• 제목/요약/키워드: secondary isolates

검색결과 56건 처리시간 0.025초

2021년 경남지역 소바이러스성설사 바이러스(BVDV) 감염실태 조사 (Prevalence study of bovine viral diarrhea virus (BVDV) from cattle farms in Gyeongsangnam-do, South Korea in 2021)

  • 손용우;조성희;지정민;조재규;방상영;최유정;김철호;김우현
    • 한국동물위생학회지
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    • 제45권3호
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    • pp.211-219
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    • 2022
  • Bovine viral diarrhea (BVD) is one of the problematic wasting diseases in cattle leading to huge economic losses. This study was conducted to investigate the prevalence of BVD including transient and persistent infection from cattle farms in Gyeongsangnam-do. A total of 2,667 blood samples from 24 farms were collected and the sera were subjected to ELISA to detect BVD virus (BVDV) antigen, Erns. 5' untranslated region (5'-UTR) of BVDV-positive samples was sequenced to identify the genotype, and compared with isolates previously reported elsewhere. There were fourteen BVDV-positive calves from 2,667 samples (positive rate: 0.52%) from first ELISA testing followed by eight persistently infected out of eleven BVDV-positive samples (72.73%) in secondary ELISA that was conducted in at least four weeks suggesting the circulation of BVDV in the area. Sequencing analysis exhibited that thirteen BVDV-positive samples were identified as BVDV-1b and one sample was BVDV-2a. Phylogenetic analysis revealed that the BVDV-1b-positive samples showed the highest homology in nucleotide sequence to Korean isolates collected from Sancheong, Gyeongsangnam-do, while the BVDV-2a-positive sample (21GN7) was more similar to reference strains collected outside South Korea. This study will provide the recent fundamental data on BVD prevalence in Gyeongsangnam-do to be referred in developing strategies to prevent BVDV in South Korea.

Microbial isolates and antibiotic sensitivity in patients hospitalized with odontogenic infections at a tertiary center over 10 years

  • Gyu-Beom Kwon;Chul-Hwan Kim
    • Journal of the Korean Association of Oral and Maxillofacial Surgeons
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    • 제49권4호
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    • pp.198-207
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    • 2023
  • Objectives: This study investigated causative strains and their antibiotic sensitivity in patients who were hospitalized for maxillofacial odontogenic infections at a tertiary center in South Korea over the past 10 years with the aim of providing guidelines for the selection of appropriate empirical antibiotics. Materials and Methods: Patients with head and neck fascial space abscesses due to odontogenic infections who underwent incision and drainage surgery with pus culture tests between 2013 and 2022 at the Department of Oral and Maxillofacial Surgery, Dankook University Hospital were included. The bacterial isolates and antibiotic sensitivity of each strain were analyzed for 2013-2022, 2013-2017, and 2018-2022. The affected fascial spaces were classified into primary, secondary, and deep neck spaces. Results: In the 192 patients included in this study, 302 strains were detected. Viridans streptococcus had the highest frequency (51.7%), followed by Prevotella spp. (16.9%), Staphylococcus spp. (5.6%), and Klebsiella pneumoniae (4.6%). The identification rate of viridans streptococcus significantly increased from 41.8% in 2013-2017 to 60.9% in 2018-2022. Viridans streptococcus showed an antibiotic sensitivity of 80.5% to ampicillin; the sensitivity to penicillin antibiotics decreased over the study period. Antibiotic susceptibility was approximately 94% for third-generation cephalosporins. K. pneumoniae, which was identified at a high percentage in patients with deep neck space infection, showed increasing antibiotic resistance to most antibiotics over the study period. Conclusion: Viridans streptococcus was identified in head and neck fascial space abscesses with the highest frequency. Empirical antibiotics should be effective against this strain; penicillin antibiotics are considered inappropriate. For effective treatment of deep neck space abscesses, bacterial culture and antibiotic sensitivity tests performed as soon as possible are essential.

근권미생물과 토양병방제 -유용길항균이 인삼근부병원에 미치는 영향- (Establishment of rhizosphere microbes for plant protection on soil-borne diseases -Benificial antagonist and its mode of action toward ginseng root rot pathogen-)

  • 김성일;이민웅
    • 한국균학회지
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    • 제22권1호
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    • pp.50-61
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    • 1994
  • 토양으로부터 분리한 380개체의 균주 중 Fusarium solani에 대해 길항능력이 있는 방선균 및 세균 42개 균주로부터 길항작용이 큰 균주로 CHA 1과 5-PFHR 6을 공시하여 동정한 결과 각각 Promicromonospora sp.와 Pseudomonas pseudoalcaligenes로 동정되었다. PDA 평판배지상에서 두 균주는 모두 F. solani의 저해작용으로 균사의 길이 생장억제, 비정상적인 균사의 분지, 세포벽 분해에 의한 돌기형성 등이 관찰되었다. F. solani 포자발아에 미치는 길항균주의 배양여과액의 작용으로 감자즙액 배지나 nutrient broth에 배양한 여과액은 포자발아 억제력이 높아 14.3%의 낮은 발아율을 보였으며, 토양침출액 단독 또는 두 영양배지에 토양침출액을 첨가하여 준비한 배양 여과액에서의 발아율은 85% 이상으로 포자발아가 촉진되었으나 S-PFHR 6의 경우 두 영양배지에 소량의 토양침출액을 첨가한 배앙여과액에서 4%의 발아율을 보였다. 자연토양에서 대형포자는 19.4%, 후막포자는 17.7%가 발아하였으나 증기살균 토양에서의 발아율은 79.7% 이상으로 증가하였다. 자연토양에 공시길항균 CHA 1과 S-PFHR 6의 균체를 처리하면 토양 정균력이 증가되어 F. solani의 대형 포자 발아율은 각 처리구에서 각각 14.7%, 11.7%로 감소하였다. 길항균을 처리한 토양에 glucose와 asparagine을 처리하면 토양의 정균력이 점차 해소되어 대형포자의 발아율은 48.0% 이상으로 증가하였다. 공시균주의 2차 대사산물에 의한 길항작용으로 두 균주의 배양여과액을 토양에 처리한 경우 CHA 1의 배앙여과액을 처리한 토양에서의 F. solani 대형포자의 발아율은 9.3%, 5-PFHR 6 처리구에서의 발아율은 38.0%가 되었다. F. solani의 후막포자는 공시길한균주의 균체나 배양여과액 처리구에서의 발아율이 자연토양에서의 발아율보다 낮았으며 이러한 현상은 영앙원을 첨가해 주어도 변하지 않았다.

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사구에 서식하는 단자엽식물로부터 식물 생장 촉진 활성 내생 진균류의 분리 (Isolation of Endophytic Fungi Capable of Plant Growth Promotion from Monocots Inhabited in the Coastal Sand Dunes of Korea)

  • ;;임순옥;이인중;서종철;추연식;진익렬;김상달;이인구;김종국
    • 생명과학회지
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    • 제18권10호
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    • pp.1355-1359
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    • 2008
  • 내생성 진균류는 초본류의 식물체 내에 주로 서식하며, 식물의 병원균으로부터 숙주를 보호할 뿐만 아니라, 식물 생육에 유리하게 작용하는 다양한 대사 산물을 생산한다. 매우 흔히 접할 수 있는 사구식물의 뿌리로부터 49종의 균류를 분리하여 식물 생장 촉진 활성이 있는 균주를 선별하였다. 결과적으로 37균주(75.5%)는 awito-c 벼의 생육을 촉진하였으며, 11균주(22.5%)는 생육을 저해하였으며, 1균주(2%)는 생육에 아무런 영향을 미치지 않았다. Gibberella fujikuroi와 증류수 및 Czapek broth 배지를 control 로 사용하여 실험을 수행하였다. 결론적으로 사구식물 내생균류의 많은 부분은 숙주식물의 생육과 발달을 조장하는 대사 산물을 생산함을 알 수 있었다.

추백리 혈청검사 양성 산란계로부터 Salmonella속균 분리 (Isolation of Salmonella from the layer chickens reacting in pullorum-typhoid agglutination test)

  • 류재윤;전무형;장경수;손현수;곽학구;박경재;우용구
    • 한국동물위생학회지
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    • 제22권3호
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    • pp.221-237
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    • 1999
  • To investigate the specificity of rapid slide agglutination test for pullorum-gallinarum diseases and to obtain a basic data for avian salmonellosis control, salmonella isolation was peformed for the layer chickens positively reacted in pullonlm-typhoid agglutination test. The biochemical, serological and antimicrobial properties of the isolates were examined. The results obtained through this study were summarized as follows; 1. Of 2,384 chickens tested by the agglutination test, 606 chickens (25.4%) were positive reactors. 154 of 606 reactors and 49 of the non-reacting chickens were investigated for salmonella isolation, resulting in isolation of 68 strains of salmonellae from 27 chickens. 2. By organs, the isolation frequency from liver, cecum, spleen, ovary and gall bladder showed 8.9% (18 strains), 8.9% (18 strains), 7.4% (15 strains), 4.4% (9 strains) and 3.9% (8 strains), respectively. 3. By culture medium the combination of selenite broth and MacConkey agar revealed the highest isolation rate and the enrichment culture by delayed secondary enrichment culture method was found the most effective for salmonella isolation. 4. The serotypes of 68 salmonella isolates were identified as 3 strains of S pullorum, 24 strains of S gallinarum, 15 strains of S typhimurium, 8 strains of S enteritidis, 7 strains of S paratyphi A, 5 strains of S typhimurium and 6 strains of the other salmonellae. 5. The serotypes of 8 salmonella strains isolated from 49 chickens non-reacting in pullorum-typhoid agglutination test were identified as 3 strains of S typhimurium and 5 strains of S infantis. 6. When 24 chickens of which 68 strains of salmonellae isolated were examined by microplate agglutination test, the average antibody titer for pullorum antigen was $2^{5.25}$. The chickens at antibody titer between $2^3$ and $2^5$ showed the higher frequency of isolation as compared with the chickens at the other titers. 7. When salmonella isolates were tested the antimicrobial drug sensitivity by disk diffusion method, S paratyphi A were highly sensitive by 100% to ATM and GM, S typhimurium, by 88% to AM, CIP, IMP and TN, S infantis, by 100% to AM, CRO, ENR and PIP, S enteritidis,by 100% to IMP and PIP, S pullorum, by 100% to ATM, CRO, ENR and PIP and S gallinarum, by 92% to CRO, CIP and PIP.

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Integration of Bological and Chemical Methods for the Control of Pepper Gray Mold Rot Under Commercial Greenhouse Conditions

  • Park, Seon-Hee;Bae, Dong-Won;Lee, Joon-Taek;Chung, Sung-Ok;Kim, Hee-Kyu
    • The Plant Pathology Journal
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    • 제15권3호
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    • pp.162-167
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    • 1999
  • Integration of microbial antagonists with fungicides was tried to control the gray mold caused by Botrytis cinerea on pepper in greenhouse conditions and to reduce fungicide uses. All of the selected bacterial antagonists, Bacillus amyloliquefaciens BL3, Paenibacillus polymyxa BL4, and Pseudomonas putida Cha94, completely inhibited the conidial germination of B. cinerea until 30 days after treatment. However, bacterial colonization of pepper phylloplane was poor in BL4, while the other bacterial isolates and the fungal antagonist Trichoderma harzianum TM colonized well on the phylloplane, maintaining the population density of 104-105 cfu/g until 15 days after microbial treatments. Out of 13 kinds of selected fungicides used for gray mold diseases, polyoxin B and BKF 1995 showed the most discriminatory activity on the fungal growth between B. cinerea and TM. TM grew readily on the media containing those fungicides, while B. cinerea showed poor or no mycelial growth on them. The selected fungicides and antagonists alone reduced incidence of gray mold on pepper, showing disease indices of about 2.4 to 3.0, while its was increased up to 4.2 in the untreated control. Alternate treatments with the antagonists and 2-fold diluted fungicides inhibited the disease incidence as much as the antagonists or fungicides alone, and reduced the secondary inoculum more than the single treatments. This suggests that integration of antagonists and fungicides may be an efficient way to reduce fungicide sprays with reliable control efficacy of the disease. However, there was not much difference in the early and mid-term disease progress among the treatments and the untreated control, probably due to extremely favorable environmental conditions for the disease development in this experiment.

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Biosynthesis of Bile Acids in a Variety of Marine Bacterial Taxa

  • Kim, Doc-Kyu;Lee, Jong-Suk;Kim, Ji-Young;Kang, So-Jung;Yoon, Jung-Hoon;Kim, Won-Gon;Lee, Choong-Hwan
    • Journal of Microbiology and Biotechnology
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    • 제17권3호
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    • pp.403-407
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    • 2007
  • Several marine. bacterial strains, which were isolated from seawater off the island Dokdo, Korea, were screened to find new bioactive compounds such as antibiotics. Among them, Donghaeana dokdonensis strain DSW-6 was found to produce antibacterial agents, and the agents were then purified and analyzed by LC-MS/MS and 1D- and 2D-NMR spectrometries. The bioactive compounds were successfully identified as cholic acid and glycine-conjugated glycocholic acid, the $7{\alpha}$-dehydroxylated derivatives (deoxycholic acid and glycodeoxycholic acid) of which were also detected in relatively small amounts. Other marine isolates, taxonomically different from DSW-6, were also able to produce the compounds in a quite different production ratio from DSW-6. As far as we are aware of, these bile acids are produced by specific members of the genus Streptomyces and Myroides, and thought to be general secondary metabolites produced by a variety of bacterial taxa that are widely distributed in the sea.

Antioxidant Caffeic acid Derivatives from Leaves of Parthenocissus tricuspidata

  • Saleem, Muhammad;Kim, Hyoung-Ja;Jin, Changbae;Lee, Yong-Sup
    • Archives of Pharmacal Research
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    • 제27권3호
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    • pp.300-304
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    • 2004
  • Five caffeic acid derivatives; methyl ester of caffeoylglycolic acid (1), dimethyl ester of caffeoyltartaric acid (2), dimethyl ester of caffeoyltartronic acid (3), monomethyl ester of caffeoyltartronic acid (4), methyl ester of caffeic acid (5), and some other secondary metabolites including; quercetin, quercetin 3-O-$\beta$-D-glucuronide methyl ester, kaempferol, 3,5,7,4'-O-tetramethylkaempferol, $\beta$-sitosterol glucoside, 2$\alpha$-hydroxyursolic acid and 2,24-dihydroxyursolic acid, have been isolated and characterized. All the isolated compounds were characterized with the help of NMR spectroscopy and mass spectrometry. Structure of compound 3 was also confirmed by a single X-ray crystallographic technique. Isolates were evaluated for anti-oxidant activities and most of the tested compounds were found to be potent in DPPH free radical scavenging ($IC_{50}{\;}={\;}4.56-14.17{\;}{\mu\textrm{g}}/mL$) and superoxide anion scavenging ($IC_{50}{\;}={\;}0.58-7.39{\;}{\mu\textrm{g}}/mL$) assays.

Formulation of a novel bacterial consortium for the effective biodegradation of phenol

  • Dhanya, V.
    • Advances in environmental research
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    • 제9권2호
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    • pp.109-121
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    • 2020
  • Phenol is frequently present as the hazardous pollutant in petrochemical and pesticide industry wastewater. Because of its high toxicity and carcinogenic potential, a proper treatment is needed to reduce the hazards of phenol carrying effluent before being discharged into the environment. Phenol biodegradation with microbial consortium offers a very promising approach now a day's. This study focused on the formulation of phenol degrading bacterial consortium with three bacterial isolates. The bacterial strains Bacillus cereus strain VCRC B540, Bacillus cereus strain BRL02-43 and Oxalobacteraceae strain CC11D were isolated from detergent contaminated soil by soil enrichment technique and was identified by 16s rDNA sequence analysis. Individual cultures were degrade 100 μl phenol in 72 hrs. The formulated bacterial consortium was very effective in degrading 250 μl of phenol at a pH 7 with in 48 hrs. The study further focused on the analysis of the products of biodegradation with Fourier Transform Infrared Spectroscopy (FT/IR) and Gas Chromatography-Mass Spectroscopy (GC-MS). The analysis showed the complete degradation of phenol and the production of Benzene di-carboxylic acid mono (2-ethylhexyl) ester and Ethane 1,2- Diethoxy- as metabolic intermediates. Biodegradation with the aid of microorganisms is a potential approach in terms of cost-effectiveness and elimination of secondary pollutions. The present study established the efficiency of bacterial consortium to degrade phenol. Optimization of biodegradation conditions and construction of a bioreactor can be further exploited for large scale industrial applications.

영지버섯(Ganoderma lucidum)으로 부터 분리한 이차대사산물 및 이들의 항 염증 활성 (Secondary Metabolites Isolated from Ganoderma lucidum and Their Anti-inflammatory Activity)

  • 김혜지;구만형;이준혁;서승석;윤의중
    • 생약학회지
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    • 제50권3호
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    • pp.232-238
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    • 2019
  • Phytochemical study of Ganoderma lucidum (Polyporaceae) let to the isolation of five lanostane triterpenoid (1-5), along with two nitrogen derived phenolic compounds, N-phenylethylformamide (6) and N-acetylphenethylamine (7). The structures of the compounds were determined by 1D and 2D NMR, and MS experiments, as well as by comparison of their data with published values. Compounds 6 and 7 were isolated for the first time from the genus Ganoderma and this species. All the compounds were evaluated for cancer chemopreventive potential based on their ability to inhibit nitric oxide (NO) production induced by lipopolysaccharide (LPS) in mouse macrophage RAW 264.7 cells in vitro. Among the isolates, compounds 2 and 3 showed moderate inhibitory activity against NO production.