• 제목/요약/키워드: sRNA mycovirus

검색결과 3건 처리시간 0.022초

Characterization and RT-PCR Detection of dsRNA Mycoviruses from the Oyster Mushroom, Pleurotus ostreatus

  • Seo, Jang-Kyun;Lim, Won-Seok;Jeong, Ji-Hye;Yoo, Young-Bok;Yie, Se-Won;Kim, Kook-Hyung
    • The Plant Pathology Journal
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    • 제20권3호
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    • pp.200-205
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    • 2004
  • The partial nucleotide sequences of the genomic dsRNA mycovirus infecting Pleurotus ostreatus isolates ASI2223 and Suhan were determined and compared with those of mycoviruses belonging to partitiviruses and totiviruses. Partial nucleotide sequences of the purified dsRNA from ASI2223 and Suhan showed RNA-dependent RNA polymerase sequences that are closely related to those of partitiviruses, including Fusarium poae virus 1, Fusarium solani virus, Rhizoctoniasolani virus, Discula destructiva virus 2, and Oyster mushroom isometric virus 2. Specific primers were designed for RT-PCR detection of dsRNA viruses from the P. ostreatus isolate ASI2223 and Suhan. Two virus specific primer sets were found to specifically detect each virus among six sets of designed oligonucleotide primers. Collectively, these results suggest that dsRNA mycoviruses from P. ostreatus isolates ASI2223 and Suhan belong to the family Partitiviridae, although, they are not the same virus species. Our results also suggest that these virus-specific primer sets can be employed for the specific detection of each viral sequence in infected tissues.

Complete genome sequence of Fusarium hypovirus DK2l strain and genomic diversity of dsRNA mycoviruses isolated from Fusarium graminearum

  • Lim, Won-Seok;Chu, Yeon-Mee;Lee, Yin-Won;Kim, Kook-Hyung
    • 한국식물병리학회:학술대회논문집
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    • 한국식물병리학회 2003년도 정기총회 및 추계학술발표회
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    • pp.117.3-118
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    • 2003
  • We tested for the presence of double-stranded RNA (dsRNA) mycovirus in 827 Fusarium graminearum isolated from diseased barley and maize. dsRNA mycoviruses with various sizes were isolated. Of them, it was previously reported that dsRNA from DK2l isolate had pronounced morphological changes, including reduction in mycelial growth, increased to red pigmentation, reduced virulence and sporulation. (Chu et al., Appl. Environ. Microbiol. 2002). For better understanding of this hypovirulence associated with DK2l dsRNA virus, we determined the complete nucleotide sequence of dsRNA genome and named Fusarium hypovirus DK2l strain (Fhv-DK2l ). Genomic RNA of Fhv-DK2l was determined to be 6625 nucleotides in length excluding the poly (A) tail and contained three putative open reading frame. RNA-dependent RNA polymerase (RdRp) and helicase domain were expected in ORF A, 54 to 4709 nucleotide position. ORE B, 4752 to 5216 nucleotide position, and ORF C, 5475 to 6578 nucleotide position, were predicted to encode 16.7kDa and 41.3kDa protein respectively each. We could not detect any conserved domains from these two proteins. Phylogenetic analysis showed Fhv-DK2l was related to Cryphonectria hypovirus 3. Ten additional isolates were found that were infected with dsRNA mycoviruses. These mycoviruses contain 2 to 4 different segments of dsRNAs with the size range of approximately 1.7 to 10-kbp in length. The presence of dsRNAs isolates did not affect colony morphology and were transmissible through conidia and ascospore with incidence of 30-100%. These results indicate that there is genomic diversity of dsRNA mycoviruses that infect F. graminearum isolates and that impact of virus infection on host's morphology and virulence is determined by the interaction between dsRNAs and the fungal host, not by the mere presence of the dsRNAs

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표고에서의 RNA 바이러스 수직감염 (Vertical Transmission of RNA Mycoviruses in Lentinula edodes)

  • 김은진;박미정;김민준;정연석;장영선;가강현
    • 한국균학회지
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    • 제50권4호
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    • pp.263-274
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    • 2022
  • 표고는 중요한 상업용 버섯이며, 표고에서의 바이러스 감염에 대한 여러 보고가 있었다. 톱밥 재배 품종인 산백향(NIFoS 2778)과 태향고(NIFoS 4317)에 대한 바이러스 검출 결과, 이들이 2개의 mycoviruses (LeV-HKB 및 LeNSRV1)에 감염되어 있음을 확인하였다. 각 품종의 자실체에서 분리된 담자포자에서 유래한 80개의 단핵균사에서 바이러스 감염을 조사한 결과, 대부분의 단 핵균사들이 바이러스에 감염되어 있었으며, LeV-HKB와 LeNSRV1의 수직감염률에 차이가 있었다. LeV-HKB가 LeNSRV1 보다 높은 수직감염률을 나타낸 것이다. 따라서 mycovirus의 수직 감염 기작이 바이러스 종에 따라 다른 것으로 보인다. 다음으로, 담자포자 유래 단핵균사들의 생장속도를 조사하여 바이러스 감염과 생장속도의 상관관계를 조사하였다. 바이러스 감염과 균사 생장속도 사이에 통계적으로 유의한 상관관계가 없었지만, 감염된 바이러스의 종류가 늘어날수록 생장속도가 감소하는 경향을 확인하였다. 본 연구는 mycovirus의 수직 감염 기작을 이해하는 데 기여하고, 바이러스에 감염되지 않은 단핵균사를 이용한 무바이러스 품종 개발을 촉진하는 데 기여할 수 있을 있을 것 기대된다.