• Title/Summary/Keyword: virus diagnosis

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Isolation of akabane virus and its molecular diagnosis by reverse transcription polymerase chain reaction (아까바네 바이러스의 분리 및 RT-PCR 진단법에 관한 연구)

  • Cho, Jae-jin;Lee, Chung-gil;Park, Bong-kyun;Chang, Chung-ho;Chung, Chung-won;Cho, In-soo;An, Soo-hwan
    • Korean Journal of Veterinary Research
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    • v.40 no.1
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    • pp.42-48
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    • 2000
  • Akabane disease is transmitted through mosquitoes in cattle, sheep and goats. It shows congenital abnormalities including encephalomyetitis, hydranencephaly, neurogenic arthrogryposis, and deformed neonatal calves. Akabane viruses, 93FMX and K-9 strain, were isolated from fetal matrix of aborted cow and blood of healthy cow, respectively. S gene sequences of 93FMX and K-9 showed 100% homology with that of OBE-1 strain isolated in Japan. Based upon our sequencing data, we synthesized specific primers for PCR diagnosis. Using these primers, we were able to amplify the S gene of Akabane virus not only from the culture fluid of Vero cells but also from the brain tissue of suckling mouse inoculated with, Akabane virus. These PCR products were confirmed by Southern blot hybridization. Not only the sensitivity of PCR test was high enough to detect the viruses of $10^{1.0}TCID_{50}/ml$, but also the time for diagnosis was significantly shorter than that of the virus isolation by tissue culture method. This method was also effective for the detection of Akabane virus in the cerebrum of fetus. RT-PCR method may be used for a useful diagnostic test of the clinical cases of Akabane disease.

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A study on an Infrastructure for Virus Protection (바이러스 차단 인프라 구조에 관한 연구)

  • Noh, Si-Choon;Kim, Su-Hee;J. Kim, Kui-Nam
    • Convergence Security Journal
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    • v.5 no.1
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    • pp.53-62
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    • 2005
  • Virus protection infrastructure managementis network infrastructure management, traffic route management, virus protection zone expansion, and virus protection management for gateway area. This research paper provides a diagnosis of characteristics and weaknesses of the structure of existing virus protection infrastructure, and recommends an improved multi-level virus protection infrastructure as a measure for correcting these weaknesses. Improved virus protection infrastructure filters unnecessary mail at the gateway stage to reduce the load on server. As a result, numberof transmission accumulation decreases due to the reduction in the CPU load on the Virus wall and increase in virus treatment rate.

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Multi-level Protection Infrastructure for Virus Protection (다단계 바이러스 차단 구조 연구)

  • 노시춘;김귀남
    • Proceedings of the Korea Information Assurance Society Conference
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    • 2004.05a
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    • pp.187-198
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    • 2004
  • Virus protection infrastructure management is network infrastructure management, traffic route management, virus protection zone expansion, and virus protection management for gateway area. This research paper provides a diagnosis of characteristics and weaknesses of the structure of existing virus protection infrastructure, and recommends an improved multi-level virus protection infrastructure as a measure for correcting these weaknesses. Unproved virus protection infrastructure fitters unnecessary mail at the gateway stage to reduce the toad on server. As a result, number of transmission accumulation decreases due to the reduction in the CPU load on the Virus wall and increase in virus treatment rate.

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Application on Microwave Energy in the Preparation of Fish Samples for Electron Microscopic Observation

  • Kim Soo Jin;Oh Hae Keun;Song Young-Hwan;Chung Hyun-Do;Kim Young-Tae;Park Nam-Kyu;Choi Tae-Jin
    • Fisheries and Aquatic Sciences
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    • v.1 no.2
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    • pp.187-191
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    • 1998
  • Chemotherapy can not be applied for the control of fish viral diseases because viruses depend on host machinery for their replication. Although new control strategies including vaccination are under development, avoidance of virus introduction by rapid and correct diagnosis is the best way of fish viral disease control. Although observation of virus particles with an electron microscope is an easy method for virus detection, it take a few days for the sample preparation. In order to shorten the sample preparation time, microwave radiation was applied in the procedure. With this method, 15 seconds was enough for fixation of virus infected fish samples or cultured cells inoculated with infectious hematopoietic necrosis virus, which takes 2-4 hours with routine methods. Also four minutes was enough for polymerization of embedding resin which takes 24-48 hours with routine methods. Samples prepared with microwave were good enough for direct electron microscopic observation and immunogold labeling assay.

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Rapid Identification of Jasmine Virus H Infecting Ixora coccinea by Nanopore Metatranscriptomics

  • Sung-Woong Kim;Hyo-Jeong Lee;Sena Choi;In-Sook Cho;Rae-Dong Jeong
    • The Plant Pathology Journal
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    • v.39 no.3
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    • pp.303-308
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    • 2023
  • The global climate change and international trade have facilitated the movement of plants across borders, increasing the risk of introducing novel plant viruses in new territories. Ixora coccinea exhibited virus-like foliar symptoms, including mosaic and mild mottle. An Oxford Nanopore Technologies-based compact and portable MinION platform was used to identify the causal viral pathogen. The complete genome sequence of jasmine virus H (JaVH; 3867 nt, JaVH-CNU) was determined and found to share 88.4-90.3% nucleotide identity with that of Jasminum sambac JaVH isolate in China. Phylogenetic analysis based on the complete amino acid sequences of RNA-dependent RNA polymerase and coat protein revealed that JaVH-CNU was grouped separately with other JaVH isolates. This is the first report of a natural JaVH infection of I. coccinea. The application of rapid nanopore sequencing for plant virus identification was demonstrated and is expected to provide accurate and rapid diagnosis for virus surveillance.

Occurrence of Virus Diseases on Major Crops in 2009 (2009년 우리나라 주요 작물 바이러스병 발생 상황)

  • Choi, Hong-Soo;Lee, Su-Heon;Kim, Mi-Kyeong;Kwak, Hae-Ryun;Kim, Jeong-Soo;Cho, Jeom-Deog;Choi, Gug-Seoun
    • Research in Plant Disease
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    • v.16 no.1
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    • pp.1-9
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    • 2010
  • Among the plant specimens requested from agricultural actual places of farmers, Agency of agricultural extension services and so forth for the diagnosis of plant virus diseases in 2009, the rate of crop types was 87.5% for vegetables, 4.0% for upland crops and 3.5% for orchids. In vegetables, the crops damaged severely by viral diseases were red pepper and tomato by the infection rate of 51.6% and 26.5%, orderly. Virus species occurring vegetables were 19 and the economically important viruses were Cucumber mosaic virus (CMV), Tomato spotted wilt virus (TSWV), Tomato yellow leaf curl virus (TYLCV), Pepper mild mottle virus (PMMoV) with the infection rate of 33.2%, 16.9%, 16.1% and 7.4%, respectively. Rice stripe virus (RSV) occurred at the whole areas of west coast in Korea in 2009, and its incidence was 14.2% mainly on the susceptible cultivars and yield loss was estimated up to 50%. TYLCV was spread at 34 areas of Si and/or Gun, 22 areas in 2009 and 12 in 2008. Distribution of TSWV was expanded newly in 6 areas of Si and/or Gun including Gangryung, Gangwondo in 2009, and its occurrence areas were 23 Si and/or Gun after first incidence at Anyang area in 2004. Tomato bushy stunt virus (TBSV) was incited newly at Gimcheon area in 2009 with the infection rate of 65.2%, and its soil transmission rate was 55.0% in average.

Abnormality on Liver Function Test

  • Kang, Ki-Soo
    • Pediatric Gastroenterology, Hepatology & Nutrition
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    • v.16 no.4
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    • pp.225-232
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    • 2013
  • Children with abnormal liver function can often be seen in outpatient clinics or inpatients wards. Most of them have respiratory disease, or gastroenteritis by virus infection, accompanying fever. Occasionally, hepatitis by the viruses causing systemic infection may occur, and screening tests are required. In patients with jaundice, the tests for differential diagnosis and appropriate treatment are important. In the case of a child with hepatitis B virus infection vertically from a hepatitis B surface antigen positive mother, the importance of the recognition of immune clearance can't be overstressed, for the decision of time to begin treatment. Early diagnosis changes the fate of a child with Wilson disease. So, screening test for the disease should not be omitted. Non-alcoholic fatty liver disease, which is mainly discovered in obese children, is a new strong candidate triggering abnormal liver function. Muscular dystrophy is a representative disease mimicking liver dysfunction. Although muscular dystrophy is a progressive disorder, and early diagnosis can't change the fate of patients, it will be better to avoid parent's blame for delayed diagnosis.

Diagnosis of Human Immunodeficiency Virus Infection (사람면역결핍바이러스 감염의 진단)

  • Shi Nae Yu
    • The Korean Journal of Medicine
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    • v.99 no.1
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    • pp.32-36
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    • 2024
  • Early diagnosis and early treatment of human immunodeficiency virus (HIV) infection are essential for clinical and public health benefits. Diagnostic algorithms for early diagnosis are being emphasized, and rapid tests at the point of care have been expanded to improve voluntary testing rates. Despite advances in laboratory diagnostic tests, early HIV infection can still be missed due to window periods, and it is crucial to recognize the limitations of testing methods and the potential for false negative and false positive results.

Herpes Infection (임상가를 위한 특집 3 - 헤르페스 감염)

  • Lee, Sang-Shin;Lee, Suk-Keun
    • The Journal of the Korean dental association
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    • v.48 no.5
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    • pp.365-370
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    • 2010
  • Herpes virus family is highly infectious to patients, their families and dentists. The diagnosis of herpes infection is based on the characteristic clinical appearance and the location of the lesions. Herpes Simplex Virus(HSV) usually acquired through direct contact with infected lesions or body fluids, and the prevalence of HSV infection increases progressively from childhood. Primary infections provoke herpetic gingivostomatis typically affects the tongue, lips, gingival, buccal mucosa and palate. Recurrent infections give rise to vesiculo-ulcerative lesions at vermilion border of lip(herpes labialis). In the form of chickenpox, Varicella Zoster Virus(VZV) usually is infected in childhood. VZV spreads in the affected primary afferent nerve to the skin and produces a vesicular rash and pain. Epstein-Barr Virus(EBV) infects B cells and cause infectious mononucleosis. Latent EBV infection has also been implicated in Burkitt lymphoma, nasopharyngeal carcinoma. Cytomegalovirus(CMV) is associated with immune-compromised patient such as organ transplantation and AIDS patients.

Current Status of Epidemiology, Diagnosis, Therapeutics, and Vaccines for Novel Coronavirus Disease 2019 (COVID-19)

  • Ahn, Dae-Gyun;Shin, Hye-Jin;Kim, Mi-Hwa;Lee, Sunhee;Kim, Hae-Soo;Myoung, Jinjong;Kim, Bum-Tae;Kim, Seong-Jun
    • Journal of Microbiology and Biotechnology
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    • v.30 no.3
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    • pp.313-324
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    • 2020
  • Coronavirus disease 2019 (COVID-19), which causes serious respiratory illness such as pneumonia and lung failure, was first reported in Wuhan, the capital of Hubei, China. The etiological agent of COVID-19 has been confirmed as a novel coronavirus, now known as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), which is most likely originated from zoonotic coronaviruses, like SARS-CoV, which emerged in 2002. Within a few months of the first report, SARS-CoV-2 had spread across China and worldwide, reaching a pandemic level. As COVID-19 has triggered enormous human casualties and serious economic loss posing global threat, an understanding of the ongoing situation and the development of strategies to contain the virus's spread are urgently needed. Currently, various diagnostic kits to test for COVID-19 are available and several repurposing therapeutics for COVID-19 have shown to be clinically effective. In addition, global institutions and companies have begun to develop vaccines for the prevention of COVID-19. Here, we review the current status of epidemiology, diagnosis, treatment, and vaccine development for COVID-19.