• 제목/요약/키워드: surrogate bacteria

검색결과 12건 처리시간 0.034초

Tracing surrogate bacteria inoculated on hide through the beef slaughtering process

  • Kim, Seongjoon;Kim, Sukwon;Kim, Sung Kwan;Choi, Kwanghoon;Kim, Jinman;Choe, Nonghoon
    • 대한수의학회지
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    • 제62권1호
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    • pp.5.1-5.5
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    • 2022
  • Many countries have imposed regulations relating to concerns that hide contamination will affect the cleanliness of abattoirs. However, South Korea has not indicated any clear criteria. The purpose of this study is to use surrogate bacteria to measure the contamination in abattoirs caused by contaminated cattle hides. The swab contact method and plate count method are used. Surrogate bacteria are found in most internal environments after the final process. These surrogates remained on the carcass even after the final washing process. This paper is the first study in South Korea that use surrogate bacteria to analyze contamination levels in abattoirs.

Antibacterial and virucidal activity of 28 extracts from plants endemic to Korea against Bacillus cereus, Staphylococcus aureus, and murine norovirus

  • Hyun-Joo Chang;Ji Hye Han;Nari Lee;Sung-Wook Choi
    • Journal of Applied Biological Chemistry
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    • 제66권
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    • pp.345-352
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    • 2023
  • Antibacterial activity against foodborne bacteria (Bacillus cereus, Staphylococcus aureus, Salmonella Enteritidis) and inhibitory activity against murine norovirus, a human norovirus surrogate, of 28 extracts from plants endemic to Korea were investigated in this study. All plant extracts showed antibacterial activity only against gram-positive bacteria, B. cereus and S. aureus. Extracts from Callistemon speciosus and Nymphaea tetragona showed inhibition zones of 16.54 and 24.35 mm against B. cereus and S. aureus, respectively, presenting the highest antibacterial activities recorded in this study. Among all samples, Ardisia japonica extract at concentrations of 100 and 200 ㎍/mL showed the highest virucidal activities of 96.6 and 100.0%, respectively. Ardisia japonica, Duchesnea indica, Polygonum aviculare, and Geum japonicum extracts showed high antibacterial and virucidal activity simultaneously without Raw 264.7 cell cytotoxicity. These plant extracts may serve as potential antimicrobials to control foodborne infections.

Caenorhabditis elegans 생체대체모델을 이용한 한국 영유아분변 유래 프로바이오틱스 균주의 in vivo 장 우점능 검토 (Rapid in vivo Colonization Screening of Probiotic Bacteria Isolated from Human Infants using Caenorhabditis elegans Surrogate Host)

  • 박미리;정은선;오상남;송민호;두재균;정용섭;문용일;김영훈
    • 한국축산식품학회지
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    • 제33권4호
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    • pp.522-530
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    • 2013
  • Probiotic 기능성이 우수한 유산균을 선발하기 위하여 9개월 미만의 모유수유아로부터 100종의 Lactobacillus균을 분리하였다. C. elegans를 이용한 in vivo 실험으로 장내 우점능을 검사하여 L. rhamnosus GG와 비교했을 때 다른 균주들보다 상대적으로 장환경에 대하여 우수한 우점특성을 갖는 probiotic 유산균주 9종을 선발하였다. Mucin을 이용한 in vitro 부착능력 검토결과, L. rhamnosus GG대비 90% 이상의 부착능을 보였으며, pH 2.5에서의 내산성 및 0.5% oxgall을 함유한 내담즙성에서 각각 97% 이상과 99% 이상의 높은 생존율을 나타냈다. 또, 81% 이상의 높은 콜레스테롤 저해능과 다양한 prebiotics 이용가능성을 확인하였고 최종적으로 L. rhamnosus 4종, L. plantarum 5종인 것으로 동정되었다. 이상의 결과로부터 in vivo 실험을 통해 우선 선발한 균주들이 프로바이오틱스 균주로서 요구되는 조건을 우수하게 충족시킨다는 것을 알 수 있었으며, 따라서 in vivo 모델로서 C. elegans을 이용한 장내우점능력 검토는 내산성, 내담즙성, 콜레스테롤 저하, 그리고 prebiotic 기질 이용능 등의 고기능성의 probiotic 균주 선발에 직접적으로 이용할 수 있을 것으로 기대된다.

Biosynthesis of Polymyxins B, E, and P Using Genetically Engineered Polymyxin Synthetases in the Surrogate Host Bacillus subtilis

  • Kim, Se-Yu;Park, Soo-Young;Choi, Soo-Keun;Park, Seung-Hwan
    • Journal of Microbiology and Biotechnology
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    • 제25권7호
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    • pp.1015-1025
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    • 2015
  • The development of diverse polymyxin derivatives is needed to solve the toxicity and resistance problems of polymyxins. However, no platform has generated polymyxin derivatives by genetically engineering a polymyxin synthetase, which is a nonribosomal peptide synthetase. In this study, we present a two-step approach for the construction of engineered polymyxin synthetases by substituting the adenylation (A) domains of polymyxin A synthetase, which is encoded by the pmxABCDE gene cluster of Paenibacillus polymyxa E681. First, the seventh L-threonine-specific A-domain region in pmxA was substituted with the L-leucine-specific A-domain region obtained from P. polymyxa ATCC21830 to make polymyxin E synthetase, and then the sixth D-leucine-specific A-domain region (A6-D-Leu-domain) was substituted with the D-phenylalanine-specific A-domain region (A6-D-Phe-domain) obtained from P. polymyxa F4 to make polymyxin B synthetase. This step was performed in Escherichia coli on a pmxA-containing fosmid, using the lambda Red recombination system and the sacB gene as a counter-selectable marker. Next, the modified pmxA gene was fused to pmxBCDE on the chromosome of Bacillus subtilis BSK4dA, and the resulting recombinant strains BSK4-PB and BSK4-PE were confirmed to produce polymyxins B and E, respectively. We also succeeded in constructing the B. subtilis BSK4-PP strain, which produces polymyxin P, by singly substituting the A6-D-Leu-domain with the A6-D-Phe-domain. This is the first report in which polymyxin derivatives were generated by genetically engineering polymyxin synthetases. The two recombinant B. subtilis strains will be useful for improving the commercial production of polymyxins B and E, and they will facilitate the generation of novel polymyxin derivatives.

중위도 산림토양에서 분리한 부식질 분해능이 있는 Pseudomonas kribbensis CHA-19의 유전체 염기서열 초안 (Draft genome sequence of humic substances-degrading Pseudomonas kribbensis CHA-19 from temperate forest soil)

  • 김덕규;이형석
    • 미생물학회지
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    • 제55권2호
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    • pp.177-179
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    • 2019
  • 미국 뉴저지주 중위도 산림토양에서 부식산(천연 복합유기화합물인 부식질의 주요 구성성분) 분해능이 있는 세균 균주 Pseudomonas kribbensis CHA-19를 분리하였으며, 이후 또 다른 토양 유기물인 리그닌과 리그닌 유래의 페룰산(ferulic acid)과 바릴린산(vanillic acid)의 분해능을 확인하였다. 부식질 초기 저분자화 효소(예, dye-decolorizing peroxidase와 laccase-like multicopper oxidase)와 부식질 유래의 다양한 저분자 분해산물들을 분해하는 효소(예, vanillate O-demethylase와 biphenyl 2,3-dioxygenase)를 탐색하기 위해 CHA-19 게놈염기서열을 분석하였다. 최종 확보한 효소유전자 정보는 토양세균의 부식질 분해경로 제안에 사용되었다.

Screening and Characterization of Lactic Acid Bacteria Strains with Anti-inflammatory Activities through in vitro and Caenorhabditis elegans Model Testing

  • Lee, Hye Kyoung;Choi, Sun-Hae;Lee, Cho Rong;Lee, Sun Hee;Park, Mi Ri;Kim, Younghoon;Lee, Myung-Ki;Kim, Geun-Bae
    • 한국축산식품학회지
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    • 제35권1호
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    • pp.91-100
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    • 2015
  • The present study was conducted to screen candidate probiotic strains for anti-inflammatory activity. Initially, a nitric oxide (NO) assay was used to test selected candidate probiotic strains for anti-inflammatory activity in cultures of the murine macrophage cell line, RAW 264.7. Then, the in vitro probiotic properties of the strains, including bile tolerance, acid resistance, and growth in skim milk media, were investigated. We also performed an in vitro hydrophobicity test and an intestinal adhesion assay using Caenorhabditis elegans as a surrogate in vivo model. From our screening, we obtained 4 probiotic candidate lactic acid bacteria (LAB) strains based on their anti-inflammatory activity in lipopolysaccharide (LPS)-stimulated RAW 264.7 cell cultures and the results of the in vitro and in vivo probiotic property assessments. Molecular characterization using 16S rDNA sequencing analysis identified the 4 LAB strains as Lactobacillus plantarum. The selected L. plantarum strains (CAU1054, CAU1055, CAU1064, and CAU1106) were found to possess desirable in vitro and in vivo probiotic properties, and these strains are good candidates for further investigations in animal models and human clinical studies to elucidate the mechanisms underlying their anti-inflammatory activities.

임상가를 위한 특집 2 - 치주 질환과 동맥경화성 심혈관 질환의 관계성에 대한 고찰과 치주처치 (The review and treatment regarding on association between periodontitis and atherosclerotic cardiovascular diseases)

  • 이효정
    • 대한치과의사협회지
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    • 제51권9호
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    • pp.501-510
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    • 2013
  • This paper reviews a current view regarding the association between periodontitis and atherosclerotic cardiovascular diseases (ACVD). Many evidences have suggested that there exist biological mechanisms by which periodontitis can lead to ACVD. Periodontal infection can lead to direct bacterial invasion into endothelial tissues through the blood stream, then the bacteria can activate the host inflammatory response followed by atheroma formation, maturation and exacerbation. Also, chronic periodontal infections may indirectly induce endothelial activation or dysfunction through a state of systemic inflammation as evidenced by elevated plasma acute proteins, IL-6 and fibrinogen as well. There is moderate evidence that periodontal treatment can reduce systemic inflammation and improvement of both clinical surrogate markers. But there is no periodontal intervention study available on primary ACVD prevention. There is consistent and strong epidemiologic evidence, including in vitro, animal and clinical studies, that periodontitis imparts increased risk for future ACVD. However, evidences from intervention trials to date are not sufficient to confirm the multi directional causality of periodontitis in ACVD etiology. Well-designed intervention trials on the impact of periodontal treatment on the prevention of ACVD outcomes are needed.

대청호 유역의 수질평가를 위한 종합수질지수의 적용 (Application of Korean Water Quality Index for the Assessment of River Water Quality in the Basin of Daecheong Lake)

  • 정세웅;박재호
    • 한국물환경학회지
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    • 제21권5호
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    • pp.470-476
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    • 2005
  • The Korean Water Quality Index (K-WQI) was applied to the rivers located in the watershed of Daecheong Lake to assess the status of river water quality, and propose potential target constituents for better water quality management in the watershed. The estimated K-WQI value for each river was varied from 70 to 90, and Youngdongcheon showed the worst score while Mujunamdeachen showed the best score. The total nitrogen (TN) and total coliform bacteria were identified as the most significant constituents that degrade the K-WQI values in the rivers. The correlation coefficients (r) were determined between K-WQI and the delivered specific load ($kg/km^2/yr$) of BOD, TN, and TP to justify potential target constituents that have a great influence on the improvement of K-WQI values. The results showed that TN (r=-0.86) and TP (r=-0.85) have a strong negative relationships with K-WQI, but BOD have almost no effect. This implies that BOD, the surrogate parameter for organic pollutants, is no more a feasible water quality variable for the water quality management in the study site.

고농도 세균, 독소, 바이러스 모의 생물 작용제에 대한 제독제 4종 효과 연구 (A Study on the Efficacy of Four Chemical Decontaminants against High-concentration Surrogates of Bacteria, Toxin, and Virus Biological Agents)

  • 박한울;서영환;이홍석;김성주
    • 한국군사과학기술학회지
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    • 제27권5호
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    • pp.642-648
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    • 2024
  • If a nation or a terrorist organization produced biological agents, they are likely stored in a form of liquid concentrate. In the present study, four chemical reagents, hydrogen peroxide, sodium dichloroisocyanurate (NaDCC), Perasafe, and DF200, were investigated on their potentials as safe, efficient and eco-friendly decontaminants for biological agents. Escherichia coli, α-amylase, and bacteriophage T4 were used as surrogate strains for biological agents. Hydrogen peroxide and DF200 showed drawbacks of a rapid heat evolution upon neutralization and thick foam building up, respectively. Perasafe was effective against E. coli and T4, but it did not inactivate α-amylase while the others were able to inactivate all three types of the surrogates. NaDCC was the most suitable decontaminant for its effectiveness against all three types of surrogates at low concentrations and being able to be neutralized without aforementioned problems.

Metabolic Regulation of Longevity and Immune Response in Caenorhabditis elegans by Ingestion of Lacticaseibacillus rhamnosus IDCC 3201 Using Multi-Omics Analysis

  • Daniel Junpyo Lee;Ju Young Eor;Min-Jin Kwak;Junbeom Lee;An Na Kang;Daye Mun;Hyejin Choi;Minho Song;Jong Nam Kim;Jun-Mo Kim;Jungwoo Yang;Hyung Wook Kim;Sangnam Oh;Younghoon Kim
    • Journal of Microbiology and Biotechnology
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    • 제34권5호
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    • pp.1109-1118
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    • 2024
  • Probiotics, specifically Lacticaseibacillus rhamnosus, have garnered attention for their potential health benefits. This study focuses on evaluating the probiotic properties of candidate probiotics L. rhamnosus IDCC 3201 (3201) using the Caenorhabditis elegans surrogate animal model, a well-established in vivo system for studying host-bacteria interactions. The adhesive ability to the host's gastrointestinal tract is a crucial criterion for selecting potential probiotic bacteria. Our findings demonstrated that 3201 exhibits significantly higher adhesive capabilities compared with Escherichia coli OP50 (OP50), a standard laboratory food source for C. elegans and is comparable with the widely recognized probiotic L. rhamnosus GG (LGG). In lifespan assay, 3201 significantly increased the longevity of C. elegans compared with OP50. In addition, preconditioning with 3201 enhanced C. elegans immune response against four different foodborne pathogenic bacteria. To uncover the molecular basis of these effects, transcriptome analysis elucidated that 3201 modulates specific gene expression related to the innate immune response in C. elegans. C-type lectin-related genes and lysozyme-related genes, crucial components of the immune system, showed significant upregulation after feeding 3201 compared with OP50. These results suggested that preconditioning with 3201 may enhance the immune response against pathogens. Metabolome analysis revealed increased levels of fumaric acid and succinic acid, metabolites of the citric acid cycle, in C. elegans fed with 3201 compared with OP50. Furthermore, there was an increase in the levels of lactic acid, a well-known antimicrobial compound. This rise in lactic acid levels may have contributed to the robust defense mechanisms against pathogens. In conclusion, this study demonstrated the probiotic properties of the candidate probiotic L. rhamnosus IDCC 3201 by using multi-omics analysis.