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Evaluation of Recent Data Processing Strategies on Q-TOF LC/MS Based Untargeted Metabolomics

  • Kaplan, Ozan;Celebier, Mustafa
    • Mass Spectrometry Letters
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    • v.11 no.1
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    • pp.1-5
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    • 2020
  • In this study, some of the recently reported data processing strategies were evaluated and modified based on their capabilities and a brief workflow for data mining was redefined for Q-TOF LC-MS based untargeted metabolomics. Commercial pooled human plasma samples were used for this purpose. An ultrafiltration procedure was applied on sample preparation. Sample set was analyzed through Q-TOF LC/MS. A C18 column (Agilent Zorbax 1.8 µM, 50 × 2.1 mm) was used for chromatographic separation. Raw chromatograms were processed using XCMS - R programming language edition and Isotopologue Parameter Optimization (IPO) was used to optimize XCMS parameters. The raw XCMS table was processed using MS Excel to find reliable and reproducible peaks. Totally 1650 reliable and reproducible potential metabolite peaks were found based on the data processing procedures given in this paper. The redefined dataset was upload into MetaboAnalyst platform and the identified metabolites were matched with 86 metabolic pathways. Thus, two list were obtained and presented in this study as supplement files. The first list is to present the retention times and m/z values of detected metabolite peaks. The second list is the metabolic pathways related with the identified metabolites. The briefly described data processing strategies and dataset presented in this study could be beneficial for the researchers working on untargeted metabolomics for processing their data and validating their results.

The Development of Textile Designs and Cultural Products with the Image of the Spring Flowers on Halla Mountain (한라산 영구춘화(瀛邱春花) 이미지의 텍스타일 디자인 및 지역문화상품 개발)

  • Kim, Gi-eok;Hong, Heesook
    • Journal of the Korean Society of Clothing and Textiles
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    • v.39 no.2
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    • pp.307-322
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    • 2015
  • This study develops textile designs and cultural fashion products with the image of 'Youngguchunhwa', which means the beautiful spring flowers of Jeju. Historical literature was reviewed to emphasize the authenticity of Halla Mountain and Youngguchunhwa. Consumers' responses to Halla Mountain, Baengnokdam, and Royal Azalea related to Youngguchunhwa were evaluated along with photos of Halla Mountain and Youngguchunhwa images upload on Internet during the last 2 years. The results of consumer survey and photo analysis confirmed the consumers' high preference and high association with the image of Jeju. The full-blown Royal Azaleas in the Seonjakjiwat field of Halla Mountain were used as motifs for the development of Jeju cultural products as a representative landscape showing the beautiful spring of Jeju. Six types of textile designs were developed by the repeated arrangement of the basic patterns of Halla Mountain, Baengnokdam, and Royal Azalea. Ladies' apparels products, children's wear, bags and cushions were made using oxford cotton fabrics printed with the textile designs. We suggest how pattern designs of the Youngguchunhwa image could be applicable and used for the development of other kinds of Jeju tourism souvenirs.

MOPSO-based Data Scheduling Scheme for P2P Streaming Systems

  • Liu, Pingshan;Fan, Yaqing;Xiong, Xiaoyi;Wen, Yimin;Lu, Dianjie
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.13 no.10
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    • pp.5013-5034
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    • 2019
  • In the Peer-to-Peer (P2P) streaming systems, peers randomly form a network overlay to share video resources with a data scheduling scheme. A data scheduling scheme can have a great impact on system performance, which should achieve two optimal objectives at the same time ideally. The two optimization objectives are to improve the perceived video quality and maximize the network throughput, respectively. Maximizing network throughput means improving the utilization of peer's upload bandwidth. However, maximizing network throughput will result in a reduction in the perceived video quality, and vice versa. Therefore, to achieve the above two objects simultaneously, we proposed a new data scheduling scheme based on multi-objective particle swarm optimization data scheduling scheme, called MOPSO-DS scheme. To design the MOPSO-DS scheme, we first formulated the data scheduling optimization problem as a multi-objective optimization problem. Then, a multi-objective particle swarm optimization algorithm is proposed by encoding the neighbors of peers as the position vector of the particles. Through extensive simulations, we demonstrated the MOPSO-DS scheme could improve the system performance effectively.

Low Cost Cloud-Assisted Peer to Peer Live Streaming

  • Alghazawy, Bahaa Aldeen;Fujita, Satoshi
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.10 no.4
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    • pp.1732-1750
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    • 2016
  • Recently, Peer-to-Peer (P2P) live streaming assisted by the cloud computing has attracted considerable attention to improve the reliability of the P2P such as the resilience to peer churn and the shortage of upload capacity. The cost of cloud-assistance is comprised of the number of requests issued to the cloud and the amount of data fetched from the cloud. In this paper, we propose three techniques to reduce the cost of such a cloud-assistance.More concretely, in the proposed method, 1) each peer which lost its parent in the overlay can find a new parent by referring to the information registered in the cloud, 2) several peers which proactively fetch chunks from the cloud are dynamically invested, and 3) the number of requests issued to the cloud is reduced by allowing peers to fetch a collection of chunks using a single request. The performance of the proposed method is evaluated by simulation. The simulation results indicate that it reduces the cost of conventional scheme by 46% while guaranteeing the quality of live streaming service.

Development of A Prototype Device to Capture Day/Night Cloud Images based on Whole-Sky Camera Using the Illumination Data (정밀조도정보를 이용한 전천카메라 기반의 주·야간 구름영상촬영용 원형장치 개발)

  • Lee, Jaewon;Park, Inchun;cho, Jungho;Ki, GyunDo;Kim, Young Chul
    • Atmosphere
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    • v.28 no.3
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    • pp.317-324
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    • 2018
  • In this study, we review the ground-based whole-sky camera (WSC), which is developed to continuously capture day and night cloud images using the illumination data from a precision Lightmeter with a high temporal resolution. The WSC is combined with a precision Lightmeter developed in IYA (International Year of Astronomy) for analysis of an artificial light pollution at night and a DSLR camera equipped with a fish-eye lens widely applied in observational astronomy. The WSC is designed to adjust the shutter speed and ISO of the equipped camera according to illumination data in order to stably capture cloud images. And Raspberry Pi is applied to control automatically the related process of taking cloud and sky images every minute under various conditions depending on illumination data from Lightmeter for 24 hours. In addition, it is utilized to post-process and store the cloud images and to upload the data to web page in real time. Finally, we check the technical possibility of the method to observe the cloud distribution (cover, type, height) quantitatively and objectively by the optical system, through analysis of the captured cloud images from the developed device.

An Evaluation of Twitter Ranking Using the Retweet Information (재전송 정보를 활용한 트위터 랭킹의 정확도 평가)

  • Chang, Jae-Young
    • The Journal of Society for e-Business Studies
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    • v.17 no.2
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    • pp.73-85
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    • 2012
  • Recently, as Social Network Services(SNS), such as Twitter, Facebook, are becoming more popular, much research has been doing actively. However, since SNS has been launched recently, related researches are also infant level. Especially, search engines serviced in web potals simply show the postings in order of upload time. Searching the postings in Twitter should be different from web search, which is based on traditional TF-IDF. In this paper, we present the new method of searching and ranking the interesting postings in Twitter. In proposed method, we utilize the frequency of retweets as a major factor for estimating the quality of postings. It can be an important criteria since users tend to retweet the valuable postings. Experimental results show that proposed method can be applied successfully in Twitter search system.

Fountain Code-based Hybrid P2P Storage Cloud (파운틴 코드 기반의 하이브리드 P2P 스토리지 클라우드)

  • Park, Gi Seok;Song, Hwangjun
    • KIISE Transactions on Computing Practices
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    • v.21 no.1
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    • pp.58-63
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    • 2015
  • In this work, we present a novel fountain code-based hybrid P2P storage system that combines cloud storage with P2P storage. The proposed hybrid storage system minimizes data transmission time while guaranteeing high data retrieval and data privacy. In order to guarantee data privacy and storage efficiency, the user transmits encoded data after performing fountain code-based encoding. Also, the proposed algorithm guarantees the user's data retrieval by storing the data while considering each peer's survival probability. The simulation results show that the proposed algorithm enables fast completion of the upload transmission while satisfying the required data retrieval and supporting the privacy of user data under the system parameters.

Development of CAE Service Platform Based on Cloud Computing Concept (클라우드 컴퓨팅기반 CAE서비스 플랫폼 개발)

  • Cho, Sang-Hyun
    • Journal of Korea Foundry Society
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    • v.31 no.4
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    • pp.218-223
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    • 2011
  • Computer Aided Engineering (CAE) is very helpful field for every manufacturing industry including foundry. It covers CAD, CAM, and simulation technology also, and becomes as common sense in developing new products and processes. In South Korea, more than 600 foundries exist, and their average employee number is less than 40. Moreover, average age of them becomes higher. To break out these situations of foundry, software tools can be effective, and many commercial software tools had already been introduced. But their high costs and risks of investment act as difficulties in introducing the software tools to SMEs (Small and Medium size Enterprise). So we had developed cloud computing platform to propagate the CAE technologies to foundries. It includes HPC (High Performance Computing), platforms and software. So that users can try, enjoy, and utilize CAE software at cyber space without any investment. In addition, we also developed platform APIs (Application Programming Interface) to import not only our own CAE codes but also 3rd-party's packages to our cloud-computing platforms. As a result, CAE developers can upload their products on cloud platforms and distribute them through internet.

A Quantitative Analysis of System-Level Performance of the Wireless LAN in Digital Home Environments

  • Son, Byoung-Hee;Kim, Hag-Bae
    • Journal of Ubiquitous Convergence Technology
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    • v.2 no.1
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    • pp.51-55
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    • 2008
  • A digital home is a ubiquitous environment that is expected to be realized in the near future. All information appliances in a house are connected to each other through wired and/or wireless home networks. Authenticated user can access the various services provided by the digital home, and the access is not restricted by equipment, time, or location. The technologies that form the digital home can be grouped into two categories: wired networking technologies and wireless networking technologies. For the purpose of ubiquitous environments, wireless-networks offer suitable and seamless high-quality services. A wireless LAN can be created simply by equipping a single access point. For that reason, the cost of establishing such a network is low and using it is easy. Of course, there is an exciting new wireless technology. It is the Ultra Wide Band (UWB). However, it is not enough to bring wireless convenience, although offering a broad range of high-speed data transfer capabilities, Because of unstable. Thus, of the wireless-networking systems, we focus on the wireless LAN. We quantitatively analyze its capabilities. The dynamic and adaptive wireless LAN provides a foundation for the evolution toward the next generation of wireless and adaptive networks. The difference between wired LAN and wireless LAN in upload and download rates is small. Although the wireless LAN experiences a greater loss rate than the wired LAN, the difference is minimal. We conclude that a wireless LAN is suitable for use in an apartment environment.

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Cloud implementation within the company using FTP (FTP를 이용한 회사내 클라우드 구현)

  • Seo, Dong-hyeon;Kim, Mi-Seong
    • Proceedings of the Korean Institute of Information and Commucation Sciences Conference
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    • 2017.05a
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    • pp.472-474
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    • 2017
  • Storage of files is important in the information age. In particular, files in the company should be managed more efficiently. In this paper, we connect to FTP Server through Client program to manage files efficiently. The FTP Server builds a database to manage employee information in the company and folder paths for each employee. The Client program can be used after login with the assigned employee number and password. You can check the list of files stored in the FTP server when login is successful and upload, download and delete after selecting specific files. Folders can also be created and deleted for more systematic management of files. For the efficient operation of the company, it is implemented so that it can be divided into a personal drive and a public drive.

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