• Title/Summary/Keyword: screening of strain

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Screening of Bacteriocin-producing Enterococcus faecalis Strains for Antagonistic Activities against Clostridium perfringens

  • Han, Sun-Kyung;Shin, Myeong-Su;Park, Ho-Eun;Kim, So-Young;Lee, Wan-Kyu
    • Food Science of Animal Resources
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    • v.34 no.5
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    • pp.614-621
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    • 2014
  • This study was conducted to isolate and characterize bacteriocin-producing bacteria against Clostridium perfringens (C. perfringens) from domestic animals to determine their usefulness as probiotics. Bacteriocin-producing bacteria were isolated from pig feces by the spot-on-lawn method. A total of 1,370 bacterial stains were isolated, and six were tentatively selected after identifying the inhibitory activity against the pathogenic indicator C. perfringens KCTC 3269 and KCTC 5100. The selected strains were identified as Enterococcus faecalis (E. faecalis) by 16s rRNA sequencing. Most of the isolated bacterial strains were resistant to 0.5% bile salts for 48 h and remained viable after 2 h at pH 3.0. Some E. faecalis also showed strong inhibitory activity against Listeria monocytogenes KCTC 3569, KCTC 3586 and KCTC 3710. In the present study, we finally selected E. faecalis AP 216 and AP 45 strain based on probiotic selection criteria such as antimicrobial activity against C. perfringens and tolerance to acid and bile salts. The bacteriocins of E. faecalis AP 216 and AP 45 strains were highly thermostable, showing anticlostridial activities even after incubation at $121^{\circ}C$ for 15 min. These bacteriocin-producing bacteria and/or bacteriocins could be used in feed manufacturing as probiotics as an alternative to antibiotics in the livestock industry.

Isolation of Bioflocculant-Producing Microorganism and Its Culture Characteristics (응집제 생산균주의 분리 및 배양특성)

  • 이태호;이순호;권기석;이재동;이문호;오희목;윤병대
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.24 no.5
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    • pp.790-795
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    • 1995
  • Flocculant-producing microorganisms were isolated from soil samples using kaoline as the flocculating test material. One strain that had high flocculating activity among them was selected and identified as Arcuadendron sp. TS-49. The favorable medium for production of the flocculant was 3% glucose, 0.2% yeast extract, 0.1% $NH_4Cl$, 0.01% $MgSO_4$, and 0.05% $MnSO_4$ in 150ml of T.W. with initial pH 7.0.The optimum culture temperature and pH were $30^{\circ}C$ and pH 7.0, respectively. The flocculant activity was observed most highly after 4 to 5 days of cultivation at the optimum condition and decreased significantly with the lapse of cultivation time. The flocculant was produced constituently and seemed to be degraded for ressimilation during cultivation. The productivity achieved by this system was about ten-fold higher than that of scrrening mediuim. This bioflocculant flocculated all tested solids, including various microorganisms and organic/inorganic compounds. Several qualitative analyses of the bioflocculant showed that it was a kind of glycoprotein containing sugars and protein.

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Development and Application of Acute Bioassay Method on Solid Samples using Bioluminescence Producing Bacteria (박테리아 발광 특성을 이용한 고형시료 급성 독성법 연구 및 적용)

  • Ko, Kyung-Seok;Kong, In-Chul;Jung, Hong-Gyung;Ro, Yul
    • Journal of Soil and Groundwater Environment
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    • v.12 no.6
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    • pp.46-52
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    • 2007
  • A toxicity method using bioluminescence producing bacteria, Escherichia coli DH5 RB1436, was developed and applied on solid environmental samples. In the assay, 1 g soil sample was mixed with 4 ml RB1436 strain. Sets amended with p-buffer were employed for control in soil test, showing approximately 108% of sets amended with combusted soils. Measurable differences were observed between relatively more polluted groups (HP) and less polluted groups (LP) of soil samples, showing average toxicity 43 and 26%, respectively, in direct soil toxicity test. $EC_{50}$'s for all soil groups appeared in the range of $1.8{\sim}4.6\;g$, but those of sediments from dam reservoir and refuses were below 0.22 g. This developed bioassay should prove useful as a screening test for toxicity in various types of environmental solid samples.

Vegetative Incompatibility and Hypovirulence Conversion of Cryphonectria(Endothia) parasitica(Murr.)Barr (Cryphonectria(Endothia) parasitica(Murr.)Barr의 체세포(體細胞) 불화합성(不和合性)과 저병원성(低病原性) 변환(變換))

  • Lee, Jong-Kyu
    • The Korean Journal of Mycology
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    • v.22 no.4
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    • pp.343-349
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    • 1994
  • One hundred and two virulent(V) strains of Cryphonectria parasitica were isolated from the cankers of American chestnut (Castanea dentata) trees in western Massachusetts, USA. The diversity of vegetative compatibility groups (VCGs) of C. parasitica was investigated. One hundred and two strains represented 54 VCGs; 38 VCGs had only one strain each, 6 VCGs had 2 strains each, and 10 most common VCGs had 52 strains. Great diversity in VCGs may due to the increasing numbers of VCGs with time since the pathogen has been in Massachusetts for 80 years. Ten vegetative compatibility representative strains were selected from the 10 most common VCGs and converted to hypovirulent (H) strains through the pairing and hyphal anastomosis of H strains (4 strains with French dsRNA elements and 17 strains with Italian dsRNA elements). All of the 10 representative strains were converted to H strains by at least more than one of the H strains.

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Screening of MRSA (Methicilline Resistant Staphylococcus Aureus) and seb Gene in Producing Strains Isolated from Food Service Environment of Elementary Schools (초등학교 급식 환경에서의 메치실린 내성 황색포도상구균(MRSA)과 seb gene의 검색)

  • 하광수;박선자;심원보;정덕화
    • Journal of Food Hygiene and Safety
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    • v.18 no.2
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    • pp.79-86
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    • 2003
  • Most of food poisoning is frequently raised from mass catering. Especially, staphylococci takes the large part of pathogenic agents which are related to the hygienic condition. Among total 98 samples, four staphylococci were isolated from food service environment such as drinking water (A), hands (D), refrigerator and apron (E) of 5 elementary school (A, B, C, D, E) in Gyeongnam Province. These isolated strains are characterized as 1 MRCNS (Methicilline Resistant Coagulase Negative Staphylococcus aureus) and 3 MSCPS (Methicilline Sensitive Coagulase positive Staphylococcus aureus). Also, production of enterotoxin B (sob gene) were examined by PCR which has known as a big problem because of their temperature resistance. Hence, PCR was performed on isolated 4 staphylococci. The all 4 isolated Staphylococcus aureus have 477 bp of seb gene. Antibiotics susceptibility test was completed on PCR detected strains. All strains were fully resistance to ampicillin and penicillin. The drinking water of A place has resistance to oxacilline, therefore this strain turned out to be MRSA (Methicilline Resistant Staphylococcus Aureus).

Screening and Optimal Culture Conditions of Antibiotic-Producing Actinomycetes B-51 for Multidrug Resistant Acinetobacter baumannii (다제내성 Acinetobacter baumannii에 유효한 방선균 B-51의 탐색 및 이 균주가 생산하는 항생물질 발효 최적 배양 조건)

  • Rhee, Moon-Soo;Kim, Gwan-Pil;Bang, Byung-Ho
    • The Korean Journal of Food And Nutrition
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    • v.23 no.1
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    • pp.63-69
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    • 2010
  • With the increase of the use of antibiotics and invasive procedures, infections caused by multidrug-resistant Acinetobacter baumannii(MRAB) are increasing. We screened the antibiotic producing strain B-51 for antibacterial activity against MRAB from the soils and studied the effects of culture medium on the antibiotic production of B-51. The medium conditions for maximum antibiotic productivity of B-51 was 2% glycerol, 0.5% soybean meal, 0.01% $CaCl_2$, 0.01% $MgSO_4{\cdot}7H_2O$ and 0.01% $KH_2PO_4$ at an initial pH of 6.0, at $30^{\circ}C$ for 76 h.

New Algicidal Compounds from a Marine Algicidal Bacterium against Cochlodinium polykrikoides

  • Jeong, Seong-Yun;Kim, Min-Ju;Lee, Sang-Youb;Son, Hong-Joo;Lee, Sang-Joon
    • Proceedings of the Korean Environmental Sciences Society Conference
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    • 2006.11a
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    • pp.285-289
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    • 2006
  • In screening of algicidal bacteria, we isolated a marine bacterium which had potent algicidal effects on harmful algal bloom (HAB) species. This organism was identified as a strain very close to Bacillus subtilisby 16S rRNA gene sequencing. This bacterium, Bacillus sp. SY-1, produces very active algicidal compounds against the harmful dinoflagellate Cochlodinium polykrikoides. We isolated three algicidal compounds (MS 1056, 1070, 1084) and identified them by amino acid analyses, fast atom bombardment mass spectrometry (FAB-MS), infrared spectroscopy (IR), $^1H$, $^{13}C$, and extensive two-dimensional nuclear magnetic resonance (2D NMR) techniques including $^1H-^{15}N$ HMBC analysis. One of them, MS 1056, contains a b-amino acid residue with an alkyl side chain of $C_{15}$. MS 1056, 1070, and 1084 showed algicidal activities against C. polykrikoides with an $LC_{50}$ (6 hrs) of 2.3, 0.8, $0.6\;{\mu}g/ml$, respectively. These compounds also showed significant algicidal activities against other harmful dinoflagellates and raphidophytes. In contrast, MS 1084 showed no significant growth inhibition against various organisms coexisting with HAB species in natural environments, including bacteria, eukaryotic microalgae, and cyanobacteria, although it inhibited growth of some fungi and yeasts. These observations imply that algicidal bacterium Bacillus sp. SY-1 and its algicidal compounds could play an important role in regulating the onset and development of HABs in the natural environments.

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Screening of Mutagenic Activity of Extracts from Croaker and Pork Cooked by Various Cooking Methods (여러가지 조리방법으로 조리된 조기와 돼지고기의 돌연변이원성의 검색)

  • 이은경;이임선;신남희;정승희;구성자
    • Korean journal of food and cookery science
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    • v.11 no.1
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    • pp.77-82
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    • 1995
  • Croaker and pork were cooked by four kinds of methods(boiled, broiled, deep fried, pan fried) and their extracts were extracted with 50% methanol. The Ames test were performed on these methanol extracts, employing Salmonella typhimurium tester strain TA98 and TA100, with and without S9 mix and after nitrite treatment. The methanol extracts of cooked croaker and pork showed mutagenicity between original weight 0.0125 g/plate and 0.1 g/plate in all strains and induced a higher mutagenicity in all strains with S9 mix than without S9 mix. In all kinds of cooking methods, pork extracts showed higher mutagenicities than croaker extracts and especially the extract of pan fried croaker and pork showed high mutagenicities with S9 mix. The extract after nitrite treatment showed higher mutagenicities than that after non treatment and after treatment with nitrite, the mutagenicities of extracts were higher on TA98 than TA100.

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Screening for Ginseng-Fermenting Microorganisms Capable of Biotransforming Ginsenosides (Ginsenoside 전환이 가능한 인삼 발효 미생물의 선별)

  • Kim, Hee-Gyu;Kim, Ki-Yeon;Cha, Chang-Jun
    • Korean Journal of Microbiology
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    • v.43 no.2
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    • pp.142-146
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    • 2007
  • Panax ginseng has been drawing world-wide attention since it was used for medicinal purposes and its effects was discovered in scientific manners. However, it is necessary to develope new ginseng products as functional foods to compete with western ginseng. Fermented ginseng could be an excellent solution, where useful probiotics are provided and ginsenosides are specifically transformed to functional forms. In this study, we investigated the growth and ginsenoside biotransformation by 21 Bacillus strains isolated from Chongkukjang and 12 lactic acid bacteria. 2.5% (w/v) and 1% (w/v) of ginseng were used in culture media containing only ginseng powder as a sole nutrient source, and their biotransformation abilities were tested after the growths were checked. All used Bacillus strains and lactic acid bacteria were able to grow well in ginseng powder media at higher levels than $10^{7}\;CFU/ml$. Most of Bacillus strains displayed ginsenoside transformation in a strain-specific manner. Therefore, the results of this study demonstrated that the strains tested in this study could be used as potential starters for the ginseng fermentation.

Screening of Bacterial Antagonists to Develop an Effective Cocktail against Erwinia amylovora

  • Choi, Dong Hyuk;Choi, Hyun Ju;Kim, Yeon Ju;Lim, Yeon-Jeong;Lee, Ingyeong;Park, Duck Hwan
    • Research in Plant Disease
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    • v.28 no.3
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    • pp.152-161
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    • 2022
  • Several types of chemical bactericides have been used to control fire blight. However, their excessive usage leads to environmental deterioration. Therefore, several researchers have analyzed antagonistic microorganisms as promising, effective, and safe biological control agents (BCAs). The primary aim of this study was to screen for potential antagonistic bacteria that suppress Erwinia amylovora. Among the 45 isolates studied, 5 strains showed the largest inhibition zone against E. amylovora. 16S rRNA gene sequencing identified them as Bacillus amyloliquefaciens (KPB 15), B. stratosphericus (KPB 21), B. altitudinis (KPB 25), B. safensis (KPB 31), and B. subtilis (KPB 39). KPB 25 and 31 reduced the lesion size of fire blight by 50% in immature apple fruits, and did not show antagonism against each other. Therefore, KPB 25 and 31 were selected to develop an antagonistic mixture against fire blight. Although the mixture with KPB 25 and 31 showed a slightly increased ability to reduce lesion size on immature fruits, they did not exhibit a synergistic effect in reducing E. amylovora population compared to each strain alone. Nevertheless, we have identified these two strains as useful and novel BCAs against fire blight with additional benefits safety and potential in developing a mixture without loss of their activity, owing to the absence of antagonism against each other.