• Title/Summary/Keyword: xSelection

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Genetic Linkage Plays an Important Role in Maintaining Genetic Variability under Stabilizing Selection in Changing Environment

  • Jeung, Min-Gull;Janes N. Thompson, Jr;Lee, Chung-Choo
    • Animal cells and systems
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    • v.1 no.4
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    • pp.619-627
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    • 1997
  • Maintenance of polymorphism in a two-locus system with two alleles under stabilizing selection has been tested by Monte-Carlo simulation. The effect of each allele was additive. Only gene x environment interactions and degree of genetic linkage between loci were considered. There were no other evolutionary forces acting except stabilizing selection. Fixation rates were influenced by the extent of environmental change and the degree of genetic linkage. In most cases, stabilizing selection depleted genetic variability when two loci have a lower degree of linkage (10 cM). When two loci are closely linked (0.1 cM), however, stabilizing selection promoted balanced heterozygotes in changing environments. Thus, environment-dependent selection and recombination rate are important parameters which should be incorporated into mechanisms of maintenance of genetic variability.

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Development of a Model for Winner Prediction in TV Audition Program Using Machine Learning Method: Focusing on Program (머신러닝을 활용한 TV 오디션 프로그램의 우승자 예측 모형 개발: 프로듀스X 101 프로그램을 중심으로)

  • Gwak, Juyoung;Yoon, Hyun Shik
    • Knowledge Management Research
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    • v.20 no.3
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    • pp.155-171
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    • 2019
  • In the entertainment industry which has great uncertainty, it is essential to predict public preference first. Thanks to various mass media channels such as cable TV and internet-based streaming services, the reality audition program has been getting big attention every day and it is being used as a new window to new entertainers' debut. This phenomenon means that it is changing from a closed selection process to an open selection process, which delegates selection rights to the public. This is characterized by the popularity of the public being reflected in the selection process. Therefore, this study aims to implement a machine learning model which predicts the winner of , which has recently been popular in South Korea. By doing so, this study is to extend the research method in the cultural industry and to suggest practical implications. We collected the data of winners from the 1st, 2nd, and 3rd seasons of the Produce 101 and implemented the predictive model through the machine learning method with the accumulated data. We tried to develop the best predictive model that can predict winners of by using four machine learning methods such as Random Forest, Decision Tree, Support Vector Machine (SVM), and Neural Network. This study found that the audience voting and the amount of internet news articles on each participant were the main variables for predicting the winner and extended the discussion by analyzing the precision of prediction.

Study on the Improvement of Indirect Intra-Oral Dental Digital X-ray Image Sensor with Optical Coupling

  • Whang, Joo-Ho;Chung, Jin-Bum;Kim, Tae-Woo
    • Nuclear Engineering and Technology
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    • v.33 no.5
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    • pp.514-525
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    • 2001
  • Optimum characteristics of digital X-ray sensor components were analyzed to develop intra- oral dental digital X-ray image sensor using indirect method. Parametric analysis was carried out to optimize the phosphor thickness and the fiber optic plate (FOP) coupling to charge coupled device (CCD). X-ray absorption and light diffusion in the phosphor layer were analyzed by the Monte Carlo method. Real time X-ray image was obtained with prototype X- ray image sensor using general CCD camera with 1∼10 Ip/mm resolution. It has been previously shown that large resolution degradation in X-ray images was caused by miss alignment of FOP to CCD and optical adhesive selection. In this study, we reported that X-ray image quality was greatly improved by using optimized characteristics of alignment device and phosphor thickness.

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A study on log-density with log-odds graph for variable selection in logistic regression (로지스틱회귀모형의 변수선택에서 로그-오즈 그래프를 통한 로그-밀도비 연구)

  • Kahng, Myung-Wook;Shin, Eun-Young
    • Journal of the Korean Data and Information Science Society
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    • v.23 no.1
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    • pp.99-111
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    • 2012
  • The log-density ratio of the conditional densities of the predictors given the response variable provides useful information for variable selection in the logistic regression model. In this paper, we consider the predictors that are needed and how they should be included in the model. If the conditional distributions are skewed, the distributions can be considered as gamma distributions. Under this assumption, linear and log terms are generally included in the model. The log-odds graph is a very useful graphical tool in this study. A graphical study is presented which shows that if the conditional distributions of x|y for the two groups overlap significantly, we need both the linear and quadratic terms. On the contrary, if they are well separated, only the linear or log term is needed in the model.

Relative strength of 5' splice-site strength defines functions of SRSF2 and SRSF6 in alternative splicing of Bcl-x pre-mRNA

  • Choi, Namjeong;Liu, Yongchao;Oh, Jagyeong;Ha, Jiyeon;Ghigna, Claudia;Zheng, Xuexiu;Shen, Haihong
    • BMB Reports
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    • v.54 no.3
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    • pp.176-181
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    • 2021
  • Bcl-x, a member of the Bcl-2 family, plays a key role in apoptosis. Alternative splicing of Bcl-x pre-mRNA through alternative 5' splice-site selection produces an anti-apoptotic mRNA isoform that includes exon 2b and a pro-apoptotic Bcl-x mRNA isoform that excludes exon 2b. Here we used Bcl-x minigene and identified SRSF2 and SRSF6 as two regulatory factors of 5' splice-site selection of Bcl-x pre-mRNA. We selected binding clusters closer to 5' splice-sites from multiple potential binding sites of SRSF2 and SRSF6 to perform loss of functions analysis through site-directed mutagenesis. Our results demonstrated that these mutations did not abolish regulatory functions of SRSF2 or SRSF6, indicating that a single binding motif or a cluster was not a functional target of these proteins in Bcl-x pre-mRNA splicing. Random deletion mutagenesis did not disrupt the role of SRSF2 and SRSF6. Importantly, mutagenesis of 5' splice-site to a conserved or a weaker score demonstrated that the weaker strength of the target 5' splice-site or higher strength of the other 5' splice-site strength limited the role of SRSF2 and SRSF6 in 5' splice-site activation.

An Adaptive Virtual Machine Location Selection Mechanism in Distributed Cloud

  • Liu, Shukun;Jia, Weijia
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.9 no.12
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    • pp.4776-4798
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    • 2015
  • The location selection of virtual machines in distributed cloud is difficult because of the physical resource distribution, allocation of multi-dimensional resources, and resource unit cost. In this study, we propose a multi-object virtual machine location selection algorithm (MOVMLSA) based on group information, doubly linked list structure and genetic algorithm. On the basis of the collaboration of multi-dimensional resources, a fitness function is designed using fuzzy logic control parameters, which can be used to optimize search space solutions. In the location selection process, an orderly information code based on group and resource information can be generated by adopting the memory mechanism of biological immune systems. This approach, along with the dominant elite strategy, enables the updating of the population. The tournament selection method is used to optimize the operator mechanisms of the single-point crossover and X-point mutation during the population selection. Such a method can be used to obtain an optimal solution for the rapid location selection of virtual machines. Experimental results show that the proposed algorithm is effective in reducing the number of used physical machines and in improving the resource utilization of physical machines. The algorithm improves the utilization degree of multi-dimensional resource synergy and reduces the comprehensive unit cost of resources.

Sex and Population Differences in Intelligence Are Partly Caused by Sexual Selection: Hn Evolutionary Hypothesis

  • Piffer, Davide
    • Interdisciplinary Bio Central
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    • v.6 no.4
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    • pp.2.1-2.7
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    • 2014
  • Sexual dimorphism in intelligence suggests that this phenotype is a sexually selected trait. This view is supported by an overrepresentation (compared to the autosomal genome) of genes affecting cognition on the X chromosome. The aim of this study is to test the hypothesis that sexual selection can explain sex and country-level differences in performance on tests of fluid intelligence. Nationally representative samples from N = 44 countries were obtained from the Programme for International Student Assessment (PISA) Creative Problem Solving (CPS), which evaluates the core of intelligence, that is novel problem solving ability. Sexual selection has the double effect of increasing the prevalence of a favored phenotype and reducing genetic variation in sexually selected traits. Matching these predictions from evolutionary theory, the average country fluid intelligence is positively correlated to sexual dimorphism after partialling out per capita GDP and the latter in turn is inversely correlated to variance in intelligence scores within populations. Males have a higher variance than females but there is a negative correlation between male-female difference in variance and sexual dimorphism in intelligence, suggesting that selection reduces variance more in the selected sex. Average country male height is negatively correlated to sexual dimorphism in intelligence, a fact that supports the notion of a trade-off between physical and intellectual competition in the context of access to females. The results of this study, if replicated, imply that genome-wide association studies of cognition may benefit from a focus on sex chromosomes, which so far have been neglected. Another implication of this study is that intelligence has continued to evolve after different human populations migrated out of Africa and possibly up to the 19th century, as suggested by the substantial variability in sex differences even between neighbouring countries.

Fast Intra Mode Selection Algorithm Based on Edge Activity in Transform Domain for H.264/AVC Video (변환영역에서의 에지활동도에 기반한 H.264/AVC 고속 인트라모드 선택 방법)

  • Seo, Jae-Sung;Kim, Dong-Hyung
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.34 no.8C
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    • pp.790-800
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    • 2009
  • For the improvement of coding efficiency, the H.264/AYC standard uses new coding tools such as 1/4-pel-accurate motion estimation, multiple references, intra prediction, loop filter, variable block size etc. Using these coding tools, H.264/AYC has achieved significant improvements from rate-distortion point of view compared to existing standards. However, the encoder complexity was greatly increased due to these coding tools. We focus on the complexity reduction method of intra macroblock mode selection. The proposed algorithm for fast intra mode selection calculates the edge activity in transform domain, and performs fast encoding of intra frame in H.264/AYC through the fast prediction mode selection of intra4x4 and chrominance blocks. Simulation results show that the proposed method saves about 59.76% for QCIF sequences and 65.03% for CIF sequences of total encoding time, while bitrate increase and PSNR decrease are very small.

Maximizing the Selection Response by Optimal Quantitative Trait Loci Selection and Control of Inbreeding in a Population with Different Lifetimes between Sires and Dams

  • Tang, G.Q.;Li, X.W.;Zhu, L.;Shuai, S.R.;Bai, L.
    • Asian-Australasian Journal of Animal Sciences
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    • v.21 no.11
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    • pp.1559-1571
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    • 2008
  • A rule was developed to constrain the annual rate of inbreeding to a predefined value in a population with different lifetimes between sires and dams, and to maximize the selection response over generations. This rule considers that the animals in a population should be divided into sex-age classes based on the theory of gene flow, and restricts the increase of average inbreeding coefficient for new offspring by limiting the increase of the mean additive genetic relationship for parents selected. The optimization problem of this rule was formulated as a quadratic programming problem. Inputs for the rule were the BLUP estimated breeding values, the additive genetic relationship matrix of all animals, and the long-term contributions of sex-age classes. Outputs were optimal number and contributions of selected animals. In addition, this rule was combined with the optimization of emphasis given to QTL, and further increased the genetic gain over the planning horizon. Stochastic simulations of closed nucleus schemes for pigs were used to investigate the potential advantages obtained from this rule by combining the standard QTL selection, optimal QTL selection and conventional BLUP selection. Results showed that the predefined rates of inbreeding were actually achieved by this rule in three selection strategies. The rule obtained up to 9.23% extra genetic gain over truncation selection at the same rates of inbreeding. The combination of the extended rule and the optimization of emphasis given to QTL allowed substantial increases in selection response at a fixed annual rate of inbreeding, and solved substantially the conflict between short-term and long-term selection response in QTL-assisted selection schemes.