• 제목/요약/키워드: similarity coefficient

검색결과 438건 처리시간 0.022초

Genetic Diversity of Barley Cultivars as Revealed by SSR Masker

  • Kim, Hong-Sik;Park, Kwang-Geun;Baek, Seong-Bum;Suh, Sae-Jung;Nam, Jung-Hyun
    • 한국작물학회지
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    • 제47권5호
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    • pp.379-383
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    • 2002
  • Allelic diversity of 44 microsatellite marker loci originated from the coding regions of specific genes or the non-coding regions of barley genome was analyzed for 19 barley genotypes. Multi-allelic variation was observed at the most of marker loci except for HVM13, HVM15, HVM22, and HVM64. The number of different alleles ranged from 2 to 12 with a mean of 4.0 alleles per micro-satellite. Twenty-one alleles derived from 10 marker loci are specific for certain genotypes. The level of polymorphism (Polymorphic Information Content, PIC) based on the band pattern frequencies among genotypes was relatively high at the several loci such as HVM3, HVM5, HVM14, HVM36, HVM62 and HVM67. In the cluster analysis using genetic similarity matrix calculated from microsatellite-derived DNA profiles, two major groups were classified and the spike-row type was a major factor for clustering. Correlation between genetic similarity matrices based on microsatellite markers and pedigree data was highly significant ($r=0.57^{**}$), but these two parameters were moderately associated each other. On the other hand, RAPD-based genetic similarity matrix was more highly associated with microsatellite-based genetic similarity ($r=0.63^{**}$) than coefficient of parentage.

체적수축유동이 있는 일차원 다원합금 응고에 대한 확장된 해석해 (An Extended Similarity Solution for One-Dimensional Multicomponent Alloy Solidification in the Presence of Shrinkage-Induced Flow)

  • 정재동;유호선;최만수;이준식
    • 대한기계학회논문집B
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    • 제24권3호
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    • pp.426-434
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    • 2000
  • This paper deals with a generalized similarity solution for the one-dimensional solidification of ternary or higher-order multicomponent alloys. The present approach not only retains the existing features of binary systems such as temperature- solute coupling, shrinkage-induced flow, solid-liquid property differences, and finite back diffusion, but also is capable of handling a multicomponent alloy without restrictions on the partition coefficient and microsegregation parameter. For an alloy of N-solute species, governing equations in the mushy region reduce to (N+2) nonlinear ordinary differential equations via similarity transformation, which are to be solved along with the closed-form solutions for the solid and liquid regions. A linearized correction scheme adopted in the solution procedure facilitates to determine the solidus and liquidus positions stably. The result for a sample ternary alloy agrees excellently with the numerical prediction as well as the reported similarity solution. Additional calculations are also presented to show the utility of this study. Finally, it is concluded that the present analysis includes the previous analytical approaches as subsets.

Morphological and Genetic Diversity of Korean Native and Introduced Safflower Germplasm

  • Shim Kang-Bo;Bae Seok-Bok;Lim Si-Kyu;Suh Duck-Yong
    • 한국작물학회지
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    • 제49권4호
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    • pp.337-341
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    • 2004
  • Morphological and genetic diversity of thirty nine safflower germplasm were collected and evaluated by Principal Component Analysis (PCA) and Random Amplified Polymorphic DNA (RAPD) method. Stem length and seeding to flowering days of the safflower germplasm showed $26\~117cm\;and\;76\~179$ days of variation respectively. USA originated germplasm showed higher oil content as $39\%$, but that of Japanese showed lower as $26\%$. PCA made three different cluster groups according to some agronomic characteristics of safflower. Korea originated germplasm showed similar cluster group with that of collected from USA in the PCA of stem length. But in the seeding to flowering days, it showed similar cluster pattern with that of collected from Japan rather than USA. In the experiment of RAPD analysis, total five primers showed polymorphism at the several chromosomal loci. Korea, China Japan and South Central Asia originated germplasm were differently classified with USA and South West Asia originated germplasm with lower similarity coefficient value (0.47). Most of Korea originated germplasm were grouped with South Central Asia originated germplasm with higher similarity coefficient value (0.74) conferring similar genetic background between both of them. China and Japan originated germplasm were dendrogramed with Korea originated germplasm at the 0.65 and 0.50 similarity coefficient values respectively. Some common results were expected from both of PCA and RAPD analysis, but lower genetic heritability caused by relative higher portion of environmental variance and environment by genotype interaction at the expression of those of agronomic characteristics made constraint to find any reliable results.

주파수 재할당 문제 해결을 위한 타부 서치 알고리듬 개발 (Tabu Search Algorithm for Frequency Reassignment Problem in Mobile Communication Networks)

  • 한정희
    • 대한산업공학회지
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    • 제31권1호
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    • pp.1-9
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    • 2005
  • This paper proposes the heuristic algorithm for the generalized GT problems to consider the restrictions which are given the number of machine cell and maximum number of machines in machine cell as well as minimum number of machines in machine cell. This approach is split into two phase. In the first phase, we use the similarity coefficient which proposes and calculates the similarity values about each pair of all machines and sort these values descending order. If we have a machine pair which has the largest similarity coefficient and adheres strictly to the constraint about birds of a different feather (BODF) in a machine cell, then we assign the machine to the machine cell. In the second phase, we assign parts into machine cell with the smallest number of exceptional elements. The results give a machine-part grouping. The proposed algorithm is compared to the Modified p-median model for machine-part grouping.

Parameterization of Along-Wind Dispersion Coefficients based on Field and Wind Tunnel Data

  • Kang, Sung-Dae
    • Environmental Sciences Bulletin of The Korean Environmental Sciences Society
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    • 제10권S_1호
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    • pp.11-22
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    • 2001
  • Observations related to the along-wind dispersion of puffs were collected from 12 field sites and from a wind tunnel experiment and used to test simple similarity relations. Because most of the date made use of concentration time series observation from fixed monitors, the basic observation was t, the standard deviation of the concentration time series. This data also allowed the travel time, t, from the source to the receptor to be estimated, from which the puff advective speed ue, could be determined. The along-wind dispersion coefficient, x, was then assumed to equal tue. The data, which extended over four orders of magnitude, supported the similarity relations t=0.1 t and x=1.8 $u^*$t, where t is the travel time and $u^*$ is the friction velocity. About 50% of the observations were within a factor of two of the predictions based on the similarity relations.

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무 결합계수-회전변환의, 최적화된 유리함수 Fitting에 의한 효율적인 RF대역 여파기 설계기법 (An Efficient Design Method of RF Filters via Optimized Rational-Function Fitting, without Coupling-Coefficient Similarity Transformation)

  • 주정호;강승택;김형석
    • 한국정보통신설비학회:학술대회논문집
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    • 한국정보통신설비학회 2006년도 하계학술대회
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    • pp.202-204
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    • 2006
  • A new method is presented to design RF filters without the Similarity Transform of their coupling coefficient matrix as circuit parameters which is very tedious due to pivoting and deciding rotation angles needed during the iterations. The transfer function of a filter is directly used for the design and its desired form is derived by the optimized rational-function fitting technique. A 3rd order Coaxial Lowpass filter and an 8th order dual-mode elliptic integral function response filter are taken as an example to validate the proposed method.

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Empirical Comparison of Word Similarity Measures Based on Co-Occurrence, Context, and a Vector Space Model

  • Kadowaki, Natsuki;Kishida, Kazuaki
    • Journal of Information Science Theory and Practice
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    • 제8권2호
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    • pp.6-17
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    • 2020
  • Word similarity is often measured to enhance system performance in the information retrieval field and other related areas. This paper reports on an experimental comparison of values for word similarity measures that were computed based on 50 intentionally selected words from a Reuters corpus. There were three targets, including (1) co-occurrence-based similarity measures (for which a co-occurrence frequency is counted as the number of documents or sentences), (2) context-based distributional similarity measures obtained from a latent Dirichlet allocation (LDA), nonnegative matrix factorization (NMF), and Word2Vec algorithm, and (3) similarity measures computed from the tf-idf weights of each word according to a vector space model (VSM). Here, a Pearson correlation coefficient for a pair of VSM-based similarity measures and co-occurrence-based similarity measures according to the number of documents was highest. Group-average agglomerative hierarchical clustering was also applied to similarity matrices computed by individual measures. An evaluation of the cluster sets according to an answer set revealed that VSM- and LDA-based similarity measures performed best.

Parentage Identification of 'Daebong' Grape (Vitis spp.) Using RAPD Analysis

  • Kim, Seung-Heui;Jeong, Jae-Hun;Kim, Seon-Kyu;Paek, Kee-Yoeup
    • Journal of Plant Biotechnology
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    • 제4권2호
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    • pp.67-70
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    • 2002
  • The RAPD data were used to assess genetic similarity among f grape cultivars. Of the 100 random primers tested on genomic DNA, 10 primers could be selected for Benetic analysis, and the selected primers generated a total of 115 distinct amplification fragments. A similarity matrix was constructed on the basis of the presence or absence of bands. The 7 grape cultivars analyzed with UPGMA were clustered into two groups of A and B. The similarity coefficient value of cultivars was high. The mean similarity index for all pairwise comparisons was 0.851, and ranged from 0.714 ('Rosaki' and 'Black Olympia') to 0.988 ('Kyoho' and 'Daebong'). After due consideration of differences in cultural and morphological characteristics of these two theoretically identical cultivars, it could be deduced that 'Daebong' is a bud sport of 'Kyoho' cultivar.

그룹 테크놀러지에서의 기계 및 부품군을 형성하기 위한 발견적 해법 (A heuristic algorithm for forming machine cells and part families in group technology)

  • 이백
    • 대한산업공학회지
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    • 제22권4호
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    • pp.705-718
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    • 1996
  • A similarity coefficient based algorithm is proposed to solve the machine cells and part families formation problem in group technology. Similarity coefficients are newly designed from the machine-part incidence matrix. Machine cells are formed using a recurrent neural network in which the similarity coefficients are used as connection weights between processing units. Then parts are assigned to complete the cell composition. The proposed algorithm is applied to 30 different kinds of problems appeared in the literature. The results are compared to those by the GRAFICS algorithm in terms of the grouping efficiency and efficacy.

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초고주파용 필터설계를 위한 결합행렬 합성법 (Coupling Matrix Synthesis Methods for RF/Microwave Filter Design)

  • 최동묵;김채영
    • 한국통신학회논문지
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    • 제32권12A호
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    • pp.1346-1353
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    • 2007
  • 본 논문에서는 필터함수의 감쇄극점(poles)과 반사손실(Return Loss)로부터 전송계수($S_{21}$)와 반사계수($S_{11}$)를 도출하고, 이 값들로부터 대역통과필터 설계를 위한 결합계수행렬 계산법을 제시하였다. 계산된 결합계수행렬에 유사변환을 적용하여서 결합계수행렬을 접힌 표준형 필터 구조의 커플링계수 행렬로 변환하였다. 그 결과를 이용하여 접힌 표준형 필터를 설계하였다.