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The Expression Patterns of Human Parkin in E. codi and Mammalian Cells (대장균과 포유류 세포 내에서 parkin의 발현 양상에 관한 연구)

  • Nam Min-Kyung;Park Hye-Min;Choi Ju-Youn;Park Hyo-Jin;Chung Kwang Chul;Kang Seong man;Rhim Hyangshuk
    • Journal of Life Science
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    • v.15 no.6 s.73
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    • pp.916-922
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    • 2005
  • Parkin, known as an E3 ubiquitin ligase, has essential role in protein quality control, and its severe dysfunction leads to neurodegenerative disorders. Human Parkin was excessively degraded when expressed in Escherichia coli under the conventional induction condition ($37^{\circ}C$ culture condition with 0.5 mM IPTG). To optimize the induction and culture conditions for recombinant human Parkin and develop a rapid method for the Parkin purification, we expressed Parkin by using PCEX system at the different culture temperatures and IPTC concentrations. The intact Parkin protein was purified to approximately $90\%$ purity with suitable amounts of protein under the optimal culture condition ($25^{\circ}C$E with 0.01 mM IPTG). Additionally, we constructed various parkin plasmids with different tagging systems and investigated their expression patterns in HEK293 cells. We found that the proteolytically sensitive site is localized within a ubiquitin-like domain of Parkin. This study developes a method for generating useful reagents to investigate biochemical properties of Parkin.

Production of Diacylglycerol from Lipase by the Catalyzed Reaction of Soybean Oil and Glyceryl Monooleate (Lipozyme TLIM을 효소적 반응촉매로 이용한 glyceryl monooleate로부터의 diacylglycerol의 합성)

  • Jeon, Mi-Sun;Lee, Cho-Rong;Lee, Ki-Teak
    • Korean Journal of Food Science and Technology
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    • v.42 no.2
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    • pp.246-249
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    • 2010
  • Diacylglycerol (DAG) was produced from lipase by the catalyzed synthesis of soybean oil (SBO) and glyceryl monooleate (GMO) with Lipozyme TLIM (Thermomyces lanuginosa). Effects of reaction time, molar ratio and enzyme road were studied. When 2:1, 1:1 and 1:2 (SBO:GMO) molar ratios with 20% Lipozyme TLIM were applied in a 1-hr reaction, the concentrations of DAG produced were 17.8, 20.0 and 20.4 g/100 g oil, respectively. Different amounts (2, 5, 10 and 20%) of Lipozyme TLIM were used at a 1:2 (SBO:GMO) molar ratio, and the concentrations of DAG produced in a 1-hr reaction were 10.8, 14.0, 16.9 and 20.4 g/100 g oil, respectively. During a 72-hr reaction, 10.8-22.7 g/100 g oil of DAG were produced under the reaction conditions in this study.

Immobilization of Lipases on Amberlite and Their Interesterification Reaction Characteristics (Amberlite에 고정화된 Lipase 제조 및 효소적 Interesterification을 이용한 반응 특성 연구)

  • Park, So Ra;Lee, Ki Teak
    • Korean Journal of Food Science and Technology
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    • v.46 no.3
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    • pp.315-322
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    • 2014
  • Immobilized lipases were prepared by physical adsorption using lipase AK, AY, AH, PS and R on Amberlite$^{(R)}$XAD$^{(R)}$7 HP resin. With the immobilized lipases (10%), structured lipid was synthesized by enzymatic interesterification of canola oil, palmitic ethyl ester, and stearic ethyl ester in order to study the reaction characteristics. Among the lipase, the highest protein content was obtained from lipase AH (11.41%) before immobilization, while the highest levels of bound protein was observed from immobilized lipase AK (63.91%). Immobilized lipase AK had the highest interesterification activity (38.3% of total saturated fatty acid). Lipase AK was also used for a continuous reaction in which the slow flow of reactant resulted in increased reaction rate. Reusability of immobilized AK, AH and PS increased at the second reaction (120-196.5%). However, the activity of immobilized AK, which had the highest bound protein content (63.91%) decreased after the third reaction, while the activity of immobilized AH and PS was maintained until the sixth reaction.

Objective and Subjective Quality Characteristics of Pork Longissimus Muscle as a Function of the Ultimate pH

  • Cho, Byung-Wook;Oliveros, Maria Cynthia;Park, Kyoung-Mi;Do, Kyoung-Tag;Lee, Ki-Hwan;Seo, Kang-Seok;Choi, Jae-Gwan;Lee, Moon-Jun;Cho, In-Kyung;Choi, Byoung-Chul;Ryu, Kyeong-Seon;Hwang, In-Ho
    • Food Science of Animal Resources
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    • v.29 no.6
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    • pp.685-694
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    • 2009
  • The aim of the present study was to evaluate the variation in ultimate pH of commercial populations of pure-breed (Landrace, Duroc and Yorkshire) pig's longissimus muscles and their effect on objective meat quality traits and sensory characteristics. Fifty boars were sampled from 184 pigs, which were reared at three breeding farms and slaughtered at a commercial abattoir. The selection was determined based on ultimate pH, and animals were segregated into three groups: low pH (pH $\leq$ 5.5, n=13), medium pH (pH 5.5 to 5.6, n=18) and high pH (pH $\geq$ 5.6, n=16). The breeds had no significant effects; however, pigs with a higher ultimate pH had significantly (p<0.05) higher intramuscular fat content, lower level of polyunsaturated fatty acids, lower level of lipid oxidation and higher eating quality compared to those with lower ultimate pH. As the ultimate pH increased, the relative proportion of C14:0, C16:0 and C18:1 increased while C18:2n6 and C20:4n6 decreased. The present study demonstrates that the economic value of pigs can be characterized by the ultimate pH and/or intramuscular fat content. However, these results do not necessarily indicate that a high ultimate pH directly corresponds to high intramuscular fat content and vice versa.

COMPATIBILITY OF SELF-ETCHING DENTIN ADHESIVES WITH RESIN LUTING CEMENTS (자가부식형 상아질접착제와 레진시멘트와의 적합성에 관한 연구)

  • Kim, Do-Wan;Park, Sang-Jin;Choi, Kyoung-Kyu
    • Restorative Dentistry and Endodontics
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    • v.30 no.6
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    • pp.493-504
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    • 2005
  • This study was performed to investigate the compatibility between 4 dentin adhesives and 4 resin luting cements. Dentin adhesives used in this study were All-Bond 2 (Bisco Inc., Schaumbrug, IL, USA), Clearfil SE-Bond (Kuraray Medical Inc, Osaka, Japan), Prompt L-Pop (3M Dental Products, St. Paul, MN, USA), One-Up Bond F (Tokuyama corp., Tokyo, Japan) Resin luting cements used in this study were Choice (Bisco Inc., Schaumbrug, IL, USA), Panavia F (Kuraray Medical Inc, Osaka, Japan), RelyX ARC (3M Dental Products, St. Paul, MN, USA) Bistite II DC (Tokuyama corp., Tokyo, Japan). Combination of each dentin adhesive and corresponding resin cement was made to 16 experimental groups. Flat dentin surfaces was created on mid-coronal dentin of extracted mandibular third molars, then dentin surface was polished with 320-grit silicon carbide abrasive papers. Indirect resin composite block (Tescera, Bisco) was fabricated. Its surface for bonding to tooth was polished with silicon carbide abrasive papers Each dentin adhesive was treated on tooth surface and resin composite overlay were luted with each resin cement. Each bonded specimen was poured in epoxy resin and sectioned occluso-gingivally into 1.0mm thick slab, then further sectioned into $1.0{\times}1.0mm^2$ composite-dentin beams. Microtensile bond strength was tested at a crosshead speed of 1.0mm/min. The data were analysed by one-way ANOVA and Duncan's multiple comparison tests The results of this study were as follows, 2-step self-etching dentin adhesive which has additional bonding resin is more comparison than tests. self-etching dentin adhesive.

RHEOLOGICAL CHARACTERIZATION OF COMPOSITES USING A VERTICAL OSCILLATION RHEOMETER (수직 진동형 Rheometer를 이용한 복합레진의 유변학적 성질의 측정)

  • Lee, In-Bog;Cho, Byung-Hoon;Son, Ho-Hyun;Lee, Sang-Tag;Um, Chung-Moon
    • Restorative Dentistry and Endodontics
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    • v.29 no.6
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    • pp.489-497
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    • 2004
  • Objective: The purpose of this study was to investigate the viscoelastic properties related to handling characteristics of composite resins, Methods: A custom designed vertical oscillation rheometer (VOR) was used for rheological measurements of composites. The VOR consists of three parts: (1) a measuring unit, (2) a deformation induction unit and (3) a force detecting unit, Two medium viscous composites, Z100 and Z250 and two packable composites, P60 and SureFil were tested. The viscoelastic material function, including complex modulus $E^{*}$ and phase angle ${\delta}$, were measured. A dynamic oscillatory test was used to evaluate the storage modulus (E'), loss modulus (E") and loss tangent ($tan{\delta}$) of the composites as a function of frequency ($\omega$) from 0.1 to 20 Hz at $23^{\circ}C$. Results: The E' and E" increased with increasing frequency and showed differences in magnitude between brands. The $E^{*}s$ of composites at ${\omega}{\;}={\;}2{\;}Hz$, normalized to that of Z100, were 2.16 (Z250), 4,80 (P60) and 25.21 (SureFil). The magnitudes and patterns of the change of $tan{\delta}$ of composites with increasing frequency were significantly different between brands. The relationships between the complex modulus $E^{*}$, the phase angle ${\delta}$ and the frequency \omega were represented by frequency domain phasor form, $E^{*}{\;}(\omega){\;}={\;}E^{*}e^{i{\delta}}{\;}={\;}E^{*}{\angle}{\delta}$. Conclusions: The viscoelasticity of composites that influences handling characteristics is significant different between brands, The VOR is a relatively simple device for dynamic, mechanical analysis of high viscous dental composites. The locus of frequency domain phasor plots in a complex plane is a valuable method of representing the viscoelastic properties of composites.

RHEOLOGICAL PROPERTIES OF RESIN COMPOSITES ACCORDING TO THE CHANGE OF MONOMER AND FILLER COMPOSITIONS (단량체 및 무기질 filler 조성 변화에 따른 복합레진의 유변학적 특성)

  • Lee In-Bog;Lee Jong-Hyuck;Cho Byung-Hoon;Son Ho-Hyun;Lee Sang-Tag;Um Chung-Moon
    • Restorative Dentistry and Endodontics
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    • v.29 no.6
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    • pp.520-531
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    • 2004
  • The aim of this study was to investigate the effect of monomer and filler compositions on the rheological properties related to the handling characteristics of resin composites. Methods. Resin matrices that Bis-GMA as base monomer was blended with TEGDMA as diluent at various ratio were mixed with the Barium glass (0.7 um and 1.0 um), 0.04 um fumed silica and 0.5 um round silica. All used fillers were silane treated. In order to vary the viscosity of experimental composites, the type and content of incorporated fillers were changed, Using a rheometer, a steady shear test and a dynamic oscillatory shear test were used to evaluate the viscosity ($\eta$) of resin matrix, and the storage shear modulus (G'), the loss shear modulus (G"), the loss tangent ($tan{\delta}$) and the complex viscosity (${\eta}^*$) ofthe composites as a function of frequency ${\omega}{\;}={\;}0.1-100{\;}rad/s$. To investigate the effect of temperature on the viscosity of composites, a temperature sweep test was also undertaken. Results. Resin matrices were Newtonian fluid regardless of diluent concentration and all experimental composites exhibited pseudoplastic behavior with increasing shear rate. The viscosity of composites was exponentially increased with increasing filler volume%. In the same filler volume, the smaller the fillers were used, the higher the viscosities were. The effect of filler size on the viscosity was increased with increasing filler content. Increasing filler content reduced $tan{\delta}$ by increasing the G' further than the G". The viscosity of composites was decreased exponentially with increasing temperature.

INFLUENCE OF CAVITY SIZE AND RESTORATION METHODS ON THE CUSP DEFLECTION IN COMPOSITE RESTORATION (복합레진 수복시 와동의 크기 및 수복 방법이 교두 굴곡에 미치는 영향)

  • Lee Mi-Ra;Lee In-Bog;Seok Chang-In;Lee Sang-Tag;Um Chung-Moon
    • Restorative Dentistry and Endodontics
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    • v.29 no.6
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    • pp.532-540
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    • 2004
  • The aim of this study was to measure the cusp deflection during composite restoration for MOD cavity in premolar and to examine the influence of cavity dimension, C-factor and restoration method on the cusp deflection. Thirty extracted maxillary premolar were prepared to four different sizes of MOD cavity and divided into six groups. The width and depth of the cavity were as follows. Group 1; $1.5{\;}{\times}{\;}1{\;}mm$, Group 2; $1.5{\;}{\times}{\;}2{\;}mm$, Group 3; $3{\;}{\times}{\;}1{\;}mm$, and Group 4-6; $3{\;}{\times}{\;}2{\;}mm$ respectively. Group 1-4 were restored using bulk filling method with Z-250 composite. However, Group 5 was restored incrementally, and Group 6 was restored with an indirect resin inlay. The cusp deflection was recorded at the buccal and lingual cusp tips using LVDT probe for 10,000 seconds. The measured cusp deflections were compared between groups, and the relationship between the cube of the length of cavity wall/the cube of the thickness of cavity wall ($L^3/T^3$). C-factor and cusp deflection or % flexure ($100{\;}{\times}$ cuspal deflection / cavity width) was analyzed. The cusp deflection of Group 1-4 were $12.1{\;}\mu\textrm{m},{\;}17.2{\;}\mu\textrm{m},{\;}16.2{\;}\mu\textrm{m}{\;}and{\;}26.4{\;}\mu\textrm{m}$ respectively. The C-factor was related to the % flexure rather than the cusp deflection. There was a strong positive correlationship between the $L^3/T^3$ and the cusp deflection. The cusp deflection of Group 5 and 6 were $17.4{\;}\mu\textrm{m}{\;}and{\;}17.9{\;}\mu\textrm{m}$ respectively, which are much lower value than that of Group 4.

Detecting Errors in POS-Tagged Corpus on XGBoost and Cross Validation (XGBoost와 교차검증을 이용한 품사부착말뭉치에서의 오류 탐지)

  • Choi, Min-Seok;Kim, Chang-Hyun;Park, Ho-Min;Cheon, Min-Ah;Yoon, Ho;Namgoong, Young;Kim, Jae-Kyun;Kim, Jae-Hoon
    • KIPS Transactions on Software and Data Engineering
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    • v.9 no.7
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    • pp.221-228
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    • 2020
  • Part-of-Speech (POS) tagged corpus is a collection of electronic text in which each word is annotated with a tag as the corresponding POS and is widely used for various training data for natural language processing. The training data generally assumes that there are no errors, but in reality they include various types of errors, which cause performance degradation of systems trained using the data. To alleviate this problem, we propose a novel method for detecting errors in the existing POS tagged corpus using the classifier of XGBoost and cross-validation as evaluation techniques. We first train a classifier of a POS tagger using the POS-tagged corpus with some errors and then detect errors from the POS-tagged corpus using cross-validation, but the classifier cannot detect errors because there is no training data for detecting POS tagged errors. We thus detect errors by comparing the outputs (probabilities of POS) of the classifier, adjusting hyperparameters. The hyperparameters is estimated by a small scale error-tagged corpus, in which text is sampled from a POS-tagged corpus and which is marked up POS errors by experts. In this paper, we use recall and precision as evaluation metrics which are widely used in information retrieval. We have shown that the proposed method is valid by comparing two distributions of the sample (the error-tagged corpus) and the population (the POS-tagged corpus) because all detected errors cannot be checked. In the near future, we will apply the proposed method to a dependency tree-tagged corpus and a semantic role tagged corpus.

Development of Quality Competitiveness Assessment Model for RFID Tags in Apparel Retail (의류품 유통관리용 RFID 태그 품질경쟁력 평가모델 개발)

  • Kwon, Jongwon;Yang, Ilyoung;Song, Taeseung;Cho, Wonseo
    • Journal of the Institute of Electronics and Information Engineers
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    • v.52 no.7
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    • pp.143-152
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    • 2015
  • The 'Quality Competitiveness Index' (QCI) is defined as an quantitative and disinterested indicator that measures and compares the quality of products across the world. The purpose of this study is to suggest the 'Quality Competitiveness Assessment Model' (QCAM) and calculate QCI of a popular UHF RFID Label tag (Global ISO 18000-3C supported) available these days in a global apparel market. The model was based on KS-QEI(Korean Standard-Quality Excellence Index), and was composed with the following 4 evaluation categories, a process capability test, an environmental reliability test, a durability test and a design margin test. The QCI score can be calculated with the following formula, using the weighted arithmetic mean between a score of each evaluation category ($X_1$, $X_2$, $X_3$, $X_4$) and each weight($w_1$, $w_2$, $w_3$, $w_4$). The actual weights was determined by an result of AHP survey to which was conducted for the related Industry-University-Institute experts. The proposed index shows the results of comparisons with global competitor's products as well as the high-quality domestic RFID label tags. In addition, it will play an important role for manufacturers when developing their future products.