and showed no clinical symptoms of HPA. Conclusion: Ten patients with HPA genotype the R53H variant were the patient with benign HPA and showed no clinical symptoms of HPA. Thus, the R53H variant, which was previously classified as an "Uncertain significance" mutation in HPA patients, should be re-classified as "Benign."

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