• Title/Summary/Keyword: root-soil model

Search Result 162, Processing Time 0.034 seconds

Combined Application Effects of Arbuscular Mycorrhizal Fungi and Biochar on the Rhizosphere Fungal Community of Allium fistulosum L.

  • Chunxiang Ji;Yingyue Li;Qingchen Xiao;Zishan Li;Boyan Wang;Xiaowan Geng;Keqing Lin;Qing Zhang;Yuan Jin;Yuqian Zhai;Xiaoyu Li;Jin Chen
    • Journal of Microbiology and Biotechnology
    • /
    • v.33 no.8
    • /
    • pp.1013-1022
    • /
    • 2023
  • Arbuscular mycorrhizal fungi (AMF) are widespread soil endophytic fungi, forming mutualistic relationships with the vast majority of land plants. Biochar (BC) has been reported to improve soil fertility and promote plant growth. However, limited studies are available concerning the combined effects of AMF and BC on soil community structure and plant growth. In this work, a pot experiment was designed to investigate the effects of AMF and BC on the rhizosphere microbial community of Allium fistulosum L. Using Illumina high-throughput sequencing, we showed that inoculation of AMF and BC had a significant impact on soil microbial community composition, diversity, and versatility. Increases were observed in both plant growth (the plant height by 8.6%, shoot fresh weight by 12.1%) and root morphological traits (average diameter by 20.5%). The phylogenetic tree also showed differences in the fungal community composition in A. fistulosum. In addition, Linear discriminant analysis (LDA) effect size (LEfSe) analysis revealed that 16 biomarkers were detected in the control (CK) and AMF treatment, while only 3 were detected in the AMF + BC treatment. Molecular ecological network analysis showed that the AMF + BC treatment group had a more complex network of fungal communities, as evidenced by higher average connectivity. The functional composition spectrum showed significant differences in the functional distribution of soil microbial communities among different fungal genera. The structural equation model (SEM) confirmed that AMF could improve the microbial multifunctionality by regulating the rhizosphere fungal diversity and soil properties. Our findings provide new information on the effects of AMF and biochar on plants and soil microbial communities.

A Study on the Injection Characters of The Back Side Grouting Method by a Model Test (모형실험을 통한 배면지수 그라우팅기법에 관한 연구)

  • Chun, Byung-Sik;Choi, Choon-Sik
    • Journal of the Korea institute for structural maintenance and inspection
    • /
    • v.6 no.2
    • /
    • pp.175-182
    • /
    • 2002
  • The cement injection technology on the purpose of ground reinforcement and cut-off has been used in construction sites until now. However, recently it is applied to prevent leakage of underground structure. In this study, applicability of the back side waterproof grouting method was verified through performing field model tests and reviewing case histories. From the results of this study, injection shape of the back side waterproof grouting method was appeared to be root type, and waterproof effect by injection of cement grout material was excellent because grout material infiltrated into boundary between wall of structure and back side ground to be waterproof layer. Components influencing infiltration of injection material are type of soil and degree of compaction. For effective injection, injection pressure has to vary gradually from high pressure to low pessure and small quantity of injection material has to be injected for long times. Also, spacing of injection hole must be designed considering condition of back side ground, injection area, W/C ratio, the number of injection and injection pattern properly.

Assessing the EPIC Model for Estimation of Future Crops Yield in South Korea (미래 작물생산량 추정을 위한 EPIC 모형의 국내 적용과 평가)

  • Lim, Chul-Hee;Lee, Woo-Kyun;Song, Yongho;Eom, Ki-Cheol
    • Journal of Climate Change Research
    • /
    • v.6 no.1
    • /
    • pp.21-31
    • /
    • 2015
  • Various crop models have been extensively used for estimation of the crop yields. Compared to the other models, the EPIC model uses a unified approach to simulate more than 100 types of crops. It has been successfully applied in simulating crop yields for various combinations of weather conditions, soil properties, crops, and management schemes in many countries. The objective of this study was to estimate the rice and maize yield in South Korea using the EPIC model. The input datasets for the 30 types in the 11 categories were created for the EPIC model. The EPIC model simulated rice and maize yields. The performance of the EPIC model was evaluated with the goodness-of-fit measures including Root Mean Square Error (RMSE), Relative Error (RE), Nash-Sutcliffe Efficiency Coefficient (NSEC), Mean Absolute Error (MAE), and Pearson Correelation Coefficient (r). The rice yield showed to more high accuracy than maize yield on four type of method without NSEC. Theses results showed that the EPIC model better simulated rice yields than maize yields. The results suggest that the EPIC crop model can be useful to estimate crop yield in South Korea.

Evaluation of near-realtime weekly root-zone Soil Moisture Index (SMI) for the extreme climate monitoring web-service across East Asia (동아시아 이상기후 감시 서비스를 위한 지면모형 기반 준실시간 토양수분지수평가)

  • Chun, Jong Ahn;Lee, Eunjeong;Kim, Daeha;Kim, Seon Tae;Lee, Woo-Seop
    • Journal of Korea Water Resources Association
    • /
    • v.53 no.6
    • /
    • pp.409-416
    • /
    • 2020
  • An extreme climate monitoring is essential to the reduction of socioeconomic damages from extreme events. The objective of this study was to produce the near-realtime weekly root-zone Soil Moisture Index (SMI) on the basis of soil moisture using the Noah 3.3 Land Surface Model (LSM) for potentially monitoring extreme drought events. The Yangtze basin was selected to evaluate the Noah LSM performance for the East Asia region (15-60°N, 70-150°E) and the evapotranspiration (ET) and sensible heat flux (SH) were compared with ET and SH from FluxNet and with ET from FluxCom, Global Land Evaporation Amsterdam Model (GLEAM), ERA-5, and Generalized Complementary Relationship (GCR). For the ET, the coefficients of determination (R2) were higher than 0.96, while the R2 value for the SH was 0.71 with slightly lower than those. A time series of the weekly root-zone SMI revealed that the regions with Extreme drought had been expanded from the northern part of East China to the entire East China between July to October 2019. The trend analysis of the number of extreme drought events showed that extreme drought events in spring had reduced in South Korea over the past 20 years, while those in fall had a tendency to increase. It is concluded that this study can be useful to reduce the socioeconomic damages resulted from climate extremes by comprehensively characterizing extreme drought events.

Microbe-Based Plant Defense with a Novel Conprimycin Producing Streptomyces Species

  • Kwak, Youn-Sig
    • 한국균학회소식:학술대회논문집
    • /
    • 2015.05a
    • /
    • pp.54-54
    • /
    • 2015
  • Crops lack genetic resistance to most necrotrophic soil-borne pathogens and parasitic nematodes that are ubiquitous in agroecosystems worldwide. To overcome this disadvantage, plants recruit and nurture specific group of antagonistic microorganisms from the soil microbiome to defend their roots against pathogens and other pests. The best example of this microbe-based defense of roots is observed in disease-suppressive soils in which the suppressiveness is induced by continuously growing crops that are susceptible to a pathogen. Suppressive soils occur globally yet the microbial basis of most is still poorly described. Fusarium wilt, caused by Fusarium oxysporum f. sp. fragariae is a major disease of strawberry and is naturally suppressed in Korean fields that have undergone continuous strawberry monoculture. Here we show that members of the genus Streptomyces are the specific bacterial components of the microbiome responsible for the suppressiveness that controls Fusarium wilt of strawberry. Furthermore, genome sequencing revealed that Streptomyces griseus, which produces a novel thiopetide antibiotic, is the principal species involved in the suppressiveness. Finally, chemical-genetic studies demonstrated that S. griseus antagonizes F. oxysporum by interfering with fungal cell wall synthesis. An attack by F. oxysporum initiates a defensive "cry for help" by strawberry root and the mustering of microbial defenses led by Streptomyces. These results provide a model for future studies to elucidate the basis of microbially-based defense systems and soil suppressiveness from the field to the molecular level.

  • PDF

Estimation of Highland Kimchi Cabbage Growth using UAV NDVI and Agro-meteorological Factors

  • Na, Sang-Il;Hong, Suk-Young;Park, Chan-Won;Kim, Ki-Deog;Lee, Kyung-Do
    • Korean Journal of Soil Science and Fertilizer
    • /
    • v.49 no.5
    • /
    • pp.420-428
    • /
    • 2016
  • For more than 50 years, satellite images have been used to monitor crop growth. Currently, unmanned aerial vehicle (UAV) imagery is being assessed for analyzing within field spatial variability for agricultural precision management, because UAV imagery may be acquired quickly during critical periods of rapid crop growth. This study refers to the derivation of growth estimating equation for highland Kimchi cabbage using UAV derived normalized difference vegetation index (NDVI) and agro-meteorological factors. Anbandeok area in Gangneung, Gangwon-do, Korea is one of main districts producing highland Kimchi cabbage. UAV imagery was taken in the Anbandeok ten times from early June to early September. Meanwhile, three plant growth parameters, plant height (P.H.), leaf length (L.L.) and outer leaf number (L.N.), were measured for about 40 plants (ten plants per plot) for each ground survey. Six agro-meteorological factors include average temperature; maximum temperature; minimum temperature; accumulated temperature; rainfall and irradiation during growth period. The multiple linear regression models were suggested by using stepwise regression in the extraction of independent variables. As a result, $NDVI_{UAV}$ and rainfall in the model explain 93% of the P.H. and L.L. with a root mean square error (RMSE) of 2.22, 1.90 cm. And $NDVI_{UAV}$ and accumulated temperature in the model explain 86% of the L.N. with a RMSE of 4.29. These lead to the result that the characteristics of variations in highland Kimchi cabbage growth according to $NDVI_{UAV}$ and other agro-meteorological factors were well reflected in the model.

Effects of Reclaimed Wastewater Irrigation on Paddy Rice Yields and Fertilizer Reduction using the DSSAT Model (하수처리수의 농업용수 재이용에 따른 논벼 수확량 모의)

  • Jeong, Han-Seok;Seong, Choung-Hyun;Jang, Tae-Il;Jung, Ki-Woong;Kang, Moon-Seong;Park, Seung-Woo
    • Journal of The Korean Society of Agricultural Engineers
    • /
    • v.53 no.4
    • /
    • pp.67-74
    • /
    • 2011
  • The objectives of this study were to assess the rice yields and evaluate fertilizer reduction effect of reclaimed wastewater irrigation in paddy fields using the Decision Support System for Agrotechnology Transfer (DSSAT) v4.5 model. The experimental plots were designed, which was located near the Suwon wastewater treatment plant in Gyeonggi-do, Korea. The rice yield, irrigation amount, irrigation water quality and soil data were monitored and collected between 2006 and 2009. The DSSAT model was calibrated and validated with observed data. The methods that were used to evaluate this model were the root mean square error (RMSE), normalized root mean square error (nRMSE), and index of agreement (d). The values of RMSE, nRMSE, and d ranged from 145 to $789\;kg\;ha^{-1}$, 3.0 to 13.3 %, and 0.90 to 0.95 for the calibration period, respectively and represented from 91 to $538\;kg\;ha^{-1}$, 2.0 to 10.4 %, 0.94 to 0.98 for the validation period, respectively. Overall, this model showed good agreement with observed data of rice yields irrigated with reclaimed wastewater. The fertilizer reduction effect in paddy field of reclaimed wastewater irrigation was assessed about 60 % in 2008 and 40 % in 2009.

Model for Transport of Accidently Released Radionuclides onto Rice-Fields and its Comparison with Experimental Data (사고시 논으로 유출된 핵종 이동 모델 및 실험결과와의 비교)

  • Keum, Dong-Kwon;Lee, Han-Soo;Choi, Heui-Joo;Kang, Hee-Suk;Lim, Kwang-Muk;Choi, Young-Ho;Lee, Chang-Woo
    • Journal of Radiation Protection and Research
    • /
    • v.29 no.2
    • /
    • pp.117-127
    • /
    • 2004
  • A dynamic compartment model was developed to evaluate the transport of accidently released radionuclides onto rice-fields. In the model, the surface water compartment and shoot-base absorption were introduced to account for the effect of irrigation, which is essential to a rice cultivation. The soil mixing by plough and irrigation before transplanting rice was also considered, and the rate of root-uptake and shoot-base absorption were modeled in terms of the function of biomass. In order to test the validation of the model, it was applied to the analysis of some simulated $^{137}Cs$ deposition experiments that were performed while cultivating rice in a greenhouse using soils sampled from rice-fields around Kori, Yonggwang and Ulchin nuclear power plants. The model prediction was generally agreed within about one order of magnitude with experimental data.

Comparative Analysis of SWAT Generated Streamflow and Stream Water Quality Using Different Spatial Resolution Data (SWAT모형에서 다양한 해상도에 따른 수문-수질 모의결과의 비교분석)

  • Park, Jong-Yoon;Lee, Mi-Seon;Park, Geun-Ae;Kim, Seong-Joon
    • Proceedings of the Korea Water Resources Association Conference
    • /
    • 2008.05a
    • /
    • pp.102-106
    • /
    • 2008
  • This study is to evaluated the impact of varying spatial resolutions of DEM (2 m, 10 m, and 30 m), land use (QuickBird, 1/25,000 and Landsat), and soil data (1/25,000 and 1/50,000) on the uncertainty of Soil and Water Assessment Tool (SWAT) predicted streamflow, sediment, T-N, and T-P transport in a small agricultural watershed ($1.21\;km^2$). SWAT model was adopted and the model was calibrated for a $255.4\;km^2$ watershed using 30 m DEM, Landsat land use, and 1/25,000 soil data. The model was run with the combination of three DEM, land use, and soil map respectively. The SWAT model was calibrated for 2 years (1999-2000) using daily streamflow and monthly water quality (SS, T-N, T-P) records from 1999 to 2000, and verified for another 2 years (2001-2002). The average Nash and Sutcliffe model efficiency was 0.59 for streamflow and the root mean square error were 2.08, 4.30 and 0.70 tons/yr for sediment, T-N and T-P respectively. The hydrological results showed that output uncertainty was biggest by spatial resolution of land use. Streamflow increase the watershed average CN value of QucikBird land use was 0.4 and 1.8 higher than those of 1/25,000 and Landsat land use caused increase of streamflow.

  • PDF

Evaluation of SWAT Model Applicability for Runoff Estimation in Nam River Dam Watershed (남강댐 상류 소유역의 유출량 추정을 위한 SWAT 모형의 적용성 평가)

  • Kim, Dong-Hyeon;Kim, Sang-Min
    • Journal of The Korean Society of Agricultural Engineers
    • /
    • v.58 no.4
    • /
    • pp.9-19
    • /
    • 2016
  • The objective of this study was to evaluate the applicability of SWAT (Soil and Water Assessment Tool) model for runoff estimation in the Nam river dam watershed. Input data for the SWAT model were established using spatial data (land use, soil, digital elevation map) and weather data. The SWAT model was calibrated and validated using observed runoff data from 2003 to 2014 for three stations (Sancheong, Shinan, Changchon) within the study watershed. The $R^2$ (Determination Coefficient), RMSE (Root Mean Square Error), NSE (Nash-Sutcliffe efficiency coefficient), and RMAE (Relative Mean Absolute Error) were used to evaluate the model performance. Parameters for runoff calibration were selected based on user's manual and references and trial and error method was applied for parameter calibration. Calibration results showed that annual mean runoff were within ${\pm}5%$ error compared to observed. $R^2$ were ranged 0.64 ~ 0.75, RMSE were 2.51 ~ 4.97 mm/day, NSE were 0.48 ~ 0.65, and RMAE were 0.34 ~ 0.63 mm/day for daily runoff, respectively. The runoff comparison for three stations showed that annual runoff was higher in Changchon especially summer and winter seasons. The flow exceedance graph showed that Sancheong and Shinan stations were similar while Changchon was higher in entire fraction.